Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035043785.1
Location
JAWNMS010000052.1:42365-54956[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.1 8.4e+02 -1.1 2.5 92 133 26 66 17 89 0.64
2 3 6e-53 4.8e-49 166.5 0.5 18 189 411 579 393 587 0.89
3 3 3.6e-13 2.9e-09 36.4 0.8 188 221 629 662 619 664 0.89

Sequence Information

Coding Sequence
ATGGCGCTTACGTTTTTATCGCAAACTTCCGGCCTTTTGGATTTAAAAAGCATATTTGATCCACAATATTCattacaacaacatcaacaagaaaatcaacatcagcaacatcaacaacaacagcagcagcaacagcaactttgtTTGccatcacaacaacaacatcaacaacaacatcatcaaatATCACACATATCAACGAAATTTGATTTGAGCATTTTCAACGATTTCGACCAAATggaattcaataataatttgagtCGAAACCATAATCAGTACcagaataacaataacaataacgatAATATCAGTAgcatcaacaataataacaaccaaaataacaacagcggTGAACATTTAAATCAGGTCCAAAATCGTCATTGTATGAGCGgctatcatcatcagcatatTGGGTCAGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGACCTCTGAGGAATCTTGGACAGACGCACAGTCCAAGGATTCACCAGGACCGCATATTATCGACGTACGGACAATTTACTCAGAGAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGCCAAAGTGAAAATTCGCCGACAACACAATCGGGCGACATACCCAATAAGCTAGCACATCTCGAGAAAGATAAACACAAACGTGAAAAGCATTCAGGTCGCAGCAGCTGGAGCGACGATATTGGCTTCGATCTGAACGCCGATTTTAATAGCAACTCATATTTGAACAATGAAAATTTCTTGGCCTTCTCGCCGAGCTTAACGGCATTGAAACAGGAGCCGCAAACGGAGCAGCTGAAACCGACTCCAAAGCTACCCTTGGACAGCAGTTCTGCGGGAGCTGTGCACAATATTGGCAAGATCGACAAGTCGCCATTGGGCGATGCCAATCATTCACCACAGCGCCCTGTCCAATCCCAGGAAGTGATTGGCGCTGGAACAGGAACCGTAACAGCTGCtggcaacagtggcagcgAAAGCGGTGGCAAGCATGAGTTGAACTCCACTATTATATGCGGCTGTGGCTCACCACAAAGCTCGCCCGCCTCAACGGAATTTGAACTGAAGGATAGTGCCACCAATAgaaatgcagctgcaactgacaAAACCATTGCTGCATCTGGCAACGAGGCTTATGCCCAGGCTCCACGCtctgagctgcagcagcaggtgagCGTTGTCGAAGCGGCCAAAATTGAGCCAAGCTCATCCAGTGGTGCATCACATGCCGAGGATCACAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCGACAAAGAACAATGAGGAGACTTTGACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattgGTGATTTATCATTCTATCGCGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCACGAGCGTCGATTGCAGTTCATGGAACGCGAACAGATGCAACAATGGCAAGCATCGCGTCCTGGTGATCGCATCATTGAGGTGGATGTGCCATTGTCGTATGGTTTGTGCCACGTATCGCAGCCGTTGAGTTCGAGTGCACTGAACACGGTGGAGATCTTTTGGGATCCATTCAAGGAGGTCGGCGTCTACGTCAAGGTCAATTGCATTTCAACAGAGTTCACACCAAAGAAGCACGGTGGTGAAAAGGGTGTTCCGTTTCGTCTACAAATTGAAACCTATATAGAAAACGCACCagcaaatagcagcaacagtaacagcaacagcagcagcagcagcggcagcggtgcCAGTGTtaataacaacaccaacaacaacactagcAATACAACAactatcaacaacaacaacacattaGGTGGCACATCGGACAGTCGTGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCTTGTCAGATTAAGGTCTTCAAGCTAAAAGGCGCCGATCGCAAGCACAAGCAGGATCGggaaaaaatacagaaacgGCCAACATCTGAGCAGGATAAATTCCAGCCCAGCTACGAATGCACCATAATGAATGATATATCATTGGACCTGATAACGCCAACCACCACAACAGGCTGCTACAGTCCCGAGTATATGAAACTGTGGCCGAATTCGCCGGTGCATGTACCAAAATACGATGGAATGCTTCCATTTGCGAGCAGCGCATCACCAGCGGCCAGCAGCAGTCCCATTGCGATCAATTCAGTGACATCAACCAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCCACATGTGCCAGCAGACATGGAAGACTATAACCAGAACATAATGCCGGACTCAACACCGGCACAAGTGACACAATGGCTGACCAATCATCGTCTGACGGCCTACTTAGCCACATTTACTCATTTCTCGGGCGCGGACATTATGCGCATGTCCAAGGAGGATCTTATACAAATCTGTGGACTTGCCGATGGCATCCGTATGTTCAATATTTTACGCGCCAAAACGATTGCCCCACGTCTGACGCTCTATGCGAGCATGGATGGCTACAGCTACAATGCGATCTACTTGCTCTCCAACACGGCCAAGGAGTTGCAGCAGAAGCTGTACAAGTTGCCGGGCTTTTACGAGTTCATGGCGAAGGGCGGATCTGGTGGCGCCTTGGAGAATGGCGGTGttgcagctgcggctgctgctgctgcggcgctCTACAACAATTGGGGCATGCATTCTAAATACTCTGGCAGCGGCTCGAACATATTCAATGAGGTTAACAAGAGTTGCGTGTATATTTCGGGTCCTTCGGGCATTCTTGTCAGCGTCACCGACGAGGTGCTCAACAACGAGATCAAGGATGGCAGTCTCTATTCCCTGGATGTGCAGGGCGGCAAAGTTGTCTTGAAATTTATCAATAAGCAGGATAACAATTAA
Protein Sequence
MALTFLSQTSGLLDLKSIFDPQYSLQQHQQENQHQQHQQQQQQQQQLCLPSQQQHQQQHHQISHISTKFDLSIFNDFDQMEFNNNLSRNHNQYQNNNNNNDNISSINNNNNQNNNSGEHLNQVQNRHCMSGYHHQHIGSDYEQVINFVDSPPTSEESWTDAQSKDSPGPHIIDVRTIYSESGSRKRRMDWDSLDIGQSENSPTTQSGDIPNKLAHLEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNENFLAFSPSLTALKQEPQTEQLKPTPKLPLDSSSAGAVHNIGKIDKSPLGDANHSPQRPVQSQEVIGAGTGTVTAAGNSGSESGGKHELNSTIICGCGSPQSSPASTEFELKDSATNRNAAATDKTIAASGNEAYAQAPRSELQQQVSVVEAAKIEPSSSSGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSSALNTVEIFWDPFKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENAPANSSNSNSNSSSSSGSGASVNNNTNNNTSNTTTINNNNTLGGTSDSRAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPTSEQDKFQPSYECTIMNDISLDLITPTTTTGCYSPEYMKLWPNSPVHVPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPPHVPADMEDYNQNIMPDSTPAQVTQWLTNHRLTAYLATFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGYSYNAIYLLSNTAKELQQKLYKLPGFYEFMAKGGSGGALENGGVAAAAAAAAALYNNWGMHSKYSGSGSNIFNEVNKSCVYISGPSGILVSVTDEVLNNEIKDGSLYSLDVQGGKVVLKFINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00497147;
90% Identity
iTF_00576108;
80% Identity
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