Basic Information

Insect: Drosophila planitibia
Gene Symbol: -
Assembly: GCA_035043785.1
Location: JAWNMS010000048.1:679720-682524[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00041 0.026 14.9 0.8 1 23 173 195 173 195 0.97

2 5 0.047 2.9 8.4 2.3 3 23 203 224 201 224 0.96

3 5 0.00077 0.048 14.0 1.2 1 23 511 534 511 534 0.94

4 5 7e-06 0.00043 20.4 0.5 1 23 570 592 570 592 0.97

5 5 0.0094 0.58 10.6 6.6 1 23 598 621 598 621 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00041	0.026	14.9	0.8	1	23	173	195	173	195	0.97
2	5	0.047	2.9	8.4	2.3	3	23	203	224	201	224	0.96
3	5	0.00077	0.048	14.0	1.2	1	23	511	534	511	534	0.94
4	5	7e-06	0.00043	20.4	0.5	1	23	570	592	570	592	0.97
5	5	0.0094	0.58	10.6	6.6	1	23	598	621	598	621	0.97

Sequence Information

Coding Sequence: ATGATTTGTCGCTTGTGCTTAAACGCATTGGACGAGCAGAATGCGGTGTTACTGTTCGCTGGCGCCGACAAAGAGGCcaacgaaaacaacacaaTACCGGAAAACTATTTGGTCCAATTGATATCGACGCATTTATATCTCTGTCTCTCTCGCGACGATGCCATTTCCACATCCATTTGCACCGATTGCTGTGTGCAATTGGAGAGTTTTCATAATTTCTGGAAGCTGGTGGAGCACAAACAGACAACGCTCTGCAGTCAGTTCCTGGAGATTGATTGCGATGTCAACTGGTCGGAGGAGGGCGATGtggaccaacaacaacaactgcagcaacaacaacaacaacagcagcagcatcatcagttAGCAGCCATCATTGACTTTAAGCAAGAGCCGGAGCCCGAGTTGGATGCTGATGAAACGCCTACTGTCTACGATGCAATAGTTAAAGAGGAAACCGAATTTCATGAATCTTACCTTAAGGTCGATCACAAGGCAGCTGCGGCGGCGAACAAGTTCCCCTGCATGTTTTGCGAAAAGTCTTTCAAAATGCGGCGCTATCTCGAGGAGCATGTGGCCACACACACTGGCGATCGCCCCATTGCTTGCGCCTATTGCAATACGGCGTTTCGTTGTCGCTCCAACATGTACACCCATGTGAAGACCAAGCACAACACCCAGTGGCAAAAGGCGCGCGCCGATCGCGAATCCGCCAAgatcaacagcaataacaacgtGCAAATCCAAAGAGGCGTCAATGGTGACAGCGATAAGTTTGCCTTGGATGCCATAACGTTGACGACCAGCGAGCCGCGaacaaacgaacaacaacagcaacaacaacaaccggaTATACTAAATAAAGTAGTTGCAGCTCAGCCGCCTCTGCCAGCGGCGACGCCTCCAAAAATCGCAGCACCTGCACCGCTGCCATCACCACCACCGCCTAGCATTGTCAAATGTGAGCCAATGGAGGCCATCAATTTAACGGTGGCCAAAGTGTGTCCGCCAACGAACCCAGCTAAGCGAGTGACACGCTCCAGCCGCCGTAAAACGCATTCGCCCAAAAAGGTGCAGCATACGGAGCGCAGTACCAGCGCCAGCGAGGATAGCAGCAACGACGTAGAACTCGCTGATCTGCACGAGAAGCGCTTGAAGACCGAGCTGCGGACGTGCAAGGAGAATGAACTCATTCTTGCCAACTATAATGCTGTCGCCGCTGTCgtcgctgccgccgctgcaaATCACCATCATaataatcaacaacagcagcagcgactctGCGCCACCAtcatgcagcagcatcaggagCAGCTGCTCACCGCCATGGCGGCGGTCAGCACAAgcgccagcaccagcaccggcaccagcaccagctcaCTAGCaaccgccgcagcagcagcagctgcagccgttGCGCTAAGCAGCCAAAGCAGcacaccaacaataaccccagcgcctgctgctgttgcctctgcctctgcctgcgTTTCCGTTCCGGCACCAGCATTGCCCAACGCAGAGGAGCCGTACGCGTGTAGCATCTGtgggcagcagctgcgcaaTCAGCGGGCGCTCAACAATCACCtgcacaacaagcacaacacaaTGCCTGGATCCAGTCCCAGTCACTCCCTGGCGTTGTCCATCTGCCCCAATTGCGGCGAGCTGCCGGGCCAGAATCATCGCTGCCACAGCAAAGCCAAATACGCCTGCGATATCTGCGGCAAGTCATTCAAAATGAAGCGCTATCTGGAGGAAcactttgccacacacacggGCGTCAAGCTGCACACGTGCGCCTTCTGCCCCACAGAGTTTCGCTCCAAGTCGAATATGTATCATCATACGAAGCGCAAGCACAAACTTGAATGGGAACGCTCCCGTGCCAGCCGCAATGCGGCCAAATCAGCTGCTCAcatggagcaacagcagccgccgatgcagtcacagtcacagccgGAAGACTCAGGCACAAATTCCTAG
Protein Sequence: MICRLCLNALDEQNAVLLFAGADKEANENNTIPENYLVQLISTHLYLCLSRDDAISTSICTDCCVQLESFHNFWKLVEHKQTTLCSQFLEIDCDVNWSEEGDVDQQQQLQQQQQQQQQHHQLAAIIDFKQEPEPELDADETPTVYDAIVKEETEFHESYLKVDHKAAAAANKFPCMFCEKSFKMRRYLEEHVATHTGDRPIACAYCNTAFRCRSNMYTHVKTKHNTQWQKARADRESAKINSNNNVQIQRGVNGDSDKFALDAITLTTSEPRTNEQQQQQQQPDILNKVVAAQPPLPAATPPKIAAPAPLPSPPPPSIVKCEPMEAINLTVAKVCPPTNPAKRVTRSSRRKTHSPKKVQHTERSTSASEDSSNDVELADLHEKRLKTELRTCKENELILANYNAVAAVVAAAAANHHHNNQQQQQRLCATIMQQHQEQLLTAMAAVSTSASTSTGTSTSSLATAAAAAAAAVALSSQSSTPTITPAPAAVASASACVSVPAPALPNAEEPYACSICGQQLRNQRALNNHLHNKHNTMPGSSPSHSLALSICPNCGELPGQNHRCHSKAKYACDICGKSFKMKRYLEEHFATHTGVKLHTCAFCPTEFRSKSNMYHHTKRKHKLEWERSRASRNAAKSAAHMEQQQPPMQSQSQPEDSGTNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499189;
90% Identity: iTF_00549136;
80% Identity: -