Basic Information

Insect: Drosophila percnosoma
Gene Symbol: -
Assembly: GCA_035043855.1
Location: JAWNMQ010000076.1:518057-522588[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00053 0.035 14.6 0.9 1 23 214 236 214 236 0.97

2 26 0.00063 0.041 14.3 2.8 2 23 243 264 242 264 0.97

3 26 0.016 1.1 9.9 0.8 2 23 295 316 294 316 0.96

4 26 0.0066 0.43 11.1 2.4 1 23 391 414 391 414 0.94

5 26 0.2 13 6.4 0.6 2 22 424 444 424 444 0.96

6 26 3 2e+02 2.8 0.4 1 20 453 472 453 474 0.91

7 26 5.5 3.6e+02 1.9 0.3 2 23 500 521 499 521 0.93

8 26 0.012 0.79 10.3 0.7 1 23 595 618 595 618 0.96

9 26 0.009 0.59 10.7 0.1 1 22 627 648 627 648 0.95

10 26 0.0032 0.21 12.1 4.3 1 23 657 680 657 680 0.97

11 26 0.00011 0.0069 16.8 0.9 2 23 694 715 693 715 0.97

12 26 2.1e-05 0.0014 19.0 5.4 1 23 721 743 721 743 0.98

13 26 0.14 9.2 6.9 1.3 1 23 880 903 880 903 0.95

14 26 0.029 1.9 9.1 2.2 1 22 910 931 910 931 0.95

15 26 0.58 38 5.0 0.3 1 22 940 961 940 963 0.85

16 26 6e-05 0.0039 17.6 1.6 1 23 987 1009 987 1009 0.97

17 26 0.00016 0.011 16.2 1.1 1 23 1016 1038 1016 1038 0.98

18 26 0.12 8.1 7.1 0.0 2 21 1065 1084 1064 1085 0.94

19 26 0.026 1.7 9.3 4.4 1 23 1130 1153 1130 1153 0.96

20 26 0.0068 0.44 11.1 1.5 1 23 1190 1213 1190 1213 0.96

21 26 0.014 0.94 10.1 3.1 1 23 1240 1263 1240 1263 0.97

22 26 1.4e-05 0.0009 19.6 0.1 2 23 1284 1305 1283 1305 0.95

23 26 4.7e-05 0.0031 17.9 2.9 1 23 1311 1333 1311 1333 0.99

24 26 1.9e-06 0.00012 22.3 4.0 1 23 1339 1361 1339 1361 0.97

25 26 3.9e-07 2.6e-05 24.4 2.9 1 23 1367 1389 1367 1389 0.99

26 26 0.0005 0.033 14.6 0.3 1 22 1395 1416 1395 1419 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00053	0.035	14.6	0.9	1	23	214	236	214	236	0.97
2	26	0.00063	0.041	14.3	2.8	2	23	243	264	242	264	0.97
3	26	0.016	1.1	9.9	0.8	2	23	295	316	294	316	0.96
4	26	0.0066	0.43	11.1	2.4	1	23	391	414	391	414	0.94
5	26	0.2	13	6.4	0.6	2	22	424	444	424	444	0.96
6	26	3	2e+02	2.8	0.4	1	20	453	472	453	474	0.91
7	26	5.5	3.6e+02	1.9	0.3	2	23	500	521	499	521	0.93
8	26	0.012	0.79	10.3	0.7	1	23	595	618	595	618	0.96
9	26	0.009	0.59	10.7	0.1	1	22	627	648	627	648	0.95
10	26	0.0032	0.21	12.1	4.3	1	23	657	680	657	680	0.97
11	26	0.00011	0.0069	16.8	0.9	2	23	694	715	693	715	0.97
12	26	2.1e-05	0.0014	19.0	5.4	1	23	721	743	721	743	0.98
13	26	0.14	9.2	6.9	1.3	1	23	880	903	880	903	0.95
14	26	0.029	1.9	9.1	2.2	1	22	910	931	910	931	0.95
15	26	0.58	38	5.0	0.3	1	22	940	961	940	963	0.85
16	26	6e-05	0.0039	17.6	1.6	1	23	987	1009	987	1009	0.97
17	26	0.00016	0.011	16.2	1.1	1	23	1016	1038	1016	1038	0.98
18	26	0.12	8.1	7.1	0.0	2	21	1065	1084	1064	1085	0.94
19	26	0.026	1.7	9.3	4.4	1	23	1130	1153	1130	1153	0.96
20	26	0.0068	0.44	11.1	1.5	1	23	1190	1213	1190	1213	0.96
21	26	0.014	0.94	10.1	3.1	1	23	1240	1263	1240	1263	0.97
22	26	1.4e-05	0.0009	19.6	0.1	2	23	1284	1305	1283	1305	0.95
23	26	4.7e-05	0.0031	17.9	2.9	1	23	1311	1333	1311	1333	0.99
24	26	1.9e-06	0.00012	22.3	4.0	1	23	1339	1361	1339	1361	0.97
25	26	3.9e-07	2.6e-05	24.4	2.9	1	23	1367	1389	1367	1389	0.99
26	26	0.0005	0.033	14.6	0.3	1	22	1395	1416	1395	1419	0.91

Sequence Information

Coding Sequence: atgttgcCGACGAATGTTTGTCGCACGTGTGCGCTGCAAGATGACAACTTGTTGGCGCTGGCAACGCGTAGTGAGAAATACGCAAAGAAAAGTATCTGCGAAATGCTGCACGAATTAACACAAAACGATCCACTGCTGGAGCATACAGATGATAAGCTACCGCAGCATTTGTGCGGCCAATGCTTGAGCCAGCTGGAAGCAGCTTATGCATTTGTGCTGCAAGCCCGCGAGGCGCaggagcaactgttgctgcagctacGCAAAGCATTGCAGACACAGTGCCTGGACGAAACACCTATCGATATAAGCATAGAACACATCAAAATCGAAACAGACATTGACCTAGATGCGGACACGGCTGACGCAGTTGATGCTGAGTTTGAGGAGGAGCGGGGGAAGCAGGTTGTCTTAAAACGTCAGCTGGAAACTGATAGCGATAGCAGTCTGGATGATGTGATGGACCATGATATTGAGGTCCAAACCCTGCAGCTGCGGCGCAGTGCTCGGCGAGCCAAACGGAGCACAGACAGCGAAAATGAGTCAATCTCCGAGCAGGTGCAGCCGTTGCCTGTTAAACGTGGACGCGGTCGTCCCCGACGTGTTGCCAAGAGAGAGACAACCACCAACGAGGATGGGCGGCATGTGTGCGAGGTGTGCGGCAAGACCTTCTCCTGGTATCGCGACATGCAGCGCCATGCACGCATCCACTTCGAGCAGGCGGGCATTGTGTGCGAGCACTGCGGCAAGAAGTTCCTGCGCAAGGACAAGTACATGACTCATCTGCgatcacacacaaatcaagTGGCCATAGATAGACTGCCACGGAGCAGCGAGTGGCGCTACGCGGAGCGTCTATACAGCTCCGGCAGATTAATGCGTGTGGAGTGCAAACTGTGCGGCATGAGTTGCCAGCGCATTCGGGAGTTGCGCGACCACCTGGCGAGTCATGTTCACATTGAGACATTGTGGAATCTCAGCCTGGACAACGATGTCATTCGGGAACAGTTTGGCAGCCAATCGGATTTGCAGCAAATCAAGGAACAGGTCTGCACGCAAATTGCCAAAGGTCGTGAGCAACTGGAGAATTACGGCGCCGTGGTGAATGCCTACGGTTATGAGCTGTGCCTCAGCGACtcggatgaggaggaggatgaggagatGGCTGGCAAATATCAGTGCCTGCGCTGCAATGTCAACTTTGCACGCAAGCATCAATTCGTGCGTCACACGCTCGAGGAGCACACGGACAGAAGTGAAACCCCTTTGGAACGCTGCAATATCTGTCAAATTGGCTTTGTTTGCGCCAagctgctggagcagcatCAGCGCACGCAGTGCCTCAATCCGCTGAAGCGTTACAGCTGCGAGAATTGTCCTGGCaagtttatttggctgcaGAATCTGCAGCAGCATGCATGCAGCAGGCTGCAACATGATCTGCAGCAGGAACTGCAGCACCGGcatcaggagcagcagcaggcacctCATCGCCAGATCCAGTGTTGCCTGTGCAATGAACGACCCAGCAGCATGGCTGCCCTACGCTCTCATTTACTCGCTCATCGCGATGGACACACGGACATCGATCCGCATCAGCAGTCTGCCTTCTTTCGCACCTATTACCAGGACGACGGCGTCATCAGCCTGTCGGAGATCAGGGCACGCATCGCCAGCGACTTTGAGGCGCAGCTTTATGGAAGATATTTCAATGCGTGTACGGACAGCGGACAGGAACTGGACTTCAACGACTCCGACATGGAGTGGAGCGATGCGCCCGCACTGCATAGCTGTGCCGTGTGTGGCGAGAGTAGAATCCGCCTCAATCAGCTGCTCCAGCATCAGCAGAGCCAGCACATTGAGCTGGCGGACAGACTGCCACACGTCTGCTCAGATTGTGGATTGGGCTATGTGGCCgagtcgctgctgcagcagcatcgtcGTCGCATCTGCGCCAAGCTGCATGCCAAGTACCAGTGTCCACATTGCAGTCAGCGGTTCTATTGGCACTCCAACTACGAGCGGCACATTCAGGTGCAACATCCTGCGGAGAGGCAGCAGGGCCAGGAGAAGAGCAAGCTTCAGTGCAGCGAGTGCGATAAGGTGTTCATCTGGCGTAAGGATTTGACGCGCCACAAGCGCATGCATCAGTCGCAGGTGCAGTTCGAATGCGTCCACTGCGATCGCAAGTTCCATCGCAAGGATGGCCTCAAGTCGCACATGAGGATGCACAGCGAGCTGCCGACTCTTggtgagcagctgcagcgcatGCCGATGGTCTTGAGCCAGCTGTGTCGCCCCAATGGCTGCAAGCAGATCAAGTGCATGATTTGCCTGTCGCAGCACACGAAGATCTCCGATTTGCGAACGCATTTGACTAGCCATCAGTTGAGACTGTGTTTGGCCGAGGAGCGAGGCATCGCAAACATTTGTCGTGTTCTCTATCCGGAGCTGAACACGCCATTGAATCAGCAGGCATTGATCAAGCGTATCCAGCGGGATCTGGGCAATGAACTGGAGCTAGAGAGATTCGTTTCGATAACTAACGAGGCGGGCATCGAACTAAGCCTGGACAGCAGCGAAACGGACACGGATTCGGATTGTGAAGCAGAAACCGAACGGAGCTGCATGGAACGCGGTTACAGCTGTGAACTGTGCCAGGTGCAGGTTATGCGCAAACATCAGCTCTATGCCCACCAGCTGGAGAAGCACACGTGGGACCAGACGACGCACGTCTGCAGCCACTGCCAGGCGAGATTCGTGaatgagcagctgctggacCATCACTATCGCACTCTCTGCCGCAATGCCCAGAGGCGTTTCCTGTGTCGCAACTGTCCGTTGCGCTTTCGATGGCGCGATAATCTCAAGCTGCACAATGTTGTGGCGCATCATGAGCGAGGAAATGTGGAACGGCACTCCAATGTGGACATTCAGTTGCGTATGCTGCCCGTGGTTAGCTATGACTGTGTCGAGTGCAAGCGTagcttcaaaatgcaaaaggatCTCACACGGCACACCTTGATGCATGCCCAGGAGTCGAGCATCTATCGGTGCCGCTGGTGCGCTCGTCGCTTCTACCGGGAGTCGAATCTGCTGCAGCACATCGAGCGCCATGGCATCAGCGCCGACCAGCTGCCCTATGCGGAGGCCCTGCTCAACGCCAGTCGTCATCCGCACGGCCCGAAGTGCATCAAGTGTCGCGTGTGTGAATTATCCTTTGGCAGCATTGCGGCACTGCGCTCGCATCTGCAATCGTCGCCAGTCGGCACTCATCATCCGATTGAGTCCATGGCCAACTATTCGATCACCAATCAGCTGGGTTATGAGCTGCACCTGGACGACTCAGAAACGGATGAGGAAACCAAGCCGGCGGGTACCCCGGCGTATTACACGTGCGACATGTGCCAGCTGCGTTGTGTGCGCAAGTTTGagctgcatcagcatcagcaggcTATGCATCGTCTGGAGCGCATCGCCGATGGCTGCGATCTGTGCATCTTCAAGAGCGTCTCGCCCGATCTGATTGCCTATCATCGGCGTGTGCTGTGCGAGAACACTGAGAAGCAGTTCAAGTGCTCTAAATGCAGCTACAAGTTTATGTGGCAATCGAATCTGGTGCAGCACATCCAACTGCAGCATCCCAGTAGCGAGGAGTCGACTACAAAAACATCAATGCCCAAGGCCGTGCCCGACATTGCCAACGCCGAGTGCCACATCTTCCAATGTGGTCAGTGTCCCAGTAAATACAATCGCAAGGATCGCCTCACCGCCCATGTAAAAAAGTGTCACACAGCTGGCTCAACTGCGTCAACAAAAGCGCCAACGGTGGCCAAGCAGCAGAAGAGTTTCCTGTGCGCATTCTGCGGCAAGGCGGTGAGCTCATCCTCCAATTTAATCATACACATACGTCGGCACACCGGCGAGAAGCCGTTTAAGTGTGATTACTGCGACATGGCTTTTCCGCGCTCCTCCGATCTCCAGTGCCATCGACGCACTCACACCGGCGAACGGCCACACATCTGCACCGTCTGCAAGAAGGGATTTTCTCGCTCCtacaagctgcagcagcacatgcGCACCCACAACGGCGAACGGCCCTACAAGTGCACCTTCTGCGACAAGAGCTTCAAACAGTCCAATGACCTCACACTCCACATCCGGCGCCACACGGGCGAGCGACCTTATCAGTGCAATACGTGCGGCGAGCGATTCATTCAGGGCACAGCGCTCAAGAACCATCGAATGCAGAATGGCCACTATGAGACGGAAGTGGGTCAATCGAAAGTTGACTAA
Protein Sequence: MLPTNVCRTCALQDDNLLALATRSEKYAKKSICEMLHELTQNDPLLEHTDDKLPQHLCGQCLSQLEAAYAFVLQAREAQEQLLLQLRKALQTQCLDETPIDISIEHIKIETDIDLDADTADAVDAEFEEERGKQVVLKRQLETDSDSSLDDVMDHDIEVQTLQLRRSARRAKRSTDSENESISEQVQPLPVKRGRGRPRRVAKRETTTNEDGRHVCEVCGKTFSWYRDMQRHARIHFEQAGIVCEHCGKKFLRKDKYMTHLRSHTNQVAIDRLPRSSEWRYAERLYSSGRLMRVECKLCGMSCQRIRELRDHLASHVHIETLWNLSLDNDVIREQFGSQSDLQQIKEQVCTQIAKGREQLENYGAVVNAYGYELCLSDSDEEEDEEMAGKYQCLRCNVNFARKHQFVRHTLEEHTDRSETPLERCNICQIGFVCAKLLEQHQRTQCLNPLKRYSCENCPGKFIWLQNLQQHACSRLQHDLQQELQHRHQEQQQAPHRQIQCCLCNERPSSMAALRSHLLAHRDGHTDIDPHQQSAFFRTYYQDDGVISLSEIRARIASDFEAQLYGRYFNACTDSGQELDFNDSDMEWSDAPALHSCAVCGESRIRLNQLLQHQQSQHIELADRLPHVCSDCGLGYVAESLLQQHRRRICAKLHAKYQCPHCSQRFYWHSNYERHIQVQHPAERQQGQEKSKLQCSECDKVFIWRKDLTRHKRMHQSQVQFECVHCDRKFHRKDGLKSHMRMHSELPTLGEQLQRMPMVLSQLCRPNGCKQIKCMICLSQHTKISDLRTHLTSHQLRLCLAEERGIANICRVLYPELNTPLNQQALIKRIQRDLGNELELERFVSITNEAGIELSLDSSETDTDSDCEAETERSCMERGYSCELCQVQVMRKHQLYAHQLEKHTWDQTTHVCSHCQARFVNEQLLDHHYRTLCRNAQRRFLCRNCPLRFRWRDNLKLHNVVAHHERGNVERHSNVDIQLRMLPVVSYDCVECKRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRESNLLQHIERHGISADQLPYAEALLNASRHPHGPKCIKCRVCELSFGSIAALRSHLQSSPVGTHHPIESMANYSITNQLGYELHLDDSETDEETKPAGTPAYYTCDMCQLRCVRKFELHQHQQAMHRLERIADGCDLCIFKSVSPDLIAYHRRVLCENTEKQFKCSKCSYKFMWQSNLVQHIQLQHPSSEESTTKTSMPKAVPDIANAECHIFQCGQCPSKYNRKDRLTAHVKKCHTAGSTASTKAPTVAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHICTVCKKGFSRSYKLQQHMRTHNGERPYKCTFCDKSFKQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRMQNGHYETEVGQSKVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00577186;
90% Identity: iTF_00610043;
80% Identity: -