Basic Information

Insect: Drosophila planitibia
Gene Symbol: -
Assembly: GCA_035043785.1
Location: JAWNMS010000043.1:1431569-1436625[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.8e-05 0.0049 17.1 1.6 1 23 337 359 337 359 0.93

2 9 1.9e-08 1.2e-06 28.5 2.6 1 23 365 387 365 387 0.98

3 9 8e-06 0.0005 20.3 0.8 1 23 393 415 393 415 0.98

4 9 5.7e-06 0.00036 20.7 1.0 1 23 421 443 421 443 0.97

5 9 2.8e-05 0.0018 18.5 1.4 2 23 535 556 534 556 0.96

6 9 3e-09 1.8e-07 31.1 1.6 1 23 562 584 562 584 0.98

7 9 0.0037 0.23 11.9 0.9 3 23 592 612 590 612 0.97

8 9 6.5e-05 0.004 17.4 1.5 1 23 618 640 618 640 0.99

9 9 0.016 1 9.9 1.1 1 23 647 671 647 671 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.8e-05	0.0049	17.1	1.6	1	23	337	359	337	359	0.93
2	9	1.9e-08	1.2e-06	28.5	2.6	1	23	365	387	365	387	0.98
3	9	8e-06	0.0005	20.3	0.8	1	23	393	415	393	415	0.98
4	9	5.7e-06	0.00036	20.7	1.0	1	23	421	443	421	443	0.97
5	9	2.8e-05	0.0018	18.5	1.4	2	23	535	556	534	556	0.96
6	9	3e-09	1.8e-07	31.1	1.6	1	23	562	584	562	584	0.98
7	9	0.0037	0.23	11.9	0.9	3	23	592	612	590	612	0.97
8	9	6.5e-05	0.004	17.4	1.5	1	23	618	640	618	640	0.99
9	9	0.016	1	9.9	1.1	1	23	647	671	647	671	0.95

Sequence Information

Coding Sequence: atggccaTAAATTTCTCGGCCTCCTTTGCGGCCTGCATAGCGGCAGGCCTGAAGGTTCCCCGCCAGATAATGTACTGCATCACCCAGGACACGGGCCAGCCGTACGTCCTCTACAAGGACTCGCAGGACGCGGAACGCAATGCCGGCGCCATTGGCGCCAGTGCCGCACAATGGGGCAGCGACATGTACCCAAACATCCAGCAACAGGCCCAGCAACATCTCagcgcccagcagcagcagcagcagcaacagcagcagcagcagcaacaacaacagaatgccacagctgccgcacaagcggctgcagctgccgcagctgccGGCCAGCCGCAGAGTCCGCCCGGTGGCCAGGAGCCACGTGACAATGGCAGCGGCGACGGACGCCAGCAGCAGGTGTCGCCATCCTCGAGTCCGTATCCATCggtggtgcagcagcagcagcagcaacgggcCAATGGCAATGCCGATGAGGATGCCATGAATCAGCTTGCCAATCAACAGAACTCCGCGCCAAATCCAAACCAAAGCAGCAACGAGCCGCAGCATGCGTCGGCAAATGGCGGCGAGGCTGGCAATCCGCACGTGCAGCAGAATGGCGGCGGTGGTCAGCCGCAGGGCGATCCCCGGAATGGCTTTCAGACGCCCGACTATTATGCGCCACGGCATGGGGCGGGGCCGCAGGGCGGCATGCTGGCGCCACCAGGCTTTCCGCCGCTGCACTATCTCAAACAGGATGTGCTGCCGATGGAGCAGAATGGCGGCGAATCGTATGCGCTGCCCGAACTGCTGCccggacagcagcagcagcaacagcagcagcagcagcaacagaatgGGACGCAATCGAACCCAAATGCTGGCCAAGCgaatggcaatgccaatgaGGGCAGTGCGGCGCCCAATGGCCCGGCAACGGGCGCTGCTGGCAATGTGGCAACGGGAACAACGGGCGGTCGGACGGGACCCGGACGCCCGCAGAAGAATAAGCCGCACAGCGATCTGCGGCTATTCAAGTGCCTCACGTGCGGCAAGGACTTCAAGCAGAAGAGCACACTGCTGCAGCACGATCGGATACACACGGACGCCCGTCCATTTCCGTGCTCCGAGTGCGGCAAGCGATTTCGCCAGCAATCGCATCTGACCCAACATCTGCGCATCCATGCCAACGAAAAGCCATTCACCTGTCCGTACTGCTCGCGCAGCTTCCGGCAGCGCGCGATACTCAATCAGCACATACGCATCCATTCGGGTGAGAAGCCCTTCGCCTGCCCCGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTCAATCAGCATGTGCGCACCCACCAAGATGTCTCGCCGCATCTCATCTTTAAGAACGGGCCCCATCCGACGTTGTGGCCCTCGGACGTGCCCTTCCCGGGCGATGAGACGGATAGCAAGGGTGACATTGCCGCCGCCGGCGGTGGCTACCATGACGATGATTCCCAAGGCACACCCGACGGCAGCGGTGGCATGCACTATCCCTCCTACTTCAAGGATGTCAAGGCAGGCCAAAAAATATTGCCGGAGGTGTTGCAGCACATCGGTGTGCGGCCGGCGAATATGCCGCTCTACGTGCGCTGCCCCATCTGCGACAAGGAGTTCAAGCAGAAGACAACGCTGCTGCAGCACGGCTGCATTCACATCGAGTCCAGGCCGTATCCCTGCCCCGAGTGCGGCAAACGCTTCCGCCAGCAATCCCATCTCACGCAACATCTGCGCATCCATACGAACGAGAAGCCCTTCGGCTGCATGTACTGTCCCCGTTTCTTCCGCCAGCGAACCATTCTGAATCAGCACTTGCGCATTCACACCGGCGAGAAGCCGTACAAGTGCACCCAGTGTGGCAAGGACTTCAGACAGAAGGCGATTCTGGATCAGCATACGCGCACCCACCAGGTAGGAGATCGTCCGTTTTGCTGCCCCATGCCCAATTGCCGGCGACGCTTTGCCACCGAGAACGAGGTGACGAAGCACATTGACAACCACATGAATCCCAACAGCACCAAAGtgcgacgccagcagcaacagcagcagcaggtgcaacagcagcaggtgcagcagcagcaacagcagcaacaggtgcagcagcagcaacagcaacagcagcagcaacagcagcaaaataacGTTGCTGCCTCCGCTGCCGTTGTCGCCAATCATCTGATGAACGATGTGAAGAGTTTGGCCGCCCAGCAATTcctgaacaacaacaatcccgCCGCGGTGGACAACAAGGCAAACATATTGCCGGCGCGCAGCATGGCTGCCaatgcagcagcggcggcggcagttGCCCAGCAATCGGTTGTGAAGAACGAGCTCTATTTTCCGCAATGCTACGGCCCCCCCTTCCAGCATCCGTTccatgcccagcagcagcagcagcaacagcagccgagtGCGGCGCATGCGAATGGACCCACGCCGCCGGTGACTGTAACTGTGGCGAATGCGGTGGCGCCTGGCGTTGTGGTGCAACAGAATTCGGCCACCTCTGTGGTGGCTCAGTGA
Protein Sequence: MAINFSASFAACIAAGLKVPRQIMYCITQDTGQPYVLYKDSQDAERNAGAIGASAAQWGSDMYPNIQQQAQQHLSAQQQQQQQQQQQQQQQQNATAAAQAAAAAAAAGQPQSPPGGQEPRDNGSGDGRQQQVSPSSSPYPSVVQQQQQQRANGNADEDAMNQLANQQNSAPNPNQSSNEPQHASANGGEAGNPHVQQNGGGGQPQGDPRNGFQTPDYYAPRHGAGPQGGMLAPPGFPPLHYLKQDVLPMEQNGGESYALPELLPGQQQQQQQQQQQQNGTQSNPNAGQANGNANEGSAAPNGPATGAAGNVATGTTGGRTGPGRPQKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGDETDSKGDIAAAGGGYHDDDSQGTPDGSGGMHYPSYFKDVKAGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQVGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNSTKVRRQQQQQQQVQQQQVQQQQQQQQVQQQQQQQQQQQQQNNVAASAAVVANHLMNDVKSLAAQQFLNNNNPAAVDNKANILPARSMAANAAAAAAVAQQSVVKNELYFPQCYGPPFQHPFHAQQQQQQQQPSAAHANGPTPPVTVTVANAVAPGVVVQQNSATSVVAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548975;
90% Identity: iTF_00482402;
80% Identity: -