Basic Information

Gene Symbol
pnr_2
Assembly
GCA_951394115.2
Location
OX596008.2:30071076-30076314[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9 9.4e+03 -3.1 1.3 17 25 62 69 58 69 0.66
2 3 7.1 1.7e+04 -4.0 0.7 1 6 241 246 241 247 0.83
3 3 1.7e-16 4.2e-13 49.2 2.5 1 35 741 774 741 775 0.98

Sequence Information

Coding Sequence
ATGTATAATGTACCACATAAGTATCGTCAAGTTTGTCGATTGTGCCTCACTTTGGTTAATGAGTGCGATATCGGAGatctacaaatttataatagtGAGACAAGCGCAAATGAAACAGTTCATCAATTATATGTTAATCAGTGCAATATTAATGAGAACGCAACGAAatcgaatgcgaatgcgaattcGAAATGTGTATGCAATGCATTGGACCCAAATACATGTTGCTGCCAATGTGATGATGATAACTCGTTATCAGCAGTGCAATGCAATAATCCAAAATCGAATTCTCAACatcataaaaatacaaataaaaacaattatacaccaAGTGTGCCTTCTGCTATTGTTAACCCGCCATGCAcaattgacaacaacaatattatgTATGCACGCATGTTTTCCAATCAAGTAGCAACAAATCCAATTGGCcaggagcagcaacaacaatttatacacaacaacaacagcagcaacaccaacaccaacaagaagcagcagcaacaaccacatgATATCGATATTCATCATCATGATAATGCCAATAAATCGTCATCAGCAACAAAACATCATGTATTTCATGATATCGGCGAAAATACTTCAAGCAACGAAAATTACAATCAAGAGCATAAAGATGATTCATCACCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTACCGAATGATGGATTCCCTACAATTATCTGCCGTGAGTGCCGGACAAAGCTTGAATCGTTTTGGAAGTTTCGCAATATGGCGTTGAATTCACATTTGGCTTTAAGAGAATTTTTAACAATATCGGAATCTTCGAAGCTTgACTCCAACCATTTGGAATCGAAACTTGATGAAATTTTAAAGTCAACATCCGAGGCAATAGCGGCAAAGGCACTGACTGAACTGAGTAAATCTTCAAAAACAAGATATAGCCAACGGCAACCGAAACTTGATGGTATTTTAAATGCAGCAAAGGATCTGGAGCGACATATTGTTGAGAATAACAAACGAGACATTCAGACGCCTTTATTGTATTCAAACCTATTTGAAAGTCCATCCCAATCACAAACATGCAACAATAATGCTATTGAAAGAGAGCCGATAATGATGCAAGATTCAAATCTAATGACAGCgcgaacagcaacaacaacaacaaccacaattaAAACtgagaaatattttgaattagaTAACGGTACGGCGATGAATTCAAAAGATCCAGATGTGGAACAATATAAGAACTTGCAACAGCAATTAGAGACTGCCGCAGTGCTTATGGATATTAGTAAAAAGATTGTCATTTCACCACCATGCTCGAATCCCCAATCTCCTTGTCTTTCTGCAATTGTAGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATCAATCGATAATGAGATGCAAGATAGTGTTGAGATCGACTTGTCCgtgaaaaagaagaaaattgaATATTCCACTGAACGGAATGTTGTagcctcaacaacaacagcaacaacaacaacagcaactggaatagcaacaacatcaacaccaCGTAACACATTTGGCCAACAACCTCAAATACTTGATATCCATGCGAATCCTATAAGGATTGGCGATGGCGATCCTAAAAACTATAGTATTACCATCAATGATGTTGGCTCCTCTGGTTACCAATTGAACACTAAAAAACTGAATACCGAAAGTATTGCGACTACTTGTCTAACGGACTCTGAGGACAGCTCTGATTCGAATAAACTAGAAATGGATATTGCATCTGCTATGAACGATCGAAAGACTCCGGAGAGCGTTAATTCTGATCATGCAACAGATGCGGCGACGACACAACTCTGGCAAGCATTGGCACGATCCGCTGccAAAAATAAAGAGGAAAGTCGAGCATCGCAATTATTGCGAAACATGATGAATCAAACTTTTGTATTTCCTGTGCCGTCGACCATAGCATTGACAAAAGTACCTGAAGAACCATTACCACTATTAAAGGATATGTCTGAATCTCAATCGAGTGTTGTCAAAATATGTAGAAGAAAGCAAAGTTTTCCTACAAAAACCGATTGCATCGAGTCTCCAGATATTAAGGTGACCGATACTTTCGTTCGTTCCGAAAGTGTATCAAATACATTGACAGAAGGAATCAAAGATAAAAAGAGTTTAAAATGCAACAGCACAAGTGCTCTGTCTACATCACAGAAGGATATGTCTTGCTCGAATTGTGGTAccctaacaacaacaatttggcgACGTAGTGTCAGAGGTGAAATGGTTTGTAATGCTTGCGGATTGTACTTTAAGCTACATGGCGTTAATCGACCCCATTCTATGAGACGCGACACCATTCATACTCGGCGCAGGCGTCCAAAAGAATGCGagaaatcaaagaaaaGAAACCGACAAATACCCTGCAATTCGGCGGTAGAGTATGAAACGCATAACATCAGTAGTCCCGTTGAATGCAAGAAGCTGGATTTATCAATAAATCAGGAAGCACTCAGTATTTCAGATCTAGTATTTAACaaatACAAAACGGAATTATCTGAAACTGGAggagcagcggcagcaacactAAAAGATGTTATTTTAAAACGGAAAAAATCACAATCTTTGCCTGAGTTTAATGATACCTGCGAAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAACgccaaataa
Protein Sequence
MYNVPHKYRQVCRLCLTLVNECDIGDLQIYNSETSANETVHQLYVNQCNINENATKSNANANSKCVCNALDPNTCCCQCDDDNSLSAVQCNNPKSNSQHHKNTNKNNYTPSVPSAIVNPPCTIDNNNIMYARMFSNQVATNPIGQEQQQQFIHNNNSSNTNTNKKQQQQPHDIDIHHHDNANKSSSATKHHVFHDIGENTSSNENYNQEHKDDSSPHITIQIFNCLSIKPLPNDGFPTIICRECRTKLESFWKFRNMALNSHLALREFLTISESSKLDSNHLESKLDEILKSTSEAIAAKALTELSKSSKTRYSQRQPKLDGILNAAKDLERHIVENNKRDIQTPLLYSNLFESPSQSQTCNNNAIEREPIMMQDSNLMTARTATTTTTTIKTEKYFELDNGTAMNSKDPDVEQYKNLQQQLETAAVLMDISKKIVISPPCSNPQSPCLSAIVDTSIKSSVIKSKRPSIDNEMQDSVEIDLSVKKKKIEYSTERNVVASTTTATTTTATGIATTSTPRNTFGQQPQILDIHANPIRIGDGDPKNYSITINDVGSSGYQLNTKKLNTESIATTCLTDSEDSSDSNKLEMDIASAMNDRKTPESVNSDHATDAATTQLWQALARSAAKNKEESRASQLLRNMMNQTFVFPVPSTIALTKVPEEPLPLLKDMSESQSSVVKICRRKQSFPTKTDCIESPDIKVTDTFVRSESVSNTLTEGIKDKKSLKCNSTSALSTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQIPCNSAVEYETHNISSPVECKKLDLSINQEALSISDLVFNKYKTELSETGGAAAATLKDVILKRKKSQSLPEFNDTCEGEELSVPLNLVSSENNAKLTYNAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00529226;
90% Identity
iTF_00523337;
80% Identity
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