Basic Information

Insect: Drosophila phalerata
Gene Symbol: -
Assembly: GCA_951394115.2
Location: OX596005.2:25564381-25568002[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.00023 0.023 15.7 3.3 2 23 762 783 761 783 0.96

2 4 4e-06 0.00039 21.2 1.4 1 23 789 813 789 813 0.97

3 4 5.1e-08 5e-06 27.2 2.9 1 23 819 841 819 841 0.99

4 4 0.00023 0.023 15.7 4.9 1 23 851 873 851 873 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.00023	0.023	15.7	3.3	2	23	762	783	761	783	0.96
2	4	4e-06	0.00039	21.2	1.4	1	23	789	813	789	813	0.97
3	4	5.1e-08	5e-06	27.2	2.9	1	23	819	841	819	841	0.99
4	4	0.00023	0.023	15.7	4.9	1	23	851	873	851	873	0.97

Sequence Information

Coding Sequence: ATGTCCAATGTGCGCTGCATTAACTTTTGGGATCTGTGCCGCATCTGCACGGCCAGCAGTGAGCAAAagattaacatttactcatccGATGGTCGCGCCAAAAATCTCAGTCATAAAATTGCCGAGTGTCTTCCAGTGCAAATTGATGAGAAGGACCGTCTGCCCAAGGTAGTCTGTGCCCAGTGTGCCCACCAAGTGGAACAAATGTACGAGATGCGAAATATTTCGAAAAACTCGCAGACAATACTCAGCAATTGGCTTAATCATCGCACACTGCAGACCGATGACAAGGTGTTCATCAAAGATGCCATCAATGATGCGGGCAAGAGTCTTAATGTGGTAGGCGTTGCCCCCCAAAGCAGCAACCAGCCCAACGATCTGCTGAGCAGCATCATCCAGGCAGTTGGCATGCAGGTGCAGCAACAACCGctccagcaacagcagcaatacaCAATTACTGTTGACAGTCACGTGCAGTCACATCCGCAGCTCCCTCCCCCTCCGCCACCCCAGCAGGAAGTCAAGAGTGAGAAACAAAACACCCTGGAGGAGTTTATACGTCTCAAGCCCGACATAAAAATCACGCCGCTGGGGAAAAAGGACAACGTAAACAGCTCACCTGGTACGAGTTCCGTGACCAACagcaaacagcagcagcaccagcaacatcatcaacaacaacagcagcagcatcaaccacaacaacaacaacagttgtcGGCGCAGACGCTAACAGCAGTTGCTGCTCCAGCAGCACAAATACAATTGCAACCGCAGCAGCTTAATGAGCTCAATGTATTGCTACAACAACAGGCGCTCTTGCAGCAGCTTCAACAGTTGCAGGCTCAGTCGCAGACACAGTTTAATAGTTGTGCCGATGACGGCATGGGATCCGCTGACAAGAAACCTAAACTGAACTTTGTGCTCTCGTCACCAGCGGCAGCTCCACAATTTCCTGGAAGCTTGCAACAGTTTGGCAGCCTCAGTGGAGCACAGCCCCAAATTCAACTGCAACTTCTGcctggtggtggtggtggaaCTGCCAGTAATGCAACAGCTGTCCAGCAAACACAGCAGTTTAATGCTGCAGCTTTACTCTCCAGCCTGACTGGCACTCAGGTTGTCGGTGGCAATGGAGCTGCCAATATGCTCTCGCCTAACAAATGCTTCTTACCGATTACCATCCGTGATGAGAACTCTGATCAGCAGATTGTGGCGCATATAGACACCAAGAATCTGGTACTGCCCACCACATACCAAGTGCAAATGAAGCTGCAGCCCCAATTAGCCACTGCCGATGGTCAGCCTATTATGCAATTAACGCCGACTTCCATTCCAGCCACATTGCAGTTGACTCCACAAACTCTCGGCAATGCGACATCGTTTCAAACAGCGTCgacaatacaacaaaatcAGTTCCTTcaacatcaaccacaaccacaacaacaacagcagcaacatcaaacACAACAATTGCCGCCTAATACAGCGCAAGTTACTTCACAACAAATCATTAGATCTCCGCGCTCAAATCCGATTAATTCCCAATTGATCATTAGAAATGTTAGCTCCGAGCCGAGCACACCAACGAGCAGCAACACAGATGCTTCGGTCAAGTTCAAGACGCCATCGCCGCGgcagcaaccacagcaacaggtTAAATATAAAACCACACCGCCAAATGTGACTCCAATTGGTGCAgttgttgctactgctgctgcttccaATAATAGTGCCAACACGGAGTACAACAAGCGAGTGGGGCTGGTGAAGCAGCAGCCGACGACAACGTCAAACAATGTGGCTGCACTGCAACGGCTTTCATCCAACACAACGATCACTAAGCTGACCAAACCACAGCAGTCTGGGACGAGCAATAAATTGCCggtattaaataaacaaaatattaccATCAGTCGCATCTCAACGCAGGCACCGCCCAAACCAGAACCTAAGCCGGCGCCAGTTGCAGCTCCCTCACAAGTTCCATCAACACCTAAGCCACAACCTTTGCCACCGCCAGCTCTGGCAATGCAACAACTGCCACAGCCAGTGACAACCAATGTAGTCACAAGTATTGCAAACCAAAGAAAAATTAATCGCAAGCTGCCAGAGCAACAAGTGAATCAGAGATTAAAGACCGCACGTCCGCAGCAACAGATTCTGCCTGTACCCGCGCAACAAACGACGACACCGtcccaacagcagcagcagcagctgcaacaacaggtGACCAACACTTTGGCCAGTGAGACGCCCGCAGCGACACCAGCCAGTGCACTTACCTGTCCCACCTGCCGACGCGAGTTCAAGAAGAAGGAGCATCTCACACAACATGTGAAACTTCACGCGGGTCTCCGTCCCTTTAAATGCTCAGAAGAAGGCTGTGATAAAGCTTTCAGTCGCAAGGAGCACTTGTCCCGTCATCTGGTATCTCACTCTGGCCAGAAAATGTTCACTTGCGAGGAATGTAAGAAGCCCTTCTCGCGCAAAGATAATCTCAACAAGCACAAACGCACACACAGCGCACAGCCTGGCGAGACTCGACTGCACAGCTGTGAAATTTGCAATAAAAACTTTGCATCCAAGCAACATTATGAGAAGCATCGCGAGATGCATAAGAAATCACGTCTAGATAATGCAGCACCAACCACACAGCCAGCAGGAGGAGGTCATCAAGCTGCTAAGACACAAGAGATATATGAGGTGAAGTCAGCAGCACCTGCAACTCCTCAAGCCCAAACACAGCCTGCGCAGACACAAATGcaaattcaacaacaacaacaacaacaacagcctcaAATAATGCACGTGGATCTGGATGGGAGCACCATAACAATCACACAGGCCTCTGATTCTAGTATGCAAACATCTCTGGCAAACTTTGTTCAACTGGGCTTTTCACAATTTCAGAACACCAGCGGCCCTGCAAACCAAATAGTTTGTAAACTTGAAAAGTAG
Protein Sequence: MSNVRCINFWDLCRICTASSEQKINIYSSDGRAKNLSHKIAECLPVQIDEKDRLPKVVCAQCAHQVEQMYEMRNISKNSQTILSNWLNHRTLQTDDKVFIKDAINDAGKSLNVVGVAPQSSNQPNDLLSSIIQAVGMQVQQQPLQQQQQYTITVDSHVQSHPQLPPPPPPQQEVKSEKQNTLEEFIRLKPDIKITPLGKKDNVNSSPGTSSVTNSKQQQHQQHHQQQQQQHQPQQQQQLSAQTLTAVAAPAAQIQLQPQQLNELNVLLQQQALLQQLQQLQAQSQTQFNSCADDGMGSADKKPKLNFVLSSPAAAPQFPGSLQQFGSLSGAQPQIQLQLLPGGGGGTASNATAVQQTQQFNAAALLSSLTGTQVVGGNGAANMLSPNKCFLPITIRDENSDQQIVAHIDTKNLVLPTTYQVQMKLQPQLATADGQPIMQLTPTSIPATLQLTPQTLGNATSFQTASTIQQNQFLQHQPQPQQQQQQHQTQQLPPNTAQVTSQQIIRSPRSNPINSQLIIRNVSSEPSTPTSSNTDASVKFKTPSPRQQPQQQVKYKTTPPNVTPIGAVVATAAASNNSANTEYNKRVGLVKQQPTTTSNNVAALQRLSSNTTITKLTKPQQSGTSNKLPVLNKQNITISRISTQAPPKPEPKPAPVAAPSQVPSTPKPQPLPPPALAMQQLPQPVTTNVVTSIANQRKINRKLPEQQVNQRLKTARPQQQILPVPAQQTTTPSQQQQQQLQQQVTNTLASETPAATPASALTCPTCRREFKKKEHLTQHVKLHAGLRPFKCSEEGCDKAFSRKEHLSRHLVSHSGQKMFTCEECKKPFSRKDNLNKHKRTHSAQPGETRLHSCEICNKNFASKQHYEKHREMHKKSRLDNAAPTTQPAGGGHQAAKTQEIYEVKSAAPATPQAQTQPAQTQMQIQQQQQQQQPQIMHVDLDGSTITITQASDSSMQTSLANFVQLGFSQFQNTSGPANQIVCKLEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00608719;
90% Identity: iTF_00507154; iTF_00523230;
80% Identity: -