Basic Information

Insect: Drosophila planitibia
Gene Symbol: -
Assembly: GCA_035043785.1
Location: JAWNMS010000009.1:2150783-2163865[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.8 1.8e+02 2.8 2.3 3 23 307 329 305 329 0.92

2 14 1.7 1.1e+02 3.5 0.6 3 21 470 488 468 492 0.91

3 14 0.36 22 5.6 0.6 2 23 514 536 513 536 0.92

4 14 0.049 3 8.3 0.6 1 23 553 576 553 576 0.95

5 14 1.2 73 4.0 0.2 1 21 581 601 581 605 0.90

6 14 0.0071 0.44 11.0 0.1 2 23 667 689 666 689 0.95

7 14 0.71 44 4.7 0.2 1 21 694 714 694 714 0.92

8 14 0.0065 0.4 11.1 2.1 2 23 781 801 780 801 0.96

9 14 4.2e-05 0.0026 18.0 1.0 1 23 807 830 807 830 0.97

10 14 0.00029 0.018 15.3 0.4 1 23 856 878 856 878 0.98

11 14 1.1 65 4.2 0.4 1 23 885 909 885 909 0.95

12 14 0.22 14 6.3 5.6 1 23 914 938 914 938 0.97

13 14 0.002 0.12 12.7 1.8 1 23 951 973 951 973 0.98

14 14 0.0013 0.079 13.3 3.4 1 20 979 998 979 1000 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.8	1.8e+02	2.8	2.3	3	23	307	329	305	329	0.92
2	14	1.7	1.1e+02	3.5	0.6	3	21	470	488	468	492	0.91
3	14	0.36	22	5.6	0.6	2	23	514	536	513	536	0.92
4	14	0.049	3	8.3	0.6	1	23	553	576	553	576	0.95
5	14	1.2	73	4.0	0.2	1	21	581	601	581	605	0.90
6	14	0.0071	0.44	11.0	0.1	2	23	667	689	666	689	0.95
7	14	0.71	44	4.7	0.2	1	21	694	714	694	714	0.92
8	14	0.0065	0.4	11.1	2.1	2	23	781	801	780	801	0.96
9	14	4.2e-05	0.0026	18.0	1.0	1	23	807	830	807	830	0.97
10	14	0.00029	0.018	15.3	0.4	1	23	856	878	856	878	0.98
11	14	1.1	65	4.2	0.4	1	23	885	909	885	909	0.95
12	14	0.22	14	6.3	5.6	1	23	914	938	914	938	0.97
13	14	0.002	0.12	12.7	1.8	1	23	951	973	951	973	0.98
14	14	0.0013	0.079	13.3	3.4	1	20	979	998	979	1000	0.95

Sequence Information

Coding Sequence: ATGAACACCGAGTCGACAGATCTGGAGGACACGCATCTGTGCATCAAGTGCAATGCGACAATTGTGGGTCTGAGCAAGTATGTTGAGCACCGTAAACGAAATTGCCTCAGCACTGGCAGCGATGAGCACCTGTCGAAGCAGGTGGTGACTCCGGCAACGACGTCGGCTGCCAGCGAACAAGTATCGCACTCAGACATGCGTCGCAGCAACTTGGACCACAGCTATGATGGCTTCCACTTTGCAGAGCCGGAGGCACCCAGCAGTTATCTGCGCAAAACGGCCTCCAGTCATGGCGGAAAGACGTCCAAGTCCCTTACGGATTCCTATGATCCGACCTACGAGCTGGGTGCCGATCTGTTCTTCTcatcgctgcagctgcaaagtGTCTCAACTGGCGGCAAGACAGGTGCACGGCCGGAGCGTGGCGCTAAGGAGGAGCAGAGTTGGCATACGTCCAGCAACTGCTCCGATCCGCTACTGAAAGCGGTCCGGGAACACGAGGAAACCCACTTTAAATCACTCAAATTTGTGCACTCGCCCGAGGCAAGCGAGGAggaagacgacgacgaggacttcgagggcgatgatgatgagcatgAGCATGAACATGATCACGATCACGATCCCGATCCCGATCCCGATCCTGAGCCTGATGAGGATTACGATGGGCGTCGCCATTCGCCGCCGACGGTGCCTGCCACGCACACTGGCGGCAAATGGAAGCCAGAGCATCGTCCGCAACTGCAGCACACTCACCTGGAACGCATCTCGCCCAGCTGGGATGAGCCGCCGGAGGAACAACACGACCATCCGCCGGCGGAGCACACGCACGGCAAATGGGTGCCGGGCAGCAAGCAGCTGGAGTATCGCGAGAACATCGATCTGACCAAGTTGCAACAGCCAGGCGCCAGCTACTGGTGCAACATCTGCTGTCGCCGCCTCAAGACGCGCCTCAACTATGAGCAGCATCTGCGCAGCGCCTACCATCAGCGACGCGCCGACGCCGAGCGTCAACTGGAGCAGGCCAATCTCGCAAGCGCCAATCTAACGCTCACCACCAAGGACTTCCCACAGATGCCGCCAACGGAGCAGCTGCcgcgtcgtcgccgtcgtcgtgcCCACTTTCTGCGCTGCGATCTGTGCCGGCACAGCATGGCCCGTCATCTGATGGGCAAGCATCTCATCTCGCACTACCACTATCGccgcctgcagcagcagcaaccgaaCCAGCTGCGCCGACAGAGTGCCCTGCATGACATCCTCGAGCACATGGGCAGCATTGTGAGACAGGCGCCGTTCCAGTGTCTGCCCTGTCGCTTCTATGCCAACACTGAGCAATCCTTTCAGCTGCATTGGCGCTCCTCGACGCACGTGACGCTGACGGAGCGACTTGGTGGCAGCTTCTGGTGCAGCTACTGCCAGTTCGAGTGTGCCAGCAATGAGGAGATGTGGCAACATGTGCTCGGCTCCTCGCACAAGGAGGTGCTCTTTGCGATCAATCGTTCGGTGCCCGTTTGCATTGGCCAGCGTCGTCCGCTGAGCTGTTCCCGCTGCAGCGCCACTTTCCTGTACAATGCGCAGCTGCGTCGTCACTTCGCCTCGGAGCATGTGGGACTGGTGGCAGCGGGCAGCGCTGCCGATGACTATCAGTGCCGCTTTCGCTGTGGGATTTGTGGCGTTGCACAGAGATCTCGAGTGGCGCTGCAGCGGCACGAGAAGCACCAGCATCGATTGGCCAAATACTATTGTGCCCTTTGTCGGCTGGAGTTCGAGACGCCGCTGGAGGCGCGACGCCATCGCAGCCTGATGCAGCACAAGCGGCGAGCTTGCCGAGAATTGAGCCGCAaatccaacagcagcagcagcactaatCAGCCGGATCGCGAGATTCAACACATGCTGCACGAGGtgctggaggagcagcagcctgcagcagcagcagcagctgcaggagaGCAGACAGCAGCCCTGAGTTCCAAGCGGCGACGCCTGGCCAGCCAGTGTGTCAGCTGTCCGCTCAGCTTTGAGACGCCTCAGGCACTCGTCCAGCATCGGCGCGAGTTGCATCCAGTGGACAATCATGCCTGTCTCAGCTGTGGCAGTAGCTTTCAATCCGCCCAGGCTCTGGGAAGACACACACGCTGCTGCCAGCCCACAGCGTCCACCTCGACAGCTGTTGCTcccgctgctcctgctccagctcctgctccagctgcaaCATCTGAATCAAAGTCATGGAACTGTGCGCAGTGCAGTTTCACTGCTCAATATGAATCGGATTTGCTCTATCATCGCTTCTTTCACACCCACGGCTCGGCAATTGGCAAGAATGAGCTGCTCCAGTGTCCGCTGTGCCCCAAACAGTTTCGCAAGCACTCACTGCGTCCCCATCTGCGCAATCATACGGACGAAAGGATCTTCGAGTGCGTCGAGTGCTCGGCCAAGTTTGCCCGCAGACACAACCTGAAGAATCACATCGCGACAATGCATGGCCCAAAGGAGAAACCATCACCGGCTGCTGATAAGTCAACAGTCGAGCAATCGAAAGTGGTTGCAAAGCAGAAATATCAATGTGGCACCTGTGGCAAAATACTGGCCAAAAAATACTCGCTGAAACTACACGAAATGAGCCACGCTGAGGTGGAGCGTCAGCATCGTTGCCACATTGAGGATTGCCAATATGCCGGTCTCACGCCGGAGGCACTCAAAGTCCATCTAATCTCCCATGCGAATGGAAGTCACAAATGTGAACACGACAACTGCCAATATGTGGGCAAAAGTGCGCTGCACTTGAAAAGGCACCTCAAGTCGCATGTGCCAGAAAAGGAGCTGATCGAGGATGGCAAATGGTTTCCGTGCGATCAGTGCGAGTTCAGGGCCCGCATCAGGGGACATCTGAGGCGGCACATGCGTAGCCACACTGGCGAGAAACCCCATCAGTGTCCCCACTGTGACTTCCAGTGCAGCAGCATGGATAATCTGCGCAAGCACATCGTCAAAACGGGCAAGCATCCTGGCAAATTCATCTACGAGTGTTCGTCCTGCGACACCTTCAAGAGCAACAGTTTCAAGGATCACCGACTACATTTGGCcacgcataaaaataaattgccgTAA
Protein Sequence: MNTESTDLEDTHLCIKCNATIVGLSKYVEHRKRNCLSTGSDEHLSKQVVTPATTSAASEQVSHSDMRRSNLDHSYDGFHFAEPEAPSSYLRKTASSHGGKTSKSLTDSYDPTYELGADLFFSSLQLQSVSTGGKTGARPERGAKEEQSWHTSSNCSDPLLKAVREHEETHFKSLKFVHSPEASEEEDDDEDFEGDDDEHEHEHDHDHDPDPDPDPEPDEDYDGRRHSPPTVPATHTGGKWKPEHRPQLQHTHLERISPSWDEPPEEQHDHPPAEHTHGKWVPGSKQLEYRENIDLTKLQQPGASYWCNICCRRLKTRLNYEQHLRSAYHQRRADAERQLEQANLASANLTLTTKDFPQMPPTEQLPRRRRRRAHFLRCDLCRHSMARHLMGKHLISHYHYRRLQQQQPNQLRRQSALHDILEHMGSIVRQAPFQCLPCRFYANTEQSFQLHWRSSTHVTLTERLGGSFWCSYCQFECASNEEMWQHVLGSSHKEVLFAINRSVPVCIGQRRPLSCSRCSATFLYNAQLRRHFASEHVGLVAAGSAADDYQCRFRCGICGVAQRSRVALQRHEKHQHRLAKYYCALCRLEFETPLEARRHRSLMQHKRRACRELSRKSNSSSSTNQPDREIQHMLHEVLEEQQPAAAAAAAGEQTAALSSKRRRLASQCVSCPLSFETPQALVQHRRELHPVDNHACLSCGSSFQSAQALGRHTRCCQPTASTSTAVAPAAPAPAPAPAATSESKSWNCAQCSFTAQYESDLLYHRFFHTHGSAIGKNELLQCPLCPKQFRKHSLRPHLRNHTDERIFECVECSAKFARRHNLKNHIATMHGPKEKPSPAADKSTVEQSKVVAKQKYQCGTCGKILAKKYSLKLHEMSHAEVERQHRCHIEDCQYAGLTPEALKVHLISHANGSHKCEHDNCQYVGKSALHLKRHLKSHVPEKELIEDGKWFPCDQCEFRARIRGHLRRHMRSHTGEKPHQCPHCDFQCSSMDNLRKHIVKTGKHPGKFIYECSSCDTFKSNSFKDHRLHLATHKNKLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00528388;
90% Identity: iTF_00482583;
80% Identity: -