Dper012643.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila persimilis
Gene Symbol
chinmo
Assembly
GCA_003286085.2
Location
NW:709713-717395[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-06 0.0081 15.8 0.5 12 44 508 537 502 537 0.91
2 2 0.00098 1.7 8.4 0.3 17 44 541 565 539 565 0.88

Sequence Information

Coding Sequence
ATGGATCCGCAGCAGCAGTTCTGCCTCAAATGGAACAGTTATTCCTCCAATTTGGCAATAACGTTCTCAAATCTCTTCAAATCGGATCTACTGGCCGATGTTACACTATCCTGCGATGGCGCAGTATTCAAAGCACACAAACTTATATTGGCGGCCTGCTCAAAGAAGTTCGCCGATTTGTTTGAGAACACGCCCACCAATGGTCAGTGCGTCATCATACTGGAGGCCACAACGCCCGATAATATGGCCGCTCTCCTGGAGTTCATGTACAAGGGCGAGGTGCATGTGTCCCAAGAGGCACTCAACAGTTTCCTCAAGTCTGCCGAGAGCCTGCAGGTCAAGGGACTGTCCACAGAGACCGGTCGTCTGGCCGCACAGCAGGCTCAACAGCAACACATGGGCGACAGCTCGCCGCTAGATTCGCCCACAGGGCGACGTAGTATGCGCAACAGCCTCAGTGGTAGCAGCATTATGCCGGGCGGAGGAGCAGGCATCGGGCTGGGAAGTGGTTCCGGGGTAAACTCCATTCCCGGGAGCCTCGGCAATGGTAACGGTCTGAGTCTGGCAGGTGCCCTTAGTGGCATGGCCGCCGGTGGAATGGCAGCTGCCGCCAGTGTGGCGGCCAGCGGATTGAGTGCCTTGGCGGCCAGTGCGAATGCACTGGATCGCTGTGGCAGTGCCGGTGGCAACATTATCGGGGGCACAGCAGCGGGCCATGGACCGTTGAGTGCTGGATCCGGAGCTGGCGGAGCCGGTGGCAATGGAGTGGGTGGCAACAATGGACCCATTAGCCTGGGCAGCGGTGCTGGCGCCGCTCTACATCTGGGCGGGTCGACTGGCAGCTTGAAGCAGGAGTGCGACTCGATGATGCATCCGGGCAGTAGCTCATCCTCCACTATGGGGTACACCCATGTGCCGCCCATGTACAGACCCATCTCCTATGAGCCGCTGCGCAAGCGTGCCCTCCGCAGTCCGTATGCCGAGCAGGAGCTGCGTGGCTCTGTGCTGCGCGACGGCTCCAAGAACTCGTCCTCCGAGTGCCCAAGTCCCATCAACAAGCCACCCTATCATCGTCCATCGTCCAGTGCCTCATCGACGGCACCCACCGAAGCGGATACCATGCACTCGGAAAGAGCCTCGCCACAGTCCAGTCGCTATGAGAACCACAGTCCCAGCACCACAGCTGGCAACGGCAATGCCAACAGTGGGCTGGATCGCATTGTCAAATCAGAGCGTAACAATGGTAGTGCCAATGAGGCAAACGATGATGACCGCGAGCTCATGGATGAGTCAACAGATAATGGAGCCGAAGATCTACGAGTGAAGCTGGAGAACTCAAATTACtccccaccaccgccgccgaaCTCTAACACTTCATCGACAACCCCGAACGCACTGCTGGAGAACCTGAAGAATGCGGATGGAACGCTGTCTGGCAATCTGGCCGCATCGATAGCGCCGGCCGACATGTTGAACGTCTGGAATGCCACCAAGATGAATAACAAGAACAGTGTGAACACAGCGGACGGCAAGAAGCTGAAGTGTCTGTACTGCGACCGCCTTTACGGGTACGAGACGAACCTGCGCGCCCACATCCGTCAGCGTCATCAGGGCATTCGGGTACCCTGTCCGTTCTGCGAACGGACCTTCACCAGAAACAACACGGTGCGGCGGCACATCGCCCGTGAGCACAAGCAGGAGATCGGACTGGCGGCTGGGGCAACCATTGCCCCTGCCCATGTGGCAGCCGCGGCGGCTGCAGCGGCGGCCGCCAATCATTCACCATAGGAAGCGgccgcaacagcagcggcagcagtagTCATGAGCGCCCATAAGGAGGCGGCGAAGCAGCGTAAACGTAAATCACTCAAGATGGCACTCGAGAAGTGCATGCAGCGGCGGGATGCGATGGCCGCAGTACCGGAGGCGGTAGGAGGGGGCAAGGAGGCGGCGGCTTCAGAGATGGAGGCGCCATCGCAGGCGTCGGGGGCACACACAATACACACGAGCGGTTCAGCGGGCACTGAGCCGTTCAGCtacgagcagcagcaacagaagatGCACCACGAGCTGGCTCAGCAGATCAAGGCGGCGATGGCCGTCGAACAGGCCCAGcgggccgaggccgaggccgaaGCAGAGGCCATGGACACCACGATGAACACAACGGTTAATACCACCctcacaaccacaaccaccaACACCAGCCACACCACAACGGGCACCAGCGacggtggcagcggcagcgatgCCGAAGCCGAGGCCAGCGATGGTAGCCTCGAGCGGATGCGGACTCAGACGAACATGGAGGTGGACATGGAGTCCgtgccagagccacagcccgGCTCCGAGCTCGTCGTAGTGGAGCCGAAAATAGAGCCCCTGTCGGACACTGAGGATGAGGACGAACACGATCATCATCTGCACATGTccgagccagagccggagcctgAGCCGGAGATCTACAATCGAATGCCACACACGCCCACCAACCCCCCCCACACTATACCGCCCAACGATACGCCTACATTGACCTCCACGCCCAAGGTCAATGTAGAGCAGTAA
Protein Sequence
MDPQQQFCLKWNSYSSNLAITFSNLFKSDLLADVTLSCDGAVFKAHKLILAACSKKFADLFENTPTNGQCVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQQQHMGDSSPLDSPTGRRSMRNSLSGSSIMPGGGAGIGLGSGSGVNSIPGSLGNGNGLSLAGALSGMAAGGMAAAASVAASGLSALAASANALDRCGSAGGNIIGGTAAGHGPLSAGSGAGGAGGNGVGGNNGPISLGSGAGAALHLGGSTGSLKQECDSMMHPGSSSSSTMGYTHVPPMYRPISYEPLRKRALRSPYAEQELRGSVLRDGSKNSSSECPSPINKPPYHRPSSSASSTAPTEADTMHSERASPQSSRYENHSPSTTAGNGNANSGLDRIVKSERNNGSANEANDDDRELMDESTDNGAEDLRVKLENSNYSPPPPPNSNTSSTTPNALLENLKNADGTLSGNLAASIAPADMLNVWNATKMNNKNSVNTADGKKLKCLYCDRLYGYETNLRAHIRQRHQGIRVPCPFCERTFTRNNTVRRHIAREHKQEIGLAAGATIAPAHVAAAAAAAAAANHSP*EAAATAAAAVVMSAHKEAAKQRKRKSLKMALEKCMQRRDAMAAVPEAVGGGKEAAASEMEAPSQASGAHTIHTSGSAGTEPFSYEQQQQKMHHELAQQIKAAMAVEQAQRAEAEAEAEAMDTTMNTTVNTTLTTTTTNTSHTTTGTSDGGSGSDAEAEASDGSLERMRTQTNMEVDMESVPEPQPGSELVVVEPKIEPLSDTEDEDEHDHHLHMSEPEPEPEPEIYNRMPHTPTNPPHTIPPNDTPTLTSTPKVNVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00483297;
90% Identity
iTF_00575203;
80% Identity
iTF_00575203;