Basic Information

Insect: Drosophila picticornis
Gene Symbol: -
Assembly: GCA_035043845.1
Location: JAWNMR010000491.1:18687836-18689446[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 9.7e-05 0.006 16.9 1.8 1 23 231 253 231 253 0.97

2 11 1.3e-05 0.0008 19.6 3.1 1 23 259 281 259 281 0.99

3 11 3.8e-06 0.00024 21.3 0.2 1 23 287 309 287 309 0.98

4 11 2.3e-06 0.00014 22.0 2.1 1 23 315 337 315 337 0.98

5 11 1.2e-05 0.00077 19.7 0.6 1 20 343 362 343 365 0.95

6 11 2.4e-06 0.00015 21.9 6.1 1 23 371 393 371 393 0.98

7 11 1.4e-05 0.00086 19.5 2.3 1 23 399 421 399 421 0.98

8 11 4.5e-06 0.00028 21.1 3.3 1 23 427 449 427 449 0.98

9 11 9.4e-05 0.0058 16.9 0.4 1 23 455 477 455 477 0.98

10 11 1.4e-07 8.5e-06 25.8 0.2 1 23 483 505 483 505 0.97

11 11 3.6e-06 0.00022 21.4 2.7 1 23 511 533 511 533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	9.7e-05	0.006	16.9	1.8	1	23	231	253	231	253	0.97
2	11	1.3e-05	0.0008	19.6	3.1	1	23	259	281	259	281	0.99
3	11	3.8e-06	0.00024	21.3	0.2	1	23	287	309	287	309	0.98
4	11	2.3e-06	0.00014	22.0	2.1	1	23	315	337	315	337	0.98
5	11	1.2e-05	0.00077	19.7	0.6	1	20	343	362	343	365	0.95
6	11	2.4e-06	0.00015	21.9	6.1	1	23	371	393	371	393	0.98
7	11	1.4e-05	0.00086	19.5	2.3	1	23	399	421	399	421	0.98
8	11	4.5e-06	0.00028	21.1	3.3	1	23	427	449	427	449	0.98
9	11	9.4e-05	0.0058	16.9	0.4	1	23	455	477	455	477	0.98
10	11	1.4e-07	8.5e-06	25.8	0.2	1	23	483	505	483	505	0.97
11	11	3.6e-06	0.00022	21.4	2.7	1	23	511	533	511	533	0.98

Sequence Information

Coding Sequence: ATGGAGCAAATTTGCCGTGCATGCAAAATAAGCTCCTGCAGTCTAGTGAATATATTCACAGAGGGACAGCCCAGTCTGGCGGAGATGTTGAGCGAGTGTGTTGCCTGTGCAATCAATCGAAATGATGCGCTCCCCCAGCAGCTGTGCCTCTCCTGCGTCAGCGCTGTACACAATGCGTTTCGGTTGAAGCGCAACTCCGAACAGAaagaaccaaaaacaaatgtttgccgCATTTGCAGAAGCAGTTCAATTACGCTACTTGAGATCAATGccaagcggcagcagccactGGGAGAACCCAGTCTAGCGGAAATGATAAAAGAGTGCATTGGGTATCGCACAAATCCCATGGATCAGATATGTCTCTCCTGCATTTTGAGCGTTGAAAACGCCTTTCAATTCAAGTGCAGATGCCAGCAGAGCCAGCACTCTTTCTGTCCACAAAAGAGTAAAACTGAAATTCAAGAAAGTGAGGCAGTTGAACATGTGCTGCCCGATAACAGCTTAGAagtggagcaacaacaacatagcGTTAAAATCGAAGTCAGCGATAATGAAGAAGACTTTGAGTGCGAGCAGACTCGGATTATTTTGGAGGAGCAGCATTGTGAAGAAGAGCAACCGGAAGTGAATACCACGCCTGTCAATAATCATGTTCTGGCAGAGATCGAAGTGGATGCAAAGAAGAAACACATGTGTGAGATTTGTGACAAAAGGTTATCGAGCACTGCTCACTTAGTCGTGCACAGACGCATCCATTCCGGAGAACGTCCGTTCAAGTGTTGCGAGTGTCCAAAGGATTTTACAAGTCGCAAAGTACTCAAGGATCACATGCGCATCCACACCGGCGAACGGCCATTTCAGTGCGCCCAGTGCCCCAAGGCATTTGGCCGGAATGGTGCTCTGGTCAAGCACATGTTCACACATACGGGCAAACGTCCCTTCAAGTGCAGCGAGTGTCCGAAAGCCTTCTATCAGAGAGGACACTTGAAGATCCATAATCGCATTCATACTGGTGAGCAGCCATACAAGTGTCCCCATTGCCCACGGGCCTTTCCACGCAAGGAGTATCTAGTGACGCATCTGCCACTGCATACGGGAGAGAATCCACACCAGTGTACCCACTGTTCCAAGTCCTTTTCCCGCAGCAAAAACTTAGAAATACACTTGACTACACATACGGGTCAGCAGGCCCATCGGTGTCCCCATTGCATCAAGGCGTTCACCGCCAATTCCAATTTACAAATCCATATCCGGAGTCACACGGGTGAGCGCCCGCACAAGTGTCCCTACTGTGCGAAGGCATTCAGCCAGAGCATCTGCCTCAAGAATCACATACGCATCCACACTGGCGAACGACCCTTCCAGTGTACCCAATGCCTCAAGACTTTCGCCAGCAGTGGAGGCCTCTACAGTCATGGTCGTGTCCACTCCGGCGAACGTCCTTTCCAGTGTCCCCAGTGCCCAAAGCGATTTCCGCGCAACGAGAATCTACGCAACCACATTGGCATCCACTCCGATGATCGGCCGTACAAGTGCAGCCTATGCCCCAAGCACTTTACCCGCCGCGAAAGCCTGGCCCGGCACAAGCTGATTcatgcaaaaaattaa
Protein Sequence: MEQICRACKISSCSLVNIFTEGQPSLAEMLSECVACAINRNDALPQQLCLSCVSAVHNAFRLKRNSEQKEPKTNVCRICRSSSITLLEINAKRQQPLGEPSLAEMIKECIGYRTNPMDQICLSCILSVENAFQFKCRCQQSQHSFCPQKSKTEIQESEAVEHVLPDNSLEVEQQQHSVKIEVSDNEEDFECEQTRIILEEQHCEEEQPEVNTTPVNNHVLAEIEVDAKKKHMCEICDKRLSSTAHLVVHRRIHSGERPFKCCECPKDFTSRKVLKDHMRIHTGERPFQCAQCPKAFGRNGALVKHMFTHTGKRPFKCSECPKAFYQRGHLKIHNRIHTGEQPYKCPHCPRAFPRKEYLVTHLPLHTGENPHQCTHCSKSFSRSKNLEIHLTTHTGQQAHRCPHCIKAFTANSNLQIHIRSHTGERPHKCPYCAKAFSQSICLKNHIRIHTGERPFQCTQCLKTFASSGGLYSHGRVHSGERPFQCPQCPKRFPRNENLRNHIGIHSDDRPYKCSLCPKHFTRRESLARHKLIHAKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00558881;
90% Identity: iTF_00498283;
80% Identity: -