Basic Information

Insect: Drosophila phalerata
Gene Symbol: ct
Assembly: GCA_951394115.2
Location: OX596006.1:34325539-34344562[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.9 1.2e+04 -3.1 0.0 3 30 598 626 596 632 0.71

2 4 5.7e-27 7.5e-23 80.9 0.0 3 72 749 819 747 824 0.95

3 4 5.7e-32 7.4e-28 96.9 0.0 3 77 1244 1319 1242 1321 0.96

4 4 3.5e-31 4.6e-27 94.4 0.0 3 76 1503 1577 1501 1580 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.9	1.2e+04	-3.1	3	30	598	626	596	632	0.71
2	4	5.7e-27	7.5e-23	80.9	3	72	749	819	747	824	0.95
3	4	5.7e-32	7.4e-28	96.9	3	77	1244	1319	1242	1321	0.96
4	4	3.5e-31	4.6e-27	94.4	3	76	1503	1577	1501	1580	0.96

Sequence Information

Coding Sequence: ATGACACGCAAATTACCAATTGGCATTATGTTGATTAGGCACACGTTTCGACAAATCGAAATCGGGATTAAAGCACTTTTGGATGAGTTGCAACACCTACGCGCTCTGGAGCAAACTCACCTTGTACAAATCCAGAGGCTCGAGGAGCATTTGGAGGTGAAGCGACAACACATAATGCGATTGGAGGCGCGTTTGGATAAGCAACAGATCAATGAGGCATTGGCCGAGGCAACTGCATTGGCGGCCGCTGTAAATGCGGCAGcaacaaataataacaacaacaataacaacaatagcaatatcaatatcaataataacaacaacagtcacAGTAGCCAGAGCAGTGAGCACAACAacgagacaacaacaacaacaacaacagcgacagtgttcaatacaacaacaacagatctTACATCAACTCATCAgcacaatgatgatgatgacgatgacgatgataaTGATCGGGATCGTGATCATGATAACGAGCTGCGAGATgccgatgatgatgacgatatGGAAATTACAGGCaacgagcaacaacaacaacatgcagTTTCCAACAATCGGCATGAGGATGATCACGATGAGGAGGAATCCGAGGAGCACGATGTCGAAATGTCCAATGCCACAGCCACAGCGGATAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGATCTGAACGTGCTCAGTCCACAGTCGGCCCTTGCCGCTGCCGCCGCGGCCGCCGCAGCCGCTGCCTGCGCCAACGATCCGAACAAATTCCAAGCCCTGCTCCTGGAACGCACCAAGGCGTTGGCTGCCGAGGCGCTTAAAAATGGCGTCAGCGATGCATCGAATGCCAATAGCGATGAACAACAACGTGAaacagaggcagcgacagctaaaattgtggcagcaacagatgatgatgaagaagatgatgaagaagcagcagcagcagcagcagtcaaGTCACAGCCTGAAACAAGTGAAAATGAAACGGAAACGAATGTAAATGAAACATTGCCCGATGCCAATTTGCAGCCAAAAGTCGAAATTATTGACACTGACGATGCCGATGATGGCAACCCTGCCACGGCGATTGAGGCGACAGGTCAAACGTTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTtgaaacaaacacaacaacaacaacagccgcagcagccgcagcagccgccgcagcagcagcagttgttgctgcaactggGAGCAAAACGCCAACAATTTATCAAAATGCCAATGCGGTGCAGCAGCAACTATTGCCGccaccaccgccgccgccgccacagcagcagcagcagcagctgcaacaacagcaacagcactttgccacgcaacaacaacaacaacagcaacatcaacattatcagcaacaacaacaacagcaacagcaacagcaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCAACTCGACTAGATGCCGGCTCacaccaccaacaccaacatcaGCACCAGCATCCactccagcaacaacagcagcagcagcaacagcaacagcaattattgcagcagcaacatcatcataatagcagcaatagcagcaacagcagcgcaCCTGGCGGTGATCCACTgaaccatcatcatcatgcgCATCATCACGCCCATGGGCATGGTCAATTGTTGCATGCGACCCATCATTTGCATCATGGCGGCGACTCCAATTCATCCAGCGCCAATAGCACACCGAACAGTACCGCTCAGCTGGCGGCAAGTATTGCCAACACGTTGAACGGCAACAAGTCGCTGTTGCAAGCAGCAGCCGCTGCCAATGtagccgccgccgccgctgtTGCCGTGGCCGaggacaataacaacagtctGACGCCAAATGCGAATGCCGCAGCTGCCGCCGCGGCAATGGCCGCACATGCCCAACATGCGGCCGCCCTGGGTGCCCCAAGTTTCTTGCCCAACCTGCCCAACCTGCCCAGTTTGCCGGCCTTTCAATTTGCCGCCGCCGCAGCCGCTGGACAGGATGCTCGGGCGCATTTTCGTTTCGCTGATGCggaattgcaattgcaaccgGGTGTCTCGATGGCAGGTCGATTGGGTGAATCCCTTATACCCAAGGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTACGCTACAATATGGACAAGTATGCGAATCAAGCCCTCGACACACTTCACATCTCGCGACGCGTCCGGGAATTGTTGTCGGTGCACAACATTGGTCAACGCCTGTTTGCCAAATACATTTTGGGCCTGTCCCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTGACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCATGCCTGGGCCTGTGATGATAACGCCGTCATGCTGCTCAAATCGCTCATACCCAAGAAAGATTCGGGACTGCCACAGTATGCAGGACGCGGCGCTGGCGGCGATGATTCCATGTCTGAGGATCGCATTGCCCACATACTCAGCGAGGCATCATCGCTGATGAAGAGCAATGCGGCTGCcgcccagcaacaacaacaacaggagcatCAGCGACGTCATATTGGTGGCGATGATACGCACAGCAATGAGGACAGCAAGTCGCCGCATCAGAGTTGCACTTCACCATTCTACAAGGTCGATCAGCAgctgaagcagcagcagcagcagcaacaacaacagcaacaacagcagcagcaacaacaattgcatgtCTCGGAGCATGCGCAACGCGAGCAACGTGAAGCGGCGGCTGCAGCGGCTGCCGTTGCCgttcatcagcagcagcagcatcgcGAGCAGCGGGAACAGCGCGAGGCGGCACAgcgggagcagcagcagcgcctCCGGCACGAGGATTTGGCTCAGGACAAGATGGCGCGTCTATATCAGGAGCTGATGGCTCGCACACCGCGTGAAGCATCCTTCCCAAGCTTTTTGTTGTCGCCGTTCTTTGGTGGCGCCGCCGCCATGCCGGGAGCAGCAGCCAATCCCTTTCCCGCAACAATGGCCGCCGATGAGAATATGCGTCATGCGTTCGAGCGGGAAATCGCcaagttgcagcaacaacatcagcagcaggcGCAGGTGCAGGCCGCCGGTTTTCCCAACTTTTCCAGTTTGATGGCACTGCAGCAGCAGGTGTTGAACGGTGCACAGGATCTGTCGCTGGCCGGCAAGGACATCAAGTTGAATGGCCAGCGATCGTCGCTGGATCAAcacagtggcagcagcagctgcagcaaggATGGCGAACGTGGCGATGATGAGCGTAGCTTTGCTGCCTTGCCACATGCCCGTAAATCGGACGGGGGCAATACACCGGCACCGCCAGCACCACCAGCACCGCCAGCACCACCGAACAGCAGCAATCCGAATGCGTCAAGCAATGCTGGTGTTGTCGTCAGTGGCAATCACGGCAGCAATTCGGCAGCGCCGAGTCCATTGAGCAACTCGATCTTGCCACCGGCATTGAGCAGCCAGGGTGAGGAGTTTGCGGCAACAGCGAGTCCGTTGCAACGCATGGCATCCATAACAAATTCACTGATCACACAGCCACCGGTGACGCCGCACCACTCGCAGCCACAGCGACCCACCAAGGCGGTACTGCCACCGATCACACAGCAACAGTTCGATATGTTCAACAATCTCAACACCGAGGACATTGTGCGACGCGTCAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTCTGTTTGGTGAGTCCGTGTTGGGACTGTCGCAGGGTTCCGTTTCCGATTTACTTGCCCGACCCAAGCCGTGGCATATGTTGACCCAAAAGGGTCGCGAGCCCTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCGGTGCACAAGCTGGTCGCAAGCCAGTATAAGATTGCCCCCGAGAAGCTGATGCGCACGGGCAGCTACAGTGGCAGTCCGCAGATGCCACAGGGATTGGCCAATAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCGGGACAGGCGCAACACATAATGCAACAAATGCAGGCAGCCGCCGCCATGTCAGCGGccatgcaacaacagcaacaggcagCCGCCGCACAAGCAGCAGCCGTGCAACAGGCCCAGGCACAGGCCGTTCAGGCCGTTCAAGCCGCACAGTTGTTGCATCATCAGAATATGCTGCTAACATCGCCGGGCTTGCCACCGCAACATGCCATCAGTTTGCCAGCGGCCAATACGCCCAGTGGCCAACCTGGTGTGGGTGTGAATGCGCCGGGAGGCGTGGCCACGCCCATTAGTGGCGAGAAGAAGCCAATGATGATGCCGGTGCATGGTGGGGCACATGCCCCAAATGCGATGCGCAGCCTGCATCAGCATATGTCGCCGACGGTCTATGAGATGGCGGCCTTAACCCAAGATCTGGACACGCACGACATAACCACAAAGATCAAGGAGGCCCTGTTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCAGTGCTGGGACTGTCGCAGGGATCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCCTGGCACATGCTGTCGATCAAGGGACGCGAACCCTTCATACGCATGCAACTGTGGCTGAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGCAGGGAGGCGAGCAAACGGAGACGCAGCACTGGACCAAATCAGCAGGACAACAGCAGCGATACGTCCAGCAATGACACTAACGATTTCTATACCAGCAGCCCTGGACCCGGTTCGGTGGGTTCATCGGTGAGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGCTTGGCCTTTGCCCTCGATCCGTATCCCAATGTGGGCACCATCGAATTTCTGGCCAATGAGCTCAGTTTGGCCACCCGCACCATTACCAATTGGTTCCACAATCATCGCATGCGtttgaagcaacaggtgccgCACGGTCAACCCGGCCAGGATAATCCGATACCCAGTCGCGAGAACACAAATGCCACACCCTTCGATCCCGTCCAGTTTCGCATTCTGCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGCTTGAGTGGTGCGCCCATCCCATACCCACCGTACTTTGCCGCCGCCGCTCTGCTCGGCCGCAGCTTGGCCGGCATACCGGGCGCCGCAGCGGCGGCTGGagcggcagcagcggcagccgCCGCTGTGGGTGCGGCTGGAGGGGATGAGTTGCAGGCATTGAATCAGGCGTTCAAGGAGCAAATGAGCGGACTGGATTTGTCGATGCCAACGCTGAAGCGTGAGCGCAGCGATGACTATCAGGATGAACTGGAGCTGGATGCCAGCGGTCACAACATGAGCGACAATGAGTCCATCGAGGGTGGCCACGAGCCGGAGCATACGCCCATCTCCGACTACGAGAAGGCGCTGCAAAAGTCGGCGCTTGCCtccgccgccgctgccgcagcCTACATGAGCAATGCGGCACGCAGTTCCCGCCGCAAACCCGCCGCCCCACAATGGGTCAATCCCGCTGGCAGTGGCACTCCCACAgcggcagctgctgttgcggcggtcgctgctgctgccgctgcggcTGCTGCCGTCGCTGGCGGCGATAGCAGCGCCGAGCGGATTATCAACGGCGTCTGTGTGATGCAGGGATCCGACTACAGTCGCGACGAGAGCGACAGCATCAAAGGCGCCAACGATGCGGGCAATGAGTTGGACAACGATGAGCATGCTCAGCTCGAGATTGATCAGCGTTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAggaggatgatgatgaagagcagcagcagcagcagcagcagcagcaaccgttGCAGCAACAGGAGGAGAGCGGACGCCTCGATGGCGATGCGGCTGAGAAGCAACTGAAGGTGATCAATGAGGAGAAGTTGCGCTTGGTGCGTGTGCGGCGTCTCAGCAGCAACGGCGACGCCGAGGAGCATTGTGCGGCAGCGCAGCAAGCGACGGTTGCCGCGAcgccagcagcagctgcatgGAACTATTAA
Protein Sequence: MTRKLPIGIMLIRHTFRQIEIGIKALLDELQHLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNSNININNNNNSHSSQSSEHNNETTTTTTTATVFNTTTTDLTSTHQHNDDDDDDDDNDRDRDHDNELRDADDDDDMEITGNEQQQQHAVSNNRHEDDHDEEESEEHDVEMSNATATADSNELKIKKEQHSPLDLNVLSPQSALAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGVSDASNANSDEQQRETEAATAKIVAATDDDEEDDEEAAAAAAVKSQPETSENETETNVNETLPDANLQPKVEIIDTDDADDGNPATAIEATGQTLEEQLVNSYWRRGFETNTTTTTAAAAAAAAAAAAVVAATGSKTPTIYQNANAVQQQLLPPPPPPPPQQQQQQLQQQQQHFATQQQQQQQHQHYQQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSTRLDAGSHHQHQHQHQHPLQQQQQQQQQQQQLLQQQHHHNSSNSSNSSAPGGDPLNHHHHAHHHAHGHGQLLHATHHLHHGGDSNSSSANSTPNSTAQLAASIANTLNGNKSLLQAAAAANVAAAAAVAVAEDNNNSLTPNANAAAAAAAMAAHAQHAAALGAPSFLPNLPNLPSLPAFQFAAAAAAGQDARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRIAHILSEASSLMKSNAAAAQQQQQQEHQRRHIGGDDTHSNEDSKSPHQSCTSPFYKVDQQLKQQQQQQQQQQQQQQQQQLHVSEHAQREQREAAAAAAAVAVHQQQQHREQREQREAAQREQQQRLRHEDLAQDKMARLYQELMARTPREASFPSFLLSPFFGGAAAMPGAAANPFPATMAADENMRHAFEREIAKLQQQHQQQAQVQAAGFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDQHSGSSSCSKDGERGDDERSFAALPHARKSDGGNTPAPPAPPAPPAPPNSSNPNASSNAGVVVSGNHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPGQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAVQAVQAAQLLHHQNMLLTSPGLPPQHAISLPAANTPSGQPGVGVNAPGGVATPISGEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPEHTPISDYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGSGTPTAAAAVAAVAAAAAAAAAVAGGDSSAERIINGVCVMQGSDYSRDESDSIKGANDAGNELDNDEHAQLEIDQRFMEPEVRIKQEEDDDEEQQQQQQQQQPLQQQEESGRLDGDAAEKQLKVINEEKLRLVRVRRLSSNGDAEEHCAAAQQATVAATPAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00520420;
90% Identity: iTF_00575475;
80% Identity: iTF_00575475;