Basic Information

Gene Symbol
GATA6
Assembly
GCA_951394115.2
Location
OX596005.2:21879067-21882474[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.12 2.9e+02 1.7 1.0 1 23 495 514 493 516 0.71
2 2 3.8e-17 9e-14 51.3 6.7 1 34 547 579 547 581 0.97

Sequence Information

Coding Sequence
ATGGAAACGCAAGCGACgccgcagcaacagcaacaacagcagcagcagcagcagcaacaacaattgcaacagcaacagcaacaacagcaagtgtTGAGCAAACAGCAGTTGCAATTGCtggataaaatcaaaattgaaaCGAGCAACGGCAACGATCCACAGTCCAATCAAGTGCTGGAGGagcaacaggagcaacagcaacagcaacagcaacagcagcagcaatcagCAACAACTGTTGGTGTTCTAGTGCAGAGCAATAGTCAAGGCAGTGAATCCGatgagcaacagcaacaacaacaacagacacaGTACGTTGTAGTCCCACGCACCCAACAGCGACGCATTCTGACCACAGCTGGAACCCTCGAGCTGAACGAGGCACGAGAGGGAGAGCAtagcaccaacaacagcagcgccAGCTCCAACTCTGCACCGGAGACCCACATCGAGTATCAACGGAGCTCGCACCACTCGCCGCACTACATTCAAATGGCACCACGAAGTGCTGCTGAAGTGGCTGAACAGGTGGCAGCCAATGCTCCACCTGGCACACTCTATGCCTTTCCATCGGGTCAGATTATTTGCAGCAGCGATGATGTGACGGCCATCAAAATAGAGACGATTGACAAGAGCGATGTGCCAGGCGAGGCACAGGCACAGGCAcagcagttgcagcagcaacagcaacaccagcatcaacagcagcagcagcaacagcaacaacagcagcaatgccCCACGCCTAATGGTGGTCCTTATGCGGATGCCATTGTGGTTAGCAGTGAGGCTGCTCTGCAGCATCATCaccagcagcatcagcaacaacagcagcagcagcaacagcaacaggttCAACATCACCAGCaacaggcagcagcagcagcagccgccgccgcagcagctgcagcggcaAGTCAGAACCACAGCGTGCGATATGTGACGGAAGATGGACGCTTCACCACCGCCAGCGGGGAGGCAGAGGCGGCCGGGGGCAATCTATACTACGATGCACCGGTTGTGGATGCGGCCAGTGTGCATGCGAATGAATCGAAGACCTATGCGGATCTGGGCAATGCCTATGCCGCCTTTCCGCCCAACTCGACgttcagcagcaacagctatGCGGCAGCAACGTTGCAACAGGGCAACACCATTTACAGTGTGCCAGCAACGGCACAGTTTATCACGAAAACGGATCCCAATTTGAATCCATTGAGGCCAACAGCAGCGGGCACCTATCAGGCGATATCCTTCTTGGACGGCACCAATGCCAACGATGCGGCATTGTGGACTAACGCTGCCACGGAATATCAGAATGTATCATTTTCCAACTATCATTCGCAGGTCATCGATGATTATCCGGCCAGTAACATGACTGCCGCCCATTGGCCCCCAACCGCCAGCATTGGCAGCTATGATCCCAGCCTGGCAGCCACCAATGCAGCATCGCCTCCAACTCACGGCCTGCAGGAGGCCAAATGCGAGAACTGCCAGACGCCGTTCATGCGAAAGGGTGCCGACTATTTCTGTCACGTCTGCACCACCAACTATGGACGTGTCCTGCCGCCACGCATCCCACAGCGTCAGAAGCCAAAGGCGGCGGCAGCACCGAATAATCGGCGTAGTGGTGTCATCTGTGCCAACTGCCAAACAGCCTCAACGACCCTCTGGCGTCGCAACAACGAGGGTAATCCCGTTTGCAATGCCTGCGGATTGTACTACAAGTTGCACAACATGAACCGACCTCTCTCCATGAAAAAGGAGGGCATTCAGAAGCGCAAACGCAAACCCAAGAACAATGGAGGATCTATGCCGCATCGAGCATTACCAAGCATGTCACAGGGTGTTAACCTGATGGTGAACAGCGGTGCAGTATATCCCTCACAGGTGCCATTGGGCCTGCTGAACAGCCAACAGAATGCAAGTCCCGAGCTGCATGATATGTCGACAACTGGACCCGCCGGAGGGACGCGTGTGGTGGCGATTGCGTTGAATGCGACAGTGCCCACGTCGGATGGCACATTGAatatgtctcgtcatcatgtGACGAGCGAGAGTCACTCACCCTacagccagcaacaacagcaacaacaacaacaacagcagcagcaacaacaacaacagcagcaacagcagcagcaacaacagcaacaacaacaatcaccgGCACAAAGTCAATCACCGCATCTGCCAAACTCGAGCACATTGAATCGCCAGATAGCACAATCTGTTCCGCCAATTGAGAGTGGTCGTAGTTCCAATAGTGAACTGACTCCAAGCGTCATCACGCGAACGGGCTTACCAGAGCGCACTTCGAATAACTGA
Protein Sequence
METQATPQQQQQQQQQQQQQQLQQQQQQQQVLSKQQLQLLDKIKIETSNGNDPQSNQVLEEQQEQQQQQQQQQQQSATTVGVLVQSNSQGSESDEQQQQQQQTQYVVVPRTQQRRILTTAGTLELNEAREGEHSTNNSSASSNSAPETHIEYQRSSHHSPHYIQMAPRSAAEVAEQVAANAPPGTLYAFPSGQIICSSDDVTAIKIETIDKSDVPGEAQAQAQQLQQQQQHQHQQQQQQQQQQQQCPTPNGGPYADAIVVSSEAALQHHHQQHQQQQQQQQQQQVQHHQQQAAAAAAAAAAAAAASQNHSVRYVTEDGRFTTASGEAEAAGGNLYYDAPVVDAASVHANESKTYADLGNAYAAFPPNSTFSSNSYAAATLQQGNTIYSVPATAQFITKTDPNLNPLRPTAAGTYQAISFLDGTNANDAALWTNAATEYQNVSFSNYHSQVIDDYPASNMTAAHWPPTASIGSYDPSLAATNAASPPTHGLQEAKCENCQTPFMRKGADYFCHVCTTNYGRVLPPRIPQRQKPKAAAAPNNRRSGVICANCQTASTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGSMPHRALPSMSQGVNLMVNSGAVYPSQVPLGLLNSQQNASPELHDMSTTGPAGGTRVVAIALNATVPTSDGTLNMSRHHVTSESHSPYSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSPAQSQSPHLPNSSTLNRQIAQSVPPIESGRSSNSELTPSVITRTGLPERTSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00585626;
90% Identity
iTF_00602245;
80% Identity
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