Basic Information

Insect: Drosophila phalerata
Gene Symbol: -
Assembly: GCA_951394115.2
Location: OX596008.2:22893119-22895402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.8e-05 0.0018 19.1 1.9 1 23 84 106 84 106 0.98

2 15 0.0017 0.17 13.0 2.5 1 23 112 134 112 134 0.96

3 15 5.6e-05 0.0056 17.6 0.2 1 23 139 161 139 161 0.98

4 15 8.2 8.1e+02 1.4 1.5 2 14 168 180 168 181 0.87

5 15 2.9e-05 0.0029 18.5 0.1 2 23 185 206 184 206 0.97

6 15 0.00013 0.013 16.5 5.7 1 23 212 234 212 234 0.98

7 15 0.00011 0.01 16.7 0.2 1 23 240 263 240 263 0.97

8 15 0.075 7.4 7.8 0.3 1 20 489 508 489 509 0.89

9 15 2.1e-06 0.00021 22.1 1.5 1 23 523 545 523 545 0.99

10 15 1.8e-07 1.8e-05 25.4 1.0 1 23 551 573 551 573 0.99

11 15 1e-06 9.9e-05 23.1 2.7 1 23 579 601 579 601 0.99

12 15 9.6e-07 9.4e-05 23.2 3.4 1 23 611 633 611 633 0.98

13 15 2.6e-05 0.0026 18.7 5.1 1 23 639 661 639 661 0.99

14 15 2.9e-07 2.9e-05 24.8 5.1 1 23 667 689 667 689 0.99

15 15 3.8e-06 0.00038 21.3 5.1 1 23 695 717 695 717 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.8e-05	0.0018	19.1	1.9	1	23	84	106	84	106	0.98
2	15	0.0017	0.17	13.0	2.5	1	23	112	134	112	134	0.96
3	15	5.6e-05	0.0056	17.6	0.2	1	23	139	161	139	161	0.98
4	15	8.2	8.1e+02	1.4	1.5	2	14	168	180	168	181	0.87
5	15	2.9e-05	0.0029	18.5	0.1	2	23	185	206	184	206	0.97
6	15	0.00013	0.013	16.5	5.7	1	23	212	234	212	234	0.98
7	15	0.00011	0.01	16.7	0.2	1	23	240	263	240	263	0.97
8	15	0.075	7.4	7.8	0.3	1	20	489	508	489	509	0.89
9	15	2.1e-06	0.00021	22.1	1.5	1	23	523	545	523	545	0.99
10	15	1.8e-07	1.8e-05	25.4	1.0	1	23	551	573	551	573	0.99
11	15	1e-06	9.9e-05	23.1	2.7	1	23	579	601	579	601	0.99
12	15	9.6e-07	9.4e-05	23.2	3.4	1	23	611	633	611	633	0.98
13	15	2.6e-05	0.0026	18.7	5.1	1	23	639	661	639	661	0.99
14	15	2.9e-07	2.9e-05	24.8	5.1	1	23	667	689	667	689	0.99
15	15	3.8e-06	0.00038	21.3	5.1	1	23	695	717	695	717	0.98

Sequence Information

Coding Sequence: ATGGACATAAGTTGCGTGAAGGTTGAGCCTGAGCCAGAGGATGAAACGCTATGGGAATCGGACTTGGGCGTTAACAGCATTGTGTTCGAAACCGAAACTACTTCAGAGATCGACATAGGACCAATCAAGATAGAGCCAGAGACTACCACAAAATGCCAGGTTCCGAGTTCCGTCAGAAGCAGTACAAGTCAGACGAAGAAGAGGCATCCTGCACCTGTTCCTACTGCTGCGAGACGTTCCAGAGTTTCCTATCAGTGTGTCCACTGTCCGCGTCACTTTGAAAGAAGCGATGAACTCGAGATTCACACACAGATTCACACAAACAATCTGCTTTACAAGTGCTCTCAGTGTCCAAATAGTTTCTCTCACAAATCCATATTCACGGCACACATGTACGCTCATGGGAAGTTTCCCTACGAATGCCCAGAATGCGCGAAGGGATTCTTGAGGAACAGCGATCTGAAGAAACACGCTCGACTTCATGTTGATAAGCGTCTACCCAAATGCCCATTATGTCCAAGGTACTGCACCCACAACGGTAGTCATCCCATTCAGTGTCCACAGTGTCCTCGCAGCTTCATGAAGAGTGAAGAACTAGAGATACACCTTCAGATCCATAGTGATAAACTTCCCTACAAGTGTCCCCACTGCCCGAGCAGCTTTGCGCATAAATCCAATTACCTTTCTCACATTTGTGAACACACGGGTGAATTTCCCTACAGATGCCAGGAGTGCTCGCAAGGATTCATGCGGAGAATTGATCTTATTCGACATCTTCAGATAATTCATTGTGAGCTATTCATTAATTATCGACAACGCTTAAAGAGATGCACAAATAGCTTGACATCAGAACTAAAAAATAATCTCAATCAGAAGGAAATGGAACAGGAACAGAAAAAGGAGCCGAGTGAATCAAGCTTGCAGACGCCTGCTATAAAACCTAAGTCAAAAGGGAATACTGAGAATGGTACGTTAAGTAGCCAGAAATTGAATACAAAAGAAACAATCGAACAGGGAAAAGAACAGGAACAGGAGACACTTAAATCCAGTTTGCAGTCGGCTTCTATAAAAACTAAAGCTAAAACGGATAAAGAAAGTAGTAAGTTAAGCAACCAGGAAATGAACATGAAAGAGGAAATCATAGAGAACAGTTACAACAAGGAGGATAACGAGCAGGAACAGATGATAAAATCCAGCTTGAATGCACCTGCTATAAAACCCAATACTGAAAACGATTCTGGGCATAGCCAAAACGTAAATGGTCTAATGAATGATCCTTCGAATAAAGTTACAAAAGACCAGAATCAAAGCagagacaaaattaaaaatagtacCTTAGATAAGATGGACGTTGAAATATTATCGAGTGATACTAATATTGTAATTGAAACACAACCAATTGAGGTAAATGTTAAAGCCAAATCAGAGGACCAGGCTTTAATAAATTCAGATGCAAATCCAACCCACATGTGCAAGATCTGTAATAAGGAATTCTTGAACATTGAAGATTTGCGCTTGCATGAGAAATGCTATACACATTCGAATAGACAGTTGGGTATCCGGCCGTTCAAATGTGATCTCTGCTCGATGTCCTATACACAAGCGTTTAATCTTACGGTGCATATGCGCAAACATACGGGAGAACGTCCATATCAGTGTCCTCACTGTCCGCGCAATTTTATACAGAATTCGGGTTTGAAGGTGCACATTCGACAACACTCCGGCGAGCGACCTTATAAATGTGCCCACTGTCCACGCACTTTTGCCAATAACTCAAATCAAAGGAAACATATGATAACCCACGCTTCGGAGGTGGCCAGTTATCATCCTTACAAGTGCCCACACTGCCCAAGAACCTTTGTACAAAATTCCCATTTTATTACACATGTTCGCGGACACACGGGTGAACGTCCATATCAATGCACCCACTGTTCCATGGGCTTTAAAGTTAGTCACGATTTAACGAGACACCTACGCAGTCACACTGGAGAGCGTCCCTTTAAGTGTCCTCATTGCCCGAAATCCTTTGCTCAAAACTCACATTACCATGCGCATATTCGTGTACATTCCGGGGAACAGCCCTACAAGTGTCCACACTGTcccaaaacatttactcagaATTCCTGTCGCAAGGCGCACATTCGTGAacatttactttga
Protein Sequence: MDISCVKVEPEPEDETLWESDLGVNSIVFETETTSEIDIGPIKIEPETTTKCQVPSSVRSSTSQTKKRHPAPVPTAARRSRVSYQCVHCPRHFERSDELEIHTQIHTNNLLYKCSQCPNSFSHKSIFTAHMYAHGKFPYECPECAKGFLRNSDLKKHARLHVDKRLPKCPLCPRYCTHNGSHPIQCPQCPRSFMKSEELEIHLQIHSDKLPYKCPHCPSSFAHKSNYLSHICEHTGEFPYRCQECSQGFMRRIDLIRHLQIIHCELFINYRQRLKRCTNSLTSELKNNLNQKEMEQEQKKEPSESSLQTPAIKPKSKGNTENGTLSSQKLNTKETIEQGKEQEQETLKSSLQSASIKTKAKTDKESSKLSNQEMNMKEEIIENSYNKEDNEQEQMIKSSLNAPAIKPNTENDSGHSQNVNGLMNDPSNKVTKDQNQSRDKIKNSTLDKMDVEILSSDTNIVIETQPIEVNVKAKSEDQALINSDANPTHMCKICNKEFLNIEDLRLHEKCYTHSNRQLGIRPFKCDLCSMSYTQAFNLTVHMRKHTGERPYQCPHCPRNFIQNSGLKVHIRQHSGERPYKCAHCPRTFANNSNQRKHMITHASEVASYHPYKCPHCPRTFVQNSHFITHVRGHTGERPYQCTHCSMGFKVSHDLTRHLRSHTGERPFKCPHCPKSFAQNSHYHAHIRVHSGEQPYKCPHCPKTFTQNSCRKAHIREHLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -