Basic Information

Insect: Drosophila phalerata
Gene Symbol: -
Assembly: GCA_951394115.2
Location: OX596008.2:19262501-19264164[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0039 0.39 11.8 4.9 2 21 265 284 265 285 0.93

2 9 0.00021 0.02 15.8 0.6 1 23 303 326 303 326 0.94

3 9 3.8e-06 0.00038 21.3 4.7 2 23 332 354 332 354 0.97

4 9 2.1e-05 0.0021 19.0 0.5 1 23 360 382 360 382 0.98

5 9 3.5e-08 3.5e-06 27.7 1.1 1 23 388 410 388 410 0.98

6 9 0.088 8.7 7.6 0.2 1 23 416 438 416 438 0.97

7 9 0.0027 0.26 12.3 6.4 1 19 444 462 444 462 0.99

8 9 4.7e-05 0.0046 17.9 0.5 1 23 473 497 473 497 0.98

9 9 0.021 2.1 9.5 4.5 3 23 505 525 504 525 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0039	0.39	11.8	4.9	2	21	265	284	265	285	0.93
2	9	0.00021	0.02	15.8	0.6	1	23	303	326	303	326	0.94
3	9	3.8e-06	0.00038	21.3	4.7	2	23	332	354	332	354	0.97
4	9	2.1e-05	0.0021	19.0	0.5	1	23	360	382	360	382	0.98
5	9	3.5e-08	3.5e-06	27.7	1.1	1	23	388	410	388	410	0.98
6	9	0.088	8.7	7.6	0.2	1	23	416	438	416	438	0.97
7	9	0.0027	0.26	12.3	6.4	1	19	444	462	444	462	0.99
8	9	4.7e-05	0.0046	17.9	0.5	1	23	473	497	473	497	0.98
9	9	0.021	2.1	9.5	4.5	3	23	505	525	504	525	0.95

Sequence Information

Coding Sequence: ATGTTACCGATAACTCGTGCCACAGTTGACAACTTCTGCATTGTTTGTTTGCAAGATTTACAGAAATCTGGAGACACAAAACACCTGCATCATGATTTAAAAGATGATCCACAGTTATTACGCGTCTTTAATGCAATGGTTAATGGAGGGGAAGCAGAGGGAACGTTAATAAACTTACCGAAACAATTGTGTCCTTCCTGTCACACAAAAGTTGTCATGTTTTGCAAATTCGCTGAAATGTGCATTTGCAGCAGCATCGCATTAGACGAATTGACGGAAGAGGAGCACAAAGCCATTAATGAGGACAATGTGAACAGGATTTGTGTGACATGTTTTAAATTGAAGCCAGACAATACAAAATACTCTTTGCTAAATCAATGGGAGCTACAGGATTTGTTGGCACTTATCTTTATGGGAATGAAGAAACAGAAACAAGGTTTAAAGACAGTACAACCCAAAAACGTATGTGAACTTTGctctcaaaaatcaaaaacttttttggaaTTCCAAAGGCGCTTAAAGGAAAGTCAGCTATATTTGCAATCCATATTGTCAAATGCAGACGATTTAACAGATGACAACCCAAGTTGCCAAATTGTTGAGATACAAGCAACTGATAAGAGttcCGGGAATTCAACAGAGCAGGAAGATATTGTTGGCAACGACAGTGAGCCTGAAATCGATCATTTAATATTGAATACAAACAATGAAAAAGAAGATCCCTTTGAGTTGAGTGATATAAACTTAAAGGATTCAATTTCAAGCGAAGAAATCTTAGATACTTCATTTCGTCGCTGTGAAAAATGCAATCGAACATTTCGCAAGTTATCGTCATTTAAAGCTCACAAATGTCGAGTTCAATGCAATAATGGATACACTGATATAATCATTGAAGACCAGGATTTATTTACCTGTGACATTTGCCAGAAGAACTACAAGTCAGAAGCTCTGCTGAAAACTCACGCTTATCGAGTACATTGCAAAGCAGATAATACATGTCCATACTGTCAACGGGAGTTCAAGCAAAAGCATCATCTGAAAGATCACATCAGATCGGTTCATGAAGGCATACGACCCTATAAATGTAGCTACTGTGAAAAGTCATTTGGATTACCTAAGACTTTACGGGTACATCTAATGGGACACACGAACGAGCGTCCATTCCAATGTGATATTTGTGAGAAAACATTTCGTCAAAAGGCAGAATTGAATCGTCATATAAAGAACCATTCGGCCGATATACAGTTCCGATGTCCGGTTTGTTCCCAAGGCAAGACAAGCCAAGAAGAACTGGATGAGCACTTGACCCGACACAATAATCGGGAAGGATACCAATGCAGCAAGTGTGGGCGTAAATTTACCAAACTTTGTCACTTGAAAAATCATGATGATGCAGTGCATCTCAAGTTGCGTCCATTCAAATGTGACTACAACAACTGCGGTAAAGCATTTGCAGCCCGCAAAACTCTTCAAATACATCAGCTAACACACACTGGCGACTGTTCAAATATCTGCAATGTTTGTCATAAAGAATTTAGCTGTAAAGCAAATCTTTTAAGGCATTTCTACATGCACAAAACCACGATTAAACAAGAAGCAGTTGCGTGA
Protein Sequence: MLPITRATVDNFCIVCLQDLQKSGDTKHLHHDLKDDPQLLRVFNAMVNGGEAEGTLINLPKQLCPSCHTKVVMFCKFAEMCICSSIALDELTEEEHKAINEDNVNRICVTCFKLKPDNTKYSLLNQWELQDLLALIFMGMKKQKQGLKTVQPKNVCELCSQKSKTFLEFQRRLKESQLYLQSILSNADDLTDDNPSCQIVEIQATDKSSGNSTEQEDIVGNDSEPEIDHLILNTNNEKEDPFELSDINLKDSISSEEILDTSFRRCEKCNRTFRKLSSFKAHKCRVQCNNGYTDIIIEDQDLFTCDICQKNYKSEALLKTHAYRVHCKADNTCPYCQREFKQKHHLKDHIRSVHEGIRPYKCSYCEKSFGLPKTLRVHLMGHTNERPFQCDICEKTFRQKAELNRHIKNHSADIQFRCPVCSQGKTSQEELDEHLTRHNNREGYQCSKCGRKFTKLCHLKNHDDAVHLKLRPFKCDYNNCGKAFAARKTLQIHQLTHTGDCSNICNVCHKEFSCKANLLRHFYMHKTTIKQEAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00523148;
90% Identity: -
80% Identity: -