Basic Information

Insect: Drosophila percnosoma
Gene Symbol: -
Assembly: GCA_035043855.1
Location: JAWNMQ010000071.1:2802278-2803855[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.9e-05 0.0013 19.1 4.3 1 23 215 237 215 237 0.96

2 11 1.3e-05 0.00084 19.7 3.1 1 23 243 265 243 265 0.99

3 11 4e-07 2.6e-05 24.4 0.4 1 23 271 293 271 293 0.98

4 11 5.9e-06 0.00038 20.7 2.6 1 23 299 321 299 321 0.98

5 11 2.6e-07 1.7e-05 25.0 1.3 1 23 327 349 327 349 0.99

6 11 1.5e-05 0.00095 19.5 6.7 1 23 355 377 355 377 0.98

7 11 2.4e-06 0.00016 21.9 1.0 1 23 383 405 383 405 0.99

8 11 1.7e-07 1.1e-05 25.6 2.3 1 23 411 433 411 433 0.98

9 11 1e-05 0.00066 20.0 0.2 1 23 439 461 439 461 0.98

10 11 1.2e-07 7.8e-06 26.0 1.9 1 23 467 489 467 489 0.96

11 11 2.8e-05 0.0018 18.6 0.8 1 23 495 517 495 517 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.9e-05	0.0013	19.1	4.3	1	23	215	237	215	237	0.96
2	11	1.3e-05	0.00084	19.7	3.1	1	23	243	265	243	265	0.99
3	11	4e-07	2.6e-05	24.4	0.4	1	23	271	293	271	293	0.98
4	11	5.9e-06	0.00038	20.7	2.6	1	23	299	321	299	321	0.98
5	11	2.6e-07	1.7e-05	25.0	1.3	1	23	327	349	327	349	0.99
6	11	1.5e-05	0.00095	19.5	6.7	1	23	355	377	355	377	0.98
7	11	2.4e-06	0.00016	21.9	1.0	1	23	383	405	383	405	0.99
8	11	1.7e-07	1.1e-05	25.6	2.3	1	23	411	433	411	433	0.98
9	11	1e-05	0.00066	20.0	0.2	1	23	439	461	439	461	0.98
10	11	1.2e-07	7.8e-06	26.0	1.9	1	23	467	489	467	489	0.96
11	11	2.8e-05	0.0018	18.6	0.8	1	23	495	517	495	517	0.97

Sequence Information

Coding Sequence: ATGGAGCAAATCTGCCGTGCATGTAAAATCAGCTCCTGCAGCGTGGTGAATATATTCACAGAGGGACATCCCAGTCTGGCGGAGATGTTGAGCGAGTGTGCTGCCTGTGAAATCAATCGAAATGATGCACTTCCTCAGCAGCTGTGCCACTCGTGCGTCATCGCTGCGCAAAATGCGTTTCGCTTgaagtgcaactgcaaacagaaagaaacaaaaacagatgTTTGccgcatttgcagcagcaactcaatTACGCTAATTAAGATCAATGcaaagcggcagcagccacGGGACGAACCCAGTCTAGCGGAAATGATAAAAGAGTGCATTAACTGTCGGACAAATCCCAGGGATCAGATATGCCTGACCTGCATTCTGAGCGTTGTAAACGCTTTTCAATTCAAGCGCAGATGTGAGCAGAGTCAGCAGCAgattaaaactgaaattcaaGAAAGTGATTCAGTTGAACATGTGCTGTCCGAGAACAGCTTAGAAATGGAGCAACAAGAATATAGcattaaaatcgaaaatgaaGAAGACTTTGAATGCGAGGAGACTCACATTATGTTGGAGGAGTCGAAGTGTCCACCGACTGTCAATAATCATATCCCAGCAGAGATTGAAGTGGATGCAAAGAAGAAACACGCGTGTGAGAAGTGTGGCAAAAGGTATTCGAACACTTATAACCTTCACGTGCACAGACGCATCCATTCCGGGGAGCGTCCGTTCAAGTGTTGCGAGTGTCCAAAGGATTTCACAAGTCGCAAAGTTCTCAAGGATCACATGCGTATCCACACCGGCGAACGGCCATTTCAGTGCGACCAGTGCCCCAAGGCCTTTGGCCGCAATAGTGCTCTGGTTAAACACATGTTCACGCATACGGGCGAACGGCCCTTCAAGTGCAGCCAATGCCCTAAAGCCTTCTATCAGAGAGGACATTTGAAGATCCATAATCGCATTCATACTGGGGAGCAACCATACCAGTGTCCCCATTGCCCCCGGGCCTTTCCACGCAAGGAGTATCTAGTGACGCACCAGCGACAGCATACGGGCGAGCACCCACACCAGTGTCCCCACTGTCCCAAGCACTTTTCCCGTAGCAAGACCTTGGAGATGCACTTGACCACGCATACGGGTCAGCAGCCCTATCGGTGTCCTCATTGCATCAAAGCGTTCACCGCCAATTCCAATCTACAAATCCATATCCGGAGTCATACGGGTGAACGTCCGCATAAGTGTCCCCACTGTGAGAAGGCATTCAGCCAGAACGTCTTACTCCAGAATCACATACGCATCCACACCGGCGAACGGCCGTTCCAATGTGAGCAATGCCCCAAGGCTTTCCCCAGCAAAGGGGGATTGTACAATCACAGTCGTGTCCACTCCGGCGAACGTCCCTTCCAGTGTCCCAAGTGCCCGAAACGATTTTCGCGCAACGAGAACCTGCGCCATCACATTGGCCTCCATTCCGAGGATCGACCGTACAAGTGCATCCTGTGTCCCAAGGCCTTTACCCGCCGCGAGAGTCTGGCCCGCCACAAGCGGCTTCatgccaaaaaagaaagatcAAAAGATTAG
Protein Sequence: MEQICRACKISSCSVVNIFTEGHPSLAEMLSECAACEINRNDALPQQLCHSCVIAAQNAFRLKCNCKQKETKTDVCRICSSNSITLIKINAKRQQPRDEPSLAEMIKECINCRTNPRDQICLTCILSVVNAFQFKRRCEQSQQQIKTEIQESDSVEHVLSENSLEMEQQEYSIKIENEEDFECEETHIMLEESKCPPTVNNHIPAEIEVDAKKKHACEKCGKRYSNTYNLHVHRRIHSGERPFKCCECPKDFTSRKVLKDHMRIHTGERPFQCDQCPKAFGRNSALVKHMFTHTGERPFKCSQCPKAFYQRGHLKIHNRIHTGEQPYQCPHCPRAFPRKEYLVTHQRQHTGEHPHQCPHCPKHFSRSKTLEMHLTTHTGQQPYRCPHCIKAFTANSNLQIHIRSHTGERPHKCPHCEKAFSQNVLLQNHIRIHTGERPFQCEQCPKAFPSKGGLYNHSRVHSGERPFQCPKCPKRFSRNENLRHHIGLHSEDRPYKCILCPKAFTRRESLARHKRLHAKKERSKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00558881;
90% Identity: iTF_00610044;
80% Identity: -