Basic Information

Gene Symbol
Camta1
Assembly
GCA_003286085.2
Location
NW:18342988-18378971[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.4e-48 3.4e-44 148.9 2.1 2 116 424 536 423 536 0.98
2 3 0.45 6.3e+03 -3.5 0.5 63 96 746 780 698 797 0.62
3 3 0.32 4.4e+03 -3.0 0.4 19 45 922 948 903 951 0.71

Sequence Information

Coding Sequence
ATGGAAAATGTGTCCGATGCCAGCTGCAGCGCTTCTTCCCTGAAACTCCAACGGCAGCAAACTCAAATCAAAGCCAAAAATGTCCTAATCAGATCCCAGAGCAGCGGCAAGCTTAGCAGAAATGAGGCTGAatccacaacaacagcaacaacaacagcaacagcgaaaACCACAAAAGCCACAACGAGGACTCTCAAGATCGGGGCCATGCAACAGAAGCAGCTACAGCCACCAAATGGAGTCAACGCTAGCAACATCATCCTGCTGCGGGGCACACGCAACGAGAACGGCCAGATCATTATCCAGAACAAGCAGGACATCCTCACCCTGCTcaacgagcagcagcagcaccaggagAAGGCAGCCCAGGCGGCCCAGGCGTCCACAGCCATCACACTCAATCAACTGCCAACGACCACCACAGTGGCTCGCAAGACGATTGTCCAGAGCTCGGggagcagcaccaccagcaccagctccaCCATATCCATcgtggccagcagcagcagcagcagcagtagcggTGTTGGTGCCAAGGATGCCGCTAGTAACACGATCCTCCTGCAGACGCCCATCAATGCCAGCCAGCTGGAGAGCGTGCTGAAGGCCCAGGAGCGAACGAAACAGGCGAACGGCTCGGCACAGACCAAGCTCATAGAGAGGCCCTTCCTGCTAAAGCACGCCACGCGGAGCCTCAGCTCGGAGAGCAATTGTGACAGCAAATCGCCGTTCGTGCTGCAGACACTCAAGCGACTGGAGAAATCGCAATCCATTCTGGTCATACGCAACTCCACATCAGGCAGCACTTCCTCAATGGCCGTTTCTCCGCCTGTGAATGTTTCGGCCTCCGTATCATCGAATGTTTTAAGCGTGACACGCACTTCAAAGGCTGCCAAGGGCATGGCAGGTGCGCTGCACAAGCTCAAGGCGGCCGCAacggcagcagccgcagcgggagcaggagcaggggcagcaCCATCCGCATCATCGACAGGCACAACCATACTGAGGCTAGGCAAAAGCGCCACCACATTGGCCATTAACGGAGCTGGGGGCAGCAGCAAAATGgaggccgccgccgccgccgccgccgcaacAGCAACCACAACGTCAACAGCAAATAAATTGTCCAACACGGTGACatcggagcagcagcagcagcaacaatcgACAACAACGCAAACGAATGTGCCACTTGGGAACGATGGCGAACCTATCAAACTACCCGACAATTTGGAGAGCCTGCCAAGAGCTGACAGTTTTCCATCACAGCGTCATCGTTGGAATACAAATGAGGAAATTGCTGCGATTCTTATCAGCTTTGACAAGCACTGCGAGTGGCAGTCCAAGGAGGTCCGAACCAGACCCAAGAGCGGATCCCTGCTGCTGTACTCGCGGAAGAAGGTGCGCTATCGCCGCGACGGCTATTGCTGGAAGAAGCGCAAGGATGGCAAGACGACGCGCGAGGATCACATGAAACTGAAAGTACAAGGCACGGAGTGCATCTACGGCTGTTATGTACACTCGGCCATATTGCCCACGTTCCATCGCAGATGTTACTGGCTGTTGCAGAATCCGGACATTGTTTTGGTGCACTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCAGTGATTGCCCCCAGCATCACCCTGTGGGGCGACAAGAAAGAGTGGACCAAGGAGGAGCTGGTCAGCCAGCTGAAGCCGATGCTCTCCACAGTCAACTCCGATGATGACTCCGACTCGGGCAACGACATTGAGATATCGACGGCCGAGACCGTGGAGTCGATTGTGTGCCAGCTGATGGAGAAGCAGCGCTTGTCCCGCCAGGCGGCCCTCGTCAAGCAGCTCGACTGCGGCTGCGGGGACTCGGGCTGTGCCGACGGCAAGACCTGCACGCATCCCGTGATGCGGCGCACGGGCGGCATCATCAAGTCCGCGGTGGCCACATCGGCCTCAGAGAAGCGACTCAACGAGGGGGCCTTCAACGGCGGCACGCCCAATGTGGTGGTGGCCAGCAAGCTATACTCCCGCTGGGCGGAGCGGCCGCGCCAGCGCAACGATGGCATGCACCTGGACAACCCGCACGCACAGTTCCACAATGCCACGCAACAGCTGCCCCAGGAATCGGCCATCAAGTTTCAGATCATTCCTcctcaacagcagcagcaacaacagcaacagcagacgGGACATGGCGATGGCAGCTATCAGCAGCAATATCGTGGTGCCAATCAGATGCTGGCCGCAAGAAGCAATCTGGTgatgcagcaacaacagcaacagcagcagcaatatcaccagcaacagcagcaacactTGAGTCTGCAACGATTCGTGGCCAGTCAGAGCCAAAATTCGGCTCATTTGAATCAGCATCATCATCGCCTGCAAATTGCTAATACAACAATcacggccacagccagagATCCTTCCAcaacagtagcagcagcagcaacagcagcatcggtagcatcggcatcagcagcaggaggaggctcCGTCTTAAATGGAATGGATACGGAACTAATTGAAATCCAAAGCCACATGACTGCAAACAAAATCACTAGCTCCGTCAGcagcaatggcaatggcagcggcagcaattccagtgccagtgccaagcAATTAGCAGCTCAAACGAACAACGAATTAAATGTCGTAAATAATAACGACCccagcaacaataactttaTGTACaatcaacaacagcagcaactgAATACttccagcaacagcaacaacacacagcagcagcagcagcagcaacattaTTATAAATTGCAACAGACATCAGCAACCCCAAACAGTggccaactccaactccaaaatcaaacacaaacacaaacccCAACCCTTGTCCAACCCCCTGTTGAGGCCATGTGTATGTCACCTGAGCAtcgcagcggcagcagcagcagcagcaacaacaatacgGCCTCAACGTCTTCCGCTGTCAACAGTCATAACACCTCCCCCTccacagccatagccacaACCACGTCCATGGCCgcatctatatctatatccaCATCTACGTCCGGCACATCGTCCACCTCGAGTTCCTTACAATCGATTATCGATGGcaatcagcagcaacaaattaCTACGACATCGACGGCAGCAACTTGTGATAATTTAATGAGCGCCAATGCGCTCACTGAGCTGAATGgagggagcagcagcagcagcaacaatcaGGCCACAGATGGCCACAACAAGAGTCAATCGCAATCTCAGCCTCAAACTCTGAGCCAAAATGGTTGTGCAACATTCAGTGCTTCCAGTGATAATAGCAGCCAAATTAGCGCCAGCGACGAGAGTAGCAGCTTTGGGGCCAACAATCAGAACAACAGCATACACAGCATCCACAGCagccaaagcagcagcagtaacagCAGTGAGGACGAGCCCCAGGCGGGCAATGCTGCCGAGACCCTGAGCTTCTTCAACGAAACCCTGGATCTATCCCATGAGGATATTCAACGTACACTGATAGCCAATATGCAGCCGTACAATACGGCTGCAGGCGAAGCAGCCACGACAACGATAGAACCTTTGGCAACAAACGGCAGCCACagtagcagcaacagcaatggcAATCCTCAAGAAGTGGAGAAGAAACCTTCAGTCGGCCAGGAAGTCGAAGCCGAACCTGAGGAGGATGACACAGACGATGTGTTTGCCAACCTGGATGCCTTCGATATGCTCGTGGAGTTCCCCGAGCTGGATCTGGATGATAAGCAGGCCCTGAACAACACGGCCTTGGAGCAGGGCTCCTATCTGGGACAGGCGGCCGCCCAAACGCAGCAGCCCCGCAAGATCCACAACATCTGCGACTTCAGTCCGGAGTGGTCGTACACCGAGGGCGGAGTCAAGGTACTTGTGGCCGGACCCTGGACGAGCAGCAATGGTGCTGGCGCCTACACGGTGCTCTTCGATGCCCAGCCCGTGCCCACGCAGATGGTGCAGGAGGGAGTGCTCCGTTGCTACTGTCCTGCCCACGAGGCGGGCTTTGTGACGCTCCAGGTGGCCTGCGGCGGCTTTCTCGTGTCCAATTCGGTCATGTTCGAGTACAAGCTGTCGCTGCTGGCCGATGCCCCGTTCGATGCGAGCAGCTCCAACGATTGCCTGTACAAATTCACGCTGCTCAATCGCCTCTCGACCATTGATGACAAGTTGCAGCTGAAGACGGAGCAGGAGCCGACGACGGACCACACGGCTCTCTATCTGGAGCCGAACTTTGAGGAGAAGCTGGTCGCGTACTGCCACAGGCTGACGAAGCATGCCTGGAGCATGCCCAGCACAGTGGCCAGCTGGAGCGTGGGCCTGCGGGGCATGACGCTGCTGCATCTGGCCGCCGCCTTGGGCTATGCCAAGCTGGTAGGCGCCATGCTCAATTGGCGGGCGGAGAATCCACATATCATACTCGAAACGGAGCTGGACGCCCTCAGTCAGGATGTGTACGGTTTCACGCCGCTCGCCTGGTCCTGTGTGCGTGGCCATGTGGAGTGTTCCCTGCTGCTCTACAAGTGGAATCACAATGCGCTGAAGATCAAGACGCAGAGCCAGCAAACGGCCCTGGATTTGGCCAACCTGAAGGGGCACAAACATCTCCTGGCCCAGATATTTCGACTGGAGAAGGAGCGCTGCCGCAAGCCGCACTTGCGCGGCGGCCTGGCCAATCTTTCAATGAACCTAGGCGTTGAAACGGAAGCGGAGGAGTCGCAGCCGCAGACCTACAACAGCTTTGACCTGGAGATACTCCAAAGAAAGCACGATGGCGTCTTTCTCAGACCTGGGGCAGTGCATAGCAATCAAAGTCCTcccaacaatggcagcaggtACTCCAAGCGCTCTTCCATAGACAGCGGCATCAACATGGACATACGCAGCAAGTCAGGCAAGTCCCTGGCCAGGCTGCACAGCAACTTTGAGGGGCACGACAGCTATGCATTGGGAGTGGACTCGCCGCTGGATACGCTGACTGGGACCAATTGCCTGCTCTCGCCGCTGCGTAAAATGGATTTCGCCCTGTGCGAGGTATCCACGGGCGAGTCGAGCCCCATACACGACAAAGACATCGATGGCGATGACACCTCGACGAGCGCCACCGATGTGACCATAGGCAATgacctggccctggccctggccgaTGCAGTTGTAGGGGACTCGGATGCCAAAGTGCTGACCCTGGCCGAACACATTATAGCAGCAATGCCAGAGCGCATCAAAAATGAAGCCGATGAAATGATGGTGCTGGGCAGCCCCTTGACTGAGCCACTGACCTCGGAGTCCTCGGCCCTGACAGACAGCTTTATGGATCCCCTGCTGGACTCGCTTCCCAATACGCATTTCGACAGCGACTTCAACTTCGACTTCCACGACCACAGCTATCGGTACCACGATGTGAGCACTCCCTGCTCCAGCCTGAGTCCCGCCAGCTCGGGGCCGCTGCAGTCGCCGGCCAGCTACTCCATACTGGGCACAGATCCGTCTGTCAGCTCGCCCAGTCCGCCGCCGTCGACCAAGCAGCTGACCGAGTTCCTGCACGCCTCCAGCCTGTCGCAGTATCCGTTCGAGGCGGACTTCTCCAAGCTGACGCTGACCGACACGGAGCAGCGGGAGCTGTACGAGGCGGCCAAGTGCATACAGAAGGCCTACCGCTCGTACAAGGGCCGGCAGAAGCTCGAGGAGCAGAACAAAGAGCGCACTGCCGCCATTGTCATCCAGAACTATTACAGGCGGTACAAGCAGTACGCCTATTACAGGCAGATGACCAACGCCGCCCTGGTCATCCAGCATGGCTATCGTTCCTATCGAAAGAACAAACGCTTCAAGAAGAGCGGCCTGGGCCAGGGCATGGCAGGGGGCAGCGATCACGGCAGCGTCAGCAGCAACTCTCAGTGCCTGTCCAGCTTCTACGACCACTACAAGCAggatcagcagcagctgcagcagcagcatgagATGGGCTCGCAGCCGAGCACGCCCAAGGAAACCAGTCCCTCGGGTCCCTTGAAACGAACATACTCGCAGTCCACCCAGAATCAAGCTGCCAGGAAGATCCAACAGTTCATGAGACAATCACGCATCAAactacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATCTTGGCTTGCCTAGAAAATAACAGTTCTGCCCagagcagtggcagcaacaccTATACGAACAGCATCAACAATCTACAATCCAATCAGTGA
Protein Sequence
MENVSDASCSASSLKLQRQQTQIKAKNVLIRSQSSGKLSRNEAESTTTATTTATAKTTKATTRTLKIGAMQQKQLQPPNGVNASNIILLRGTRNENGQIIIQNKQDILTLLNEQQQHQEKAAQAAQASTAITLNQLPTTTTVARKTIVQSSGSSTTSTSSTISIVASSSSSSSSGVGAKDAASNTILLQTPINASQLESVLKAQERTKQANGSAQTKLIERPFLLKHATRSLSSESNCDSKSPFVLQTLKRLEKSQSILVIRNSTSGSTSSMAVSPPVNVSASVSSNVLSVTRTSKAAKGMAGALHKLKAAATAAAAAGAGAGAAPSASSTGTTILRLGKSATTLAINGAGGSSKMEAAAAAAAATATTTSTANKLSNTVTSEQQQQQQSTTTQTNVPLGNDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHCEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDSGCADGKTCTHPVMRRTGGIIKSAVATSASEKRLNEGAFNGGTPNVVVASKLYSRWAERPRQRNDGMHLDNPHAQFHNATQQLPQESAIKFQIIPPQQQQQQQQQQTGHGDGSYQQQYRGANQMLAARSNLVMQQQQQQQQQYHQQQQQHLSLQRFVASQSQNSAHLNQHHHRLQIANTTITATARDPSTTVAAAATAASVASASAAGGGSVLNGMDTELIEIQSHMTANKITSSVSSNGNGSGSNSSASAKQLAAQTNNELNVVNNNDPSNNNFMYNQQQQQLNTSSNSNNTQQQQQQQHYYKLQQTSATPNSGQLQLQNQTQTQTPTLVQPPVEAMCMSPEHRSGSSSSSNNNTASTSSAVNSHNTSPSTAIATTTSMAASISISTSTSGTSSTSSSLQSIIDGNQQQQITTTSTAATCDNLMSANALTELNGGSSSSSNNQATDGHNKSQSQSQPQTLSQNGCATFSASSDNSSQISASDESSSFGANNQNNSIHSIHSSQSSSSNSSEDEPQAGNAAETLSFFNETLDLSHEDIQRTLIANMQPYNTAAGEAATTTIEPLATNGSHSSSNSNGNPQEVEKKPSVGQEVEAEPEEDDTDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQGSYLGQAAAQTQQPRKIHNICDFSPEWSYTEGGVKVLVAGPWTSSNGAGAYTVLFDAQPVPTQMVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDDKLQLKTEQEPTTDHTALYLEPNFEEKLVAYCHRLTKHAWSMPSTVASWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVYGFTPLAWSCVRGHVECSLLLYKWNHNALKIKTQSQQTALDLANLKGHKHLLAQIFRLEKERCRKPHLRGGLANLSMNLGVETEAEESQPQTYNSFDLEILQRKHDGVFLRPGAVHSNQSPPNNGSRYSKRSSIDSGINMDIRSKSGKSLARLHSNFEGHDSYALGVDSPLDTLTGTNCLLSPLRKMDFALCEVSTGESSPIHDKDIDGDDTSTSATDVTIGNDLALALADAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFNFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSLSQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRKNKRFKKSGLGQGMAGGSDHGSVSSNSQCLSSFYDHYKQDQQQLQQQHEMGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEILACLENNSSAQSSGSNTYTNSINNLQSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

80% Identity
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