Basic Information

Gene Symbol
grh
Assembly
GCA_951394115.2
Location
OY729850.1:19002020-19037008[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 2.6e+04 -8.9 13.4 79 126 191 236 114 270 0.55
2 3 0.3 3.9e+03 -2.6 1.4 93 103 500 510 474 529 0.51
3 3 2.7e-63 3.5e-59 200.3 0.6 24 221 639 831 625 833 0.93

Sequence Information

Coding Sequence
ATGCAGGATGCAACAAACAGTTATGTTATATCCTACACCGACTGGATAACGGAGTCACGACGCGGCTACAGCCTGGAAGCAGAGCagtcaacgtcgacgtcgacgccgtCACAGcttcatcatcaacatcatccaCATCATCATGAtgatcagcagcagcagcaacaacaacatcatcattatgATCATCACTATGAGGCAGCCAAGGACGAGTTGCAGCACCTGCCACTGACTGCCGCAGGCCACTTGCAACCTCATGTGGCCAGCGAGTTGCAACAGCTTCCACATCCGCCTGCTCCTCCGCCTCCTCCTGCTGCTCCTTCTGCTCCTGCTCCCGCTGCACCAACAGATGCCACCGATTCTATctccgcctcctcctcctaTGCTGTTTATAGCTATTACCGGAATGTCGATGCTCAGCATGAGGAGGATCATCAGCAGCAGTGGAGCAATGCGAGCAACGCCGGCAAACTAAATGGACAGACCACACCTATCGATGTCTCTGGCCTATCgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCATCGTCGGCGACCACAACCGGCGTTGTgtccacaacaacaatctcgaatcagcagcaacatcagcagcagcagcagcagcaacaacagcagcaacaacaacagcagcagcaacaacagcaacagcagcatcaacaacagcaacaacaacaacaacaacatgccaGCGACATTGTAACCATAACCACAGCGGGTGTGGGGAGTGCAGGCTCAATAGTCTCTGCTGtcgtgcaacaacaacagcaacaacaacagcagcagcagcagcaacaacaacaacaacagttgctgaGCATCAAACGAGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAACATTGGCGCCGCTGCCAACGGAGGCGGCTCAGTGATAACGCAGAAGATATTGCGCGTGGATGCCACCAGAAGTGAGGCACAAATTAGCGATAatacagctgcaacaacaacaacaacaactgtaacaGAAGCAGCTGAAAccacaactgcaactgcaactagtCCCGCCAGTTCCACAGCAGATCTAGAGATGTATGCTACTACGGGCGGTACACAGATTTATCTACAGACCTCACATCAGAGCAGTACCGGACCCACCCAACAGAGCTCGTTGCAAGCGCAGAGTCCCAGTCCGGGTCCGTACATCACAACCGATAGCTATGGCATGTATACGGCCACCCGATTGCCGCCCGGCCCCCCGCCCACAACGACCTTCATAACGGAACCGTATTATCGGGAATACTTTGCACCCGATGGCCAAGGTGGCTACGTTCCCGCTGGTACCGCTCGCAGTCTCTATGGCGAGGATGTTTCTGTTTCGGCGGCGACGCAGGCTCAACCCGTTGGAGGTGTCTATGAGGCGCGCTTTACAAGCAATGCGCCCACCACAACCACAGTGCTTACCAGCAGTAATGCACACCATCAcagtcaacagcaacaacaacaacagcagcagcaacaacaacaacaacagcaacaacaacaacagcagcaggaacAGTCGGTGAAAAACGGTGGTACACCTTTATATGCCAAAGCCATAACGGCAGCGGGTCTCACTGTGGATCTACCGAGTCCCGATTCGGGCATTGGCACGGATGCCATCACACCGCGGGATCAGAATCACATACAGCAGTCCTTCGACTATACGGAACTTTGCCAGCCGGGCACCCTGATCGATGCCAACGGCAGCAGCATACCCGTCTCCGTGAACAGCATCCAGCAACGCACAGTGGTGCACGGCAGCCAGAATAGTCCAACCACATCACTGGTGGATACCAGCACAAATGGTTCAACACGTTCAAGGCCCTGGCACGATTTTGGCCGTCAAAACGATGCTGATAAAATCCAAATACCAAAAATCTTCACAAATGTGGGCTTTCGATATAATCTGGAGAGTCCGATTAGCTCGTCCCAGCGTCGTGAGGACGATCGCATCACCTACATCAACAAGGGGCAGTTCTATGGCATCACCCTGGAGTATGTGCACGATGCGGAAAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGCCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGACACTAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCTCACAATGCCATTGCCGTCTATTGGAATCCGCTCGAGAGCTCAGCCAAGATCAACATTGCCGTACAGTGTCTCAGCACGGATTTCAGCAGTCAAAAAGGTGTCAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTCGAGGATCCGCGAGATGCGACGGTCTTCCATCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGTGCGGAACGCAAGACGCGGGATGAGGAGCGACGTGCGGCAAAGCGCAAGATGACGGCAACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTGACGGACCGTTCCGAGTTCTATGGCATGCAGGATTTGGCCAAGCCGCCGGTGCTGTTCTCGCCCGCCGAGGATATTGAGaagAGCTTCTATGGCCACGAGACTGACTCGCCGGAACTGAAGGGCGCCTCACCATTCTTGTTGCACGGCCAAAAGGTTGCCACGCCCACGCTCAAATTCCACAATCATTTTCCGCCCGACATGCAGACTGACAAGAAGGATCATATATTGGATCAGAGCATGTTAACCAGCACACCGATGTCCGACTTTGGGCCACCGATGAAACGTGGCCGAATGACGCCTCCAACCACGGAGCGTGTCATGTTGTATGTGCGGCAGGAGAACGAGGAGGTCTACACGCCCCTTCATGTGGTGCCGCCCACCACAATTGGCCTGCTCAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatttatcgCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCATTTTACTGCAACGAGGACATTTTCTTGCTGGAGGTGCAACAAATCGAGGATGACCTGTACGATGTCACGCTCACAGAGCTGCCCAATCAGTAG
Protein Sequence
MQDATNSYVISYTDWITESRRGYSLEAEQSTSTSTPSQLHHQHHPHHHDDQQQQQQQHHHYDHHYEAAKDELQHLPLTAAGHLQPHVASELQQLPHPPAPPPPPAAPSAPAPAAPTDATDSISASSSYAVYSYYRNVDAQHEEDHQQQWSNASNAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSATTTGVVSTTTISNQQQHQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQHASDIVTITTAGVGSAGSIVSAVVQQQQQQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNIGAAANGGGSVITQKILRVDATRSEAQISDNTAATTTTTTVTEAAETTTATATSPASSTADLEMYATTGGTQIYLQTSHQSSTGPTQQSSLQAQSPSPGPYITTDSYGMYTATRLPPGPPPTTTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAATQAQPVGGVYEARFTSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQEQSVKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDIEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
-
80% Identity
-