Basic Information

Gene Symbol
-
Assembly
GCA_035043855.1
Location
JAWNMQ010000231.1:3062217-3063229[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-11 3.7e-08 33.7 0.0 15 89 149 214 139 214 0.81
2 2 4.3 6.9e+03 -2.5 0.0 75 84 266 275 245 280 0.49

Sequence Information

Coding Sequence
ATGCACAATCCTCGAGAGCACCTGCGGTGCCGTAGACAAGGATGCACCTACACCACAAACAGGGCATTCAATCTGTCGCGCCATGAGCGCAACCATGTCAAGGGCAAGGTGCCGGTGTCGCAGTACCAGCCGTGTCCACATTGCACTTATGCCGCCGGAACGCTGCACAATTTAATGCGGCACATAGGCAAAAAGCATGCAGAGCTGAGTGGAAAAACGGCAACAAAGCAACAGGCCATAACTAGCCAACTTCAAGCCGAGCAACAAGAATTGCCATCTTCTATGGAGgcggaatcggaatcggagtCGGAGTCAGTGCTTAACCGTGTGGAGGTTATTCCGGAACAGAAGGGCCTAGAGCCAAAATCAGAAACACAGGAATCAGGGGCAGATTCAACGCTTTGGTTTTGGAGCACACCGCAGCAGCTGGAAAGGAATTTTCTGAGGCGTAGTGCGCTGAAGGACGAATGTATAATGCAGGGGCGATCCATCAAGTTGTTCAAATTTTATGCCTTGGTAAATGCGAGAGGAGGTGCCTTAAATGTGGACCAATGggatgatgttgctgcagccCTGGGCCTGCCGTTGGGATCAGGTTGCCAGACCCGAGTAAAGTACATGGAGTTGTTGTACGAATTCGAGAAGAAAGAGGTAAAACGTTCGAAGGAGTGGATGAATGTGAAAGGAGTGCCTTTTTGGTGGGATGATGGCGATTTTGTCACAGATGACATGCATTTAACATCCTGCGATGAGCAGTGGAAGCACGTGAATTCACCATCAATAACTGTTCGCAATGCGATTGTGAAAATGATTTACGACAAGTATTATGCGAAGCACTTAAATAGTAGCAAACCGTTTCAACGGTTTCACATGAAGGATTCCTGGCTGAgggcaacaattttaaattgtaaagcGCTAAAATGTGAACTGCATTCTATGCATTGTTCGGGTTCTTGA
Protein Sequence
MHNPREHLRCRRQGCTYTTNRAFNLSRHERNHVKGKVPVSQYQPCPHCTYAAGTLHNLMRHIGKKHAELSGKTATKQQAITSQLQAEQQELPSSMEAESESESESVLNRVEVIPEQKGLEPKSETQESGADSTLWFWSTPQQLERNFLRRSALKDECIMQGRSIKLFKFYALVNARGGALNVDQWDDVAAALGLPLGSGCQTRVKYMELLYEFEKKEVKRSKEWMNVKGVPFWWDDGDFVTDDMHLTSCDEQWKHVNSPSITVRNAIVKMIYDKYYAKHLNSSKPFQRFHMKDSWLRATILNCKALKCELHSMHCSGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482016;
90% Identity
iTF_00482016;
80% Identity
-