Basic Information

Gene Symbol
Hivep1
Assembly
GCA_035043845.1
Location
JAWNMR010000493.1:10878335-10887050[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0016 0.1 13.0 0.4 2 23 290 311 290 311 0.98
2 8 0.00025 0.016 15.6 3.2 1 21 317 337 317 341 0.90
3 8 0.012 0.77 10.2 1.0 1 19 1037 1055 1037 1058 0.93
4 8 4.7e-05 0.0029 17.9 4.3 1 23 1821 1843 1821 1843 0.99
5 8 1.3e-05 0.00079 19.6 5.3 1 23 1849 1873 1849 1873 0.92
6 8 0.00058 0.036 14.4 3.5 2 23 2368 2389 2368 2389 0.97
7 8 0.00088 0.054 13.9 1.2 1 23 2395 2419 2395 2419 0.91
8 8 0.0028 0.17 12.3 2.7 1 23 2440 2464 2440 2464 0.92

Sequence Information

Coding Sequence
ATGACGCTACAGCAGGTGGCAAGCAGCGCAGCGAGCAATGtggcagcaacgacaacaactacaacagcaacaacaatagcagccacggccaacaccaccagcaacaataacaacaaccagaacaacaacaacaacaataacagcagcagcaaccacaacaacaacaacaacagcagcagcagggaagatccaatagcagcagcagtagcagcaacaatggtCGATGGCTGGATAACCTCAACCAATTTGCgttatttgcacaaaaagtTTAAGCGACTGGCGAGCACCACCGAACCAGAGTCGGTGGATGCAATGGCGGCGGCGCGCACCACATCGCTGTCATCGAACAGCTCGTTGTCGCCACcgctgccaccgctgccagTGCCGGCAGCTCCACTGCTCAATGGACATGTGACGGTGAAGGTTGCTCCCTTGCTGCCGGCAAGAAATTCAGAATTCAGTGCCAATTTTGCAAATGCcaacgacaacatcaacaacaacaacatcaataacaacaataacagtaacaacaacagtcatgatgagagcaacaacagcagcagcaacaagcatggcaatgttgctggtgttgctggtgcgCCTCGAACACGCACGCCCCTCAGCAACAgtaatggcaacagcaatattAACTATGCCAGCAATGCAACACTGTCGCCAGCAACATTCgcacagcatcagcagcaaacgcagccaacgccagcagcagcagcagcaacagcagccgcaacagcaacaacaacagcagcagcagtagcagcagcagcagcagcagcaacaacaacaataatacaaacagcaccagcaacagttgcagttgcaggaTTAGGCGAGAAAACTAGTCGCCCAAAGTGCCCCTATTGCAATCTGATCTGTGCAAAGCCATCGGTGCTGGAGAAGCACATTCGTGCCCATACCAATGAGCGACCGTATCCGTGCAACAACTGTGGCATCGCCTTCAAAACGAAGAGCAACCTGTACAAACACTGCCGTTCCCGTTCCCATATGGCGCGCATGCGTGGCCTCGATGTGCCAGCCAATGAGACGGACGGTCTGTCCGACCAGGATGGCGATGGAGAgctgagcaacagcagctccgaGCTGCTAAGCGTCGAAGTTTTGAGTCGCACAGATTCGCCTTATGATGAGGCAATGGCCTCGCCGacgccatcgccatcgacGCTGTCGGCGGCGAAGAGTACGTatctgcagcagccgcaactgcaacagcatatgctgcaacagttgccgctGGGCTCACCAGCAGCCGGAACACTGCCGCCCGCCCCGTCCGCTGACTCGCTGCACTCGGCGACCGCTCAGCATCGCCAGTCGCTCGACTACAAGCCATACAAGCCCAAGTTTCACAATGCATCCCTCTATGCGCCCGGCACCCTcaaggagcaacagcaaccgcagcagcagcagcagcagcagcaaccccagcaacagcagcaaccccagcaacagcagcaaccgcagcaaccgcagcagcagcagcaaccgcagcagcaacagcagcagcaacagcagcaggtactgcaacagcaacagcagcaggcgttgctgcaaccacaacagcagcaacacaaactgtcagcgcagcaacagcagcagcagcaaccatcGCTGGCTCATCCAACGCTGTCGCCCAGCACCCAGTTGAAGCTCAACAATCACATAAATTCGcatcagttgcagctgcagctgcagcaccagcaccaacagcagcagcagcagcagcaacagcagcagcatttgcacGCCCAGCAAtccttgctgctggctgccgcAGCAACCAATCCGGTTGCGTTGTCTGcattgccaccgccgccgccgggCGTTTATTATTTGAGACAGCCGCAGTATTATAatccaactgcagctgcaatgcATCAGCATGCGCTGGCCATTCAGCagatgcagttgcagcagcactttcagctgcaacaacagcagcagcagcagcaacagcaacagcagcatcaacatcaccaacagcagcaacagcagcagcagcagcatcaccaacagcagcagcagcagcaacactcgCCGTTGCTGAAggcgccacagcagcaacagcagcagCAGCTGTTGCGCTCCACTAGccaacaacaggcagcagtgattgcaacagcagcagcgctgccagcaCCAGCCACACCCAACCCGCCAACCAATCTGAGCAGCTTTGCCAGCTCAAGCGGCGGCATGCAAGTGAATGTGGAAAAGGTGCAGGAGCACATCTCCAAGCTGATCTCACAGAACGAGGCGATTGTGGAGAACAAGGAAATACTGCTGCAGAAGAAGTATCCCAAGCAGCTGAATCGTTCGCGCAGCttcaacaatgccaacaacaacaacaacaacaacaatagcagcaatagtaacagtaacagcaacatcaccagcagcagcagtataCCAGCAACAGCGcacgccaacagcaacagcagcaacaacagcaacagcaaccagcagctgGGCGAGACTAAAGTGAACCTGGCACAGGCCATAgtacaaaaacagcagcaacagcaacagcagcatatgcaacaacagttgcagcagcaacaataccaattatacttgcaacagcagcagcaacaacaactggagtCGCCTGTAAATGATCTGCCCaaacgcagcaacagcagctctgCAAGCAGTTCAGCCAGCAGCGGCTATGGCAGCTTGAAAGGCACGGCGACCTTAACACAACCCGGCGCATCCGCTGTAAATGTGAAACAATTGGAACAGTTGCCGCCGCCGCGATCACCGTTGCCGCTGCACCAGTTGCAGTATCGCCAGGATCCGTCAACGATAGTGCCcaagctggagcagcagcagttgcagcaacccTTGCCACTGAATTTGTCTGCCAAGCCGAAACCGTCACTAGCAATGCCAGCCAAAccaatgccaacagcaacagcagccgcagccgcatcagcaacaacaactgttgttgccaagagcacaacaacaacagcgccagcGGCAGCACCGAATGTATCCATAATCAAGAATCTGCTGTTGAATGCACGTGGCTTGGCAGTGCCAATTGGTGAGGGCGATGATGCCGTCTACTCCTGCCCCATTTGCGCCAGTAAGTTTCGCCACGCGGACGAGCTGAAGCACCACAACAGCACCTACTGCCAGGATGCGAACAGCAGTGCACCGATCAGTCCAGCCTCATCGCCGAGCACCAAATACTTTCGCTCCAATTCCATATCGCTTAGCCTGCCCGAGCTCCAATCGCACATGGCCAACTCGAAGAATCCGTTGTCGCTGGCCAAGCTCGCCAAGGTTGCCTGGTCGCAGCTAAAAACCAAGCCGAGCAGCCTGGTTCTCAGCCGCCTGAGTGCGGCACACTCTCCCGCACGCACCTCCACCATCACAGCAGCTaccaacagccacagcagcagcagcagcaaccacattaacagcagtagcagcagcagcatcaatcacaacagcagcagcaatcacataccagcaacagcagcaacagctgttgtaATCCCGCCCAGCATTGATGCCACCAGCGTTGTCTTGCGTTTTGTGGACGCACCGCTGCCATCGCCGGGTCCGCTGCTTGGCAAGACACCGCTGGTGGATTATGCGGCGCCACGCAAAGCGCCCGATGCCCAGGTGGTCATCACGAAAATGCACGAGGATCGTTTGGAGAACATCATCGTTGAGGCGCCATCGAAACGGCTCAAGCTGAGCAGTGGCGATACATCGTTCACGCTGCCATCTGTTGGCGATATGCTTTTTGCTGGCAATCCAGAGTTGCAGTTCAGTGGCAAGGATGAACGTTTGCGTCGCTTTACCTCATCCGGCGGCACCATGATACCCATTTCGGAGTGTCCCGAGCTGGACAAGAGTCCCAAAATGATACGCACTCCTCTGTTGTCAGGCGGCAGTTTCCAGGAGATGTCGCCGCGTCTCAGCGACATCAAGGAGCGCAAACTACtcgctgccaacaacaacaacaacaacaataataataatagcaacaacaaaaacaacaataataataataataataatggtttCCTGCTCAGCGTCTCCAACACGCCGCATCATTTCCAATTCCCACCCATCAATTCGATAACCGCCTTCAATCCGCTGACCCTGCCACCcatgagcaacagcagcggcaccagcagcagcaacagcagcagcaacattgtgGATAAAGCTATACCCTATGTGCCTGGCATACCCGGTCCGGGCAGCCTTTCGTTGCTGCCCCCGCCACTGCAGCGTGGACGCAGCCCCAATCGCAAACAGCCCAGTCCCAATACGAATGCCAATCTCAATATCAATCTCAATCCGCTGCTGGTAGCTGAGGGCCCACTCAAGGCACTGTCGCCCTTCGGTGGCGTACAGAATTTGCCCAGCGAATTCAGTCGCCAACCACCAACGCCAGCGCAACGCAATGCGCTCCAATGGAtgaacagcagcggcagcagcagcagcagcagcagcaataagcTGCCAGTGATTGTCGCTGACGGCACGTTGGGCAAGAAGCTACCATTCAACTTTCTACGCATGGCGGATAATGTGAAGAGCTCCGCTGAGTTGCGTCATTTTAATTTCGATAATGTGAACAAATCACAGGAGGCGCTGGCGCCGTTGCACGTCGACACGCCCGATGAggtagcggcagcagcagccgcaacagcagcagcaacagcagcagcaacagcagcagcaataaaaacaacaacaaccactgcaATTCTAGTAGCTGCAACAACCGCAACGAGCAGTGCCAAGTCGAAATTCCTGCGACCCACCAGTCTGCCCCTGAAGCCGGGCACCTTTACCCCAAAGCGACATCACGGAATCACACCGACTGCCAACACACTGCCCCTCATCTCACCGGAAACGCCGAGACCCTCCAAGTCGTGCGTGCAACTCTATCTGAATGGGCATGCGTACACCTATCTGGGACTCAAGTGCAGCACGAAGATGTTCTACTGTACGGTGAACTGTCCGCAGCCCTCGTATGTGGCGGGCATGCACAAGCTGTCCATGTACAGTGTGTGGCAGGTGTGCGAGGAGAATCAGCCGCATCCGCTTGGCTTCAAGCCCAAACAGGTGATGGCCCTGTACGATTCCAGGCAAAAGATGCTCGGCACTGGCTGCACCACAGCAATGGCGGGTGCCGGCAAACTGCAGTACTCCGTCTTTAGTTCACAGGAAACAGTTAGCACGTCCTCCACAACGGCCAATGGGCAGAGCAAGTTCTACCAGCACCAGTTGAAACAGCCGCCGGCAATTGGAGCGCTCAGCGAGGCGAATGTGGCAGCCAAGGCCAGCGAGGAGGCGGCTGCCAAGAAGCTGGAAACGTGTCAACTATTGGTCGGTGGCTACGAGTCGCATGAGGATTACACGTACATTCGTGGTCGGGGTCGTGGTCGCTACGTCTGCTGCGAGTGTGGCATACGTTGCAAGAAGCCGTCCATGCTCAAGAAGCATATACGCACCCACACCGACGTGCGTCCTTTTACCTGCAGTCACTGCAACTTCAGCTTCAAGACCAAGGGCAATCTCACCAAGCACATGCAGTCAAAGACGCACTTCAAGAAGTGCTTCGAGCTGGGCATCAATCCGGGCCCGATGCCCGCCGACGGCGAATTCCTCGATGTCGATGACTTTGATCAGCAATCGTCGACATCGGCGGGCGGACGCACCTCCTCCATGGCCGGTGAATCCGATTCGGATGACTACAGCGACAACGAGTCCGAGAGCAGTGACACCGATGAGTCCAAGTCGCGCATGAAGGAGCATGAGGCGGCACGGGgtctgctgtcgctgtcgatGACGCCGCCGATACCGCAGAGTGTTTCACCGTATCCGGCACTGGTCCAGGATACGCCGGCTGCTAGTCCAGCGAACAGCATTGGCTCGTCGGCTGGCAGCGCAGCTGGCAGCGGTTCGCAGGCGAAGCGGCAAGTTTGCTCGTTTACGTCGCCCAAGCCGCCGTTTGACTACCAGAAGCAGGAACAGTATTACTCCAATCCCGAGGAGTCCAAACCCAAGCGTGGTGTGCCCAACGATGAGAGCAGCGCACCCATGGATCTGACCAAGCCACGTCCAATGCCCAGCATTTCAGTGGCATCCTCGCCGCCCGCTGCGGACCAGATGCAGGCGCAGACACCCAAATCGCAGGCACAGCAGATGCGCGACGTAATCTTTGGCGCGGGCAACAACGAGTGCGTCTTAATGAAGACCCTAATCTCTGTCACCGACAAGGTGCGCATCTCTGCCAAAATTGAGGAGCAGGCAAAGCGCGAAAGCGAGGGCGAAGATGTCCTCCTGCAGACGTACATCAAGGAGCAGGCCCTGCAGCATGCCAAAATGAAGCAGAGCCAAATCAGTCGCAGCTACCTGGTCACTTCCACCACCAACTCCAACTCGTACTGCAtcaccagctgcagctccaACTCCACCACCATCACGAGCAGCGTTGGCATTAGCTGTGCTGTGACCACGCCCATTGTTAATAGCAAGCCAGTGTTGAACTTCGCGGAGCTGCCCAGCATTGAGGTGCACGAGGTGAAGACACCAGAGTCGACAACGCCATCGCCGGCACTGGTCAAATCCGCCGAGGAGAGTGAGGAAAGCGAAACGCAATCGGATCAGGAGAAGTCAAGCATAGCAGCAACGTCCGTTCCGGTGCCAGTTACCTTCTCTGTTTCAGTTGCTGTACCCGTTTCCAGCTCCAAGTCGAGTGCAGAGATTCAGCAGCCGCACAATGCCAATCTGCctgctgcagtgcagcagccAGATGCCACCGATTTTAGTGGCgtactcagcagcagcaacaataacaaaaatagcaacagcaacagtggcagcagtggaTCAACGGCACCCACGCGCATTGTGGTCGTCGGTGAGGATGGCTTCAAAACAACACCGACCAGCGGCGGCAACGAATTGCAGTCTGGCAACggagctgcaacagcagctgcaacagcagccgcaacagcaggtGCAACGTATACGAATCGTGTggtgccaccgccaccgccgccaatAGCGAGTGATGCGCGACCCACTTGCACCGTTTGCAACAAGACGTTCCAGCGAACGCATCAGCTATCGCTGCACATGAACATCCACTACATGGAACGGAAGTTCAAATGCGAGCCGTGCAGCATCTCGTTCCGCACCCAGGGTCACCTGCAGAAGCACGAGAGGAGCGAGGCGCACCGCAACAAAGTGATGATGACATCAACGTTTGGTGTGCCAACCACATCCAATCCGCGTCCCTTCGAGTGCACCGATTGCAAGATTGCGTTTCGCATCCACGGCCACCTGGCCAAGCATCTGCGCTCCAAGACCCATGTGCAGAAGTTGGAGTGCCTGCAGAAGTTGCCATTTGGCACCTATGCCGAGATCGAACGGGCTGGCATCAGTCTGACGGAGATCGATACCAGCGACTGTGAGAATTCGCTCATCTCGCTCAAGCTGCTGGCGCAGAAGCTGCTCGAGAAGGATCCGAACAAGCTGAGTGGCTACACAACGCCGTCGGGCATGCTGCAGCTATCGACGGATGCACCTGCTGCCGGCCAGGACAGCGCCTCCGAGGATGGCTTCAGTGCGGCGAACAGTGCCGCCGCCTCGGCCATTGCCTCGCTGGACAACGACAGTGCGGGCAACACACCGAAGCGTGCCAGCTCCATGTCCGAGGATGAGACGCTCACCAACGGACTCGGCctcagtcacagtcacagccaTGGCCACAGTCTGAAGCGACGTCTGCAGAacagcagcttcagcagcaATGGCGACGAGAGCGACAATCCAACGGATACcgctggcagtggcagtggcactggcagtggcagcagcgagAAACGTGCGAGAAGCAACACAAATGAAATCATCACACTGCCAACGCCGGTGGCTGTGTCAACGGCAACGGCCAGCAACTGa
Protein Sequence
MTLQQVASSAASNVAATTTTTTATTIAATANTTSNNNNNQNNNNNNNSSSNHNNNNNSSSREDPIAAAVAATMVDGWITSTNLRYLHKKFKRLASTTEPESVDAMAAARTTSLSSNSSLSPPLPPLPVPAAPLLNGHVTVKVAPLLPARNSEFSANFANANDNINNNNINNNNNSNNNSHDESNNSSSNKHGNVAGVAGAPRTRTPLSNSNGNSNINYASNATLSPATFAQHQQQTQPTPAAAAATAAATATTTAAAVAAAAAAATTTIIQTAPATVAVAGLGEKTSRPKCPYCNLICAKPSVLEKHIRAHTNERPYPCNNCGIAFKTKSNLYKHCRSRSHMARMRGLDVPANETDGLSDQDGDGELSNSSSELLSVEVLSRTDSPYDEAMASPTPSPSTLSAAKSTYLQQPQLQQHMLQQLPLGSPAAGTLPPAPSADSLHSATAQHRQSLDYKPYKPKFHNASLYAPGTLKEQQQPQQQQQQQQPQQQQQPQQQQQPQQPQQQQQPQQQQQQQQQQVLQQQQQQALLQPQQQQHKLSAQQQQQQQPSLAHPTLSPSTQLKLNNHINSHQLQLQLQHQHQQQQQQQQQQQHLHAQQSLLLAAAATNPVALSALPPPPPGVYYLRQPQYYNPTAAAMHQHALAIQQMQLQQHFQLQQQQQQQQQQQQHQHHQQQQQQQQQHHQQQQQQQHSPLLKAPQQQQQQQLLRSTSQQQAAVIATAAALPAPATPNPPTNLSSFASSSGGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNNNNNNNSSNSNSNSNITSSSSIPATAHANSNSSNNSNSNQQLGETKVNLAQAIVQKQQQQQQQHMQQQLQQQQYQLYLQQQQQQQLESPVNDLPKRSNSSSASSSASSGYGSLKGTATLTQPGASAVNVKQLEQLPPPRSPLPLHQLQYRQDPSTIVPKLEQQQLQQPLPLNLSAKPKPSLAMPAKPMPTATAAAAASATTTVVAKSTTTTAPAAAPNVSIIKNLLLNARGLAVPIGEGDDAVYSCPICASKFRHADELKHHNSTYCQDANSSAPISPASSPSTKYFRSNSISLSLPELQSHMANSKNPLSLAKLAKVAWSQLKTKPSSLVLSRLSAAHSPARTSTITAATNSHSSSSSNHINSSSSSSINHNSSSNHIPATAATAVVIPPSIDATSVVLRFVDAPLPSPGPLLGKTPLVDYAAPRKAPDAQVVITKMHEDRLENIIVEAPSKRLKLSSGDTSFTLPSVGDMLFAGNPELQFSGKDERLRRFTSSGGTMIPISECPELDKSPKMIRTPLLSGGSFQEMSPRLSDIKERKLLAANNNNNNNNNNSNNKNNNNNNNNNGFLLSVSNTPHHFQFPPINSITAFNPLTLPPMSNSSGTSSSNSSSNIVDKAIPYVPGIPGPGSLSLLPPPLQRGRSPNRKQPSPNTNANLNINLNPLLVAEGPLKALSPFGGVQNLPSEFSRQPPTPAQRNALQWMNSSGSSSSSSSNKLPVIVADGTLGKKLPFNFLRMADNVKSSAELRHFNFDNVNKSQEALAPLHVDTPDEVAAAAAATAAATAAATAAAIKTTTTTAILVAATTATSSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKPKQVMALYDSRQKMLGTGCTTAMAGAGKLQYSVFSSQETVSTSSTTANGQSKFYQHQLKQPPAIGALSEANVAAKASEEAAAKKLETCQLLVGGYESHEDYTYIRGRGRGRYVCCECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCFELGINPGPMPADGEFLDVDDFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRMKEHEAARGLLSLSMTPPIPQSVSPYPALVQDTPAASPANSIGSSAGSAAGSGSQAKRQVCSFTSPKPPFDYQKQEQYYSNPEESKPKRGVPNDESSAPMDLTKPRPMPSISVASSPPAADQMQAQTPKSQAQQMRDVIFGAGNNECVLMKTLISVTDKVRISAKIEEQAKRESEGEDVLLQTYIKEQALQHAKMKQSQISRSYLVTSTTNSNSYCITSCSSNSTTITSSVGISCAVTTPIVNSKPVLNFAELPSIEVHEVKTPESTTPSPALVKSAEESEESETQSDQEKSSIAATSVPVPVTFSVSVAVPVSSSKSSAEIQQPHNANLPAAVQQPDATDFSGVLSSSNNNKNSNSNSGSSGSTAPTRIVVVGEDGFKTTPTSGGNELQSGNGAATAAATAAATAGATYTNRVVPPPPPPIASDARPTCTVCNKTFQRTHQLSLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHRNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMLQLSTDAPAAGQDSASEDGFSAANSAAASAIASLDNDSAGNTPKRASSMSEDETLTNGLGLSHSHSHGHSLKRRLQNSSFSSNGDESDNPTDTAGSGSGTGSGSSEKRARSNTNEIITLPTPVAVSTATASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00513682;
90% Identity
iTF_00499804;
80% Identity
-