Basic Information

Gene Symbol
osa
Assembly
GCA_035043855.1
Location
JAWNMQ010000231.1:869580-891063[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.7 1.2e+04 -3.3 0.1 16 46 788 821 783 823 0.79
2 2 1.3e-24 2e-21 76.1 0.0 3 89 1034 1120 1032 1120 0.92

Sequence Information

Coding Sequence
atgaatgaaaaaataaaatcgccCTCGGCTGGTGGCGCTGGTGGTGTTGGCGGTGCTGCTAATGCGGCCGCAACGGTTGCagccagcgctgctgctgctggtggtggcgtCACACCGCCCACATCGGGCCCGCCCACGCCAAACAACGGCAACGATCCCaacatacagcaacaacaacagcagcagcaacaacaacaacaacaaggtgGCCCCTTGCCCCATCCCTATGGCGGGCCACCAGCGCCAGGTGCACCAAATGATCCGGCCGCTGCAGCCATGTCCCACTATCACCATttacatcaacagcaacaacaacagcagcagcatccacaagGTCCACCAATGCCGCCACATATGCAGCATCATGGTggaccaccgccgccgccgccacagggaccactgccgctgccgccagAGCATGCGGCCGGTATCAAGGATGAATATGGATCCTCGGGACAtttgccaccaccaccgccgcatGCACATCCCGCCTATGCGCGCTATCACTCCGCCGATCCCAATATGGATCCCTATCGCTATCAGCCACCGCCTGGCGGCAAACCGccgcaccagcaacaacaacagccacaaggTGGTGCACCGGGTGGCTCACCAAATCGACCGccgccacagcaacagcagcaacgctaTATACCAGGACAGCCGCCTCAGGGTCCAACGCCCACATTGAATTCACTGCTGCAATCGTCGAATCCGCCGCCTCTGCCTCAACATCGATACGCCAACAACTACGActcgcagcagcaggcggccaatgcagctgcagcagcggcagcagcagcccaacaacaacaacagcagcaacaacagcagcagcaacaacagcagcatcaacaaaatgcacaacagcagcagcaaccggtCGGACCACCAGGCGGACCACCAATTCCCGGCCATggtccaccgccgccgccacaaCATCAGCCATACGGTGCGCAACAGGGCGGCTGGGCACCACCACCAAGGCCCTACAGTCCACAGCTGGGCTCCGCGTATAGGACACCGCCACCGTCAAATACATCCAGAGGTCAATCACCATATCCGCCAGCTCACAGTCAAAACTCAGGTTCCTATCCAAGTtcgccccaacaacaacagcagcaggcccaacaacaacaacagcaggcggGACAACAGTCCGGTGGAGTTGGCGCACCCGGAGCGCCGGCGCCACCACCCGGccccacacagcaacaacaacagcagcagcagcagcaaaacacacCGCCCACTTCTCAATATTCGCCGTACCCGCAAAGATACCCAACACCACCAGGTCTACCGGCGACCGGGCCCAATCATCGAACTGCCTACACAACGCACCAGTATCCCGAACCAAATCGACCGTGGCCGGGCGGCTCATCGCCAAGTCCTGGTCCTGGCCATCCATTGCCGCCTGCCTCACCGCATCATGCACCGCTACAGCAACCGCCAACGCCGCATGCCGCTGGTGGTGGTCCGCCACCCAGCAGCAGTCCGGGTCATGCACCGAGTCCATCGCCGCAGCCCTCGCAGGCATCACCATCGCCGCATcagGAGCTGATTGGACAGAATAGTAACGATAGTTCAAGTGGCGGAGCACACAGTGGCATGGGCTCTGGTCCGCCAGGCACGCCAAATCCACAGCAAGTGATGAGGCCAACACCCTCGCCAACTGGCTCCTCGGGCTCCAGATCAATGTCTCCTGCagtggCACAAAATCATCCAATCTCGCGACCGGCGAGTAATCAGTCAAGTAGTGGCGGTCCaatgcagcagccaacagtGGTTGGTGGCCCGCCACCGATGCCACCACACGGTCTACCAGGTGGGCCACCATCTCAGCAACaatctcagcagcagcaacaggcatcAAATTCAGCATCATCGGCGAGTAATTCGCCGCAACAGACGCCTCCTCCAGCACCGCCGCCAAATCAAAATGTTAACAATATGGCAACGCCACCACCGCCCCCTCAGGGGGCAACAGGTGGCTATCCCATGCCGCAGCATATGCATGCCGGCTACAAAATGGGCATGCCCGGCCAAAATCCCGGCGCACAAGGATATCCACCACAGCAATATCCTCAAGGCAACTATCCGCCACGCCCTCCGTATCCGTCGGGTGCGTATGGAACGgggccaccaccgccgccgggCAGTCAACCGGCTGGCGGTGCGAACAGCATGCCATCCAGCGCACAAGCTGGCTACCCACGATCCATGCCCAATCACAGCGGTGGCAGTCCACATCCGCAGTATCCGCCATATCAGTGGGTGCCGCAATCCCCCCAACAATCGGTGCCGGGCGGCGGTGCAGCGGGACAAATTGGACCAGCGATGGGCAACCATGTGCAGGGCAAGGGTACACCACCACCGGTGGGGCCACCGCCACCCCAAGGCAGTGGTTCGCCACGCCCACTCAACTATCTGAAACAGCATTTACAACACAAAGGTGGATACGGCGCCAATCCAGCTGGTGGTCCGCAGCCCCAGGGCTATGGCAATGGGCCAACTGGCATGCACCCCTCAATGCCAATGGGCCCGCCCCATCATATGGGTCCGCCGCAGAGTATGGGGCCACCGACCAGCACACCGCCACAGTCAATGCTGGGCGTTCCGCCTGGCAGTGACAGCGGCACGGAGCATATATCCCAGGACAATGGCATCAGTTCGTCGGGCTCGTCACCAGCGACGGGTTTGCATGCGGTGACCGCTGTGGTCACAACTGGACCGGATGGCACCCCATTGGATGATGTTAGTCAACAGAGCACGCTCTCAAATGCATCGGCTGCATCGGGCGAAGATCCACAATGTACTACACCAAAGTCGCGCAAACTTGATCCGTATAGCCAAAGCCATTTAGCTCCACCGAGCACTTCGCCACATCCAGTTGTAATGCATGGAGGCGGCGGTGGTCCAACTGGCGAGGAGTACGAAATGAATTCTCCCCCAAACTGGCCACGCCCAGCTGCAAGTTCGCAGGTGTTCAACAGTCATGTTCCTGTTCAACAAGAACCATTTCGTAGCACGATTACGACCACTAAGAAATCCGATTCGCTGTGCAAACTGTACGAGATGGATGACAATCCGGATAGGCGTGGATGGTTGGACAAGCTGCGGGCTTTTATGGAGGAGCGTCGGACACCGATTACCGCGTGTCCGACCATCTCAAAACAGCCACTCGATTTATATaggttatatatttatgtaaaagaACGTGGCGGATTCGTCGAGGTATGCAAGGTGACCAAGAGCAAGACCTGGAAGGATATTGCCGGTCTGCTGGGGATCGGCGCTAGCAGCAGCGCTGCGTACACCCTGCGCAAGCACTACACCAAGAATCTGTTGGCATTCGAGTGCCACTTTGATCGGGGCGACATCGATCCCCTGCCCATCATTCAGCAGGTGGAGGCGGGCAGCAAGAAAAAGACAACGAAGGCAGCCTCGGTGCCATCACCAGGATCATCGAACTCGCAGGATTCTTTCCCAGCGCCACCGGGCGGCGGTgcaccaaacacaaacatcGATGGCTATACGGGTTATACGGGCGGTGGTGCATATCCACCAACGGCTGGACCACAGCCAGATTATGCTGCAGCGGGACAAATGCCAAGGCCGCCATCGCAAAACAATCCGCAGGCACCGCATCCAGGCACACAAAATCAAgccgctggcgctgctgctgttgttgccggtgATAACATAAATGTGAGCAATCCCTTTGAAGATCCAATTGCTGGCGGTGTGGCcgctggtggtggtgttgctgctgttgcaaatgctgctgccgctgctgctgctgcggcggctgctgctgcaactgcagttggTGGTGCTGCGTCGTCACACGGTGCTCCACCACCGCCCCCACATTCACCGCACACAAACGCGCCACAAACGGCCAatcaacaccaccaacaagtCGGCATTCCAACGCAATTGCCATCGCCGTCACAGCAACCACCGGTGCCaccaccacagcagcaacatggtCCGCCATCGTCGCAGCATGCGCGCCCACCACCAACTGGAGTACCTTATCCACCAGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGGCTCACCGTATCCAACACAACCCGGTGCTTATGGCCAATATGGTTCTGGCGATCAGTATAATGCCGCTGGCCCGCCCGGCCAGCCATTCGGACCAAATCAGGGACAATATCCGCCGCAGAATCGCAATATGTACCCTCCCTATGGGCCCGAAGGGGAAGCTCCTCCCGCTGGTGCTAATCAGTATGGTCCGTATGGAAATCGACCCTATAGTCAAGCGCCGCCCGGCGGGCCACAGCCACCAGCACAAGCCGTTGCGGGCGGACCACCAACTAGTGGAGCGCCAGTAGCACCACCAAATAGTGGTTATGTACCAACCACTCCCAACCAGCAGGATTACTACAGGCCGCCAGATCAAAGTCCTCAGCCGCGACGACATCCTGACTTTATAAAAGATCCACAATCCTATCCCGGATACGCTGCGCGGCCTCAAATTTACGgtGGTTGGCAAGGCGGCAACCAGCAGTATCGTCCTCAATATCCCACAGCGTCAGCGCAACAACCGTGGGGCAATGGCCCGCCACGAGGCACTGCACCACCTGGGGGACCGCATGGTCCGcacggccagcagcagccaggtgTGGCACAGTGGGAACAACATCGTTATCCACCGCAACAGCCTCCACCAccgccgcagcaacaacagccgcccTACCAGCAGGCAGGACAGCCGCCTGGGCAGcccccacagcagcagcaacaacagcagcagcaacagcagcagcagcaacaacagcagcagcagcaacaacagcagcagcagcaacagcagccggcaCCACCACAATGGGCGCAAATCAATGCAGTTCAGGGGCCACCACCGGGAGCGAATATACCGCAGCCGGGCGCATCACTGCGTCCGCCAATGGGCgccgcacaacaacagcagcagcagcaacaacaacagcgcatGCCCAGCGGAGTCCCAGTGATGCCGCCACTGCAGCAGCCGGGTCCGCCGGGTGCTGTGCCGCAAGTGCCACACGGAGGTGTACCGCCAGCAGGTATGCCGCCGGTTGCCGGTGGCATGGTGAAGCCACCATATGCGATGCCACCGCCGTCGCAGGCGGGCGGCACCTCGCCCGGTGTGGTGGGCCCAATGGTAGTGGGCAATCCACCCGGCGCCATGATACCGCAAAAGCAACCGCCGATCGTTGGACCGCAGCAGGGTATGCtgcagcaagtgcaacagcagccgcaacaccAGCCACCACACCAGCAGCTGGCCCCCAATCAGCAGCAGGTGCCACACCAGCAGCTGCCACCCAATCAGCAGCCGAACTATGCACCGGTACAAGTGCCGCCAGGTGCTGCAGGTGCACAATTGGTGAAGAAGGAACTGATCTTTCCGCACGACAGTGTGGAGTCGACAACACCGATGCTCTATCGACGCAAACGCCTGACCAAAGTGGATGTCTGCCCCGTGGATCCGTGGCGAATATTTATGGCGATGCGTTCGGGCCTGCTGACGGAGTGCACCTGGGCATTGGATGTGCTGAATGTGCTGCTGTTTGACGACACCACCGTACAGTTCTTTGGCATATCGAATTTGCCGGGTCTGCTAACGCTACTGCTGGAGCACTTCCAGAAGAATCTCGCCGAAATGTTCGACGAGCGTTGCGAGGATGCCACAAACAATGACGAAGCGGCCAATAACAATGATGACGATGCGGACAGCGGCACCGTCATGTCCCTGCAGATGGATGACAAACTGAatcagcgacagcagcgacaggCGGCGTCGCGCTGTGTGCGCAGCATCTGCAGCTATAATCGGAAGCGACACTATGAGAACATGGATGTGAAGCGGGAGGATTCCGATGATGCGGACGAGGGCATTGATCTGGGGCAGGTGCGCGTTCAGCCAAATCCCGAGGAGCGTTCACTTCTGCTTTCGTTCACGCCCAATTATACGCTGGTCACGCGCAAAGGTGTCCCGGTCCGCATCCAGACTGCCGATCACGACATCTTTGTGGATGAACGCCAGAAGGCCTGGGATATCGATACGAATAAATTGTATGAACAACTGGAGCCGGTGGGCAGTAATGCCTGGACATATGGCTTTACGGAACCGGATCCACTTGATGGCATCATCGATGTGTTTAAATCAGAGATTGTTAACATTCCATTTGCGCGATACGTGcgctcctcctcatcctcctcctcctactcTTCGTACTCAAAGCACAAGGGCGGCAAACCCGAAATCGCACAGAaaaccaccagcaacagcaacaacagcagtagccaCCTGCGGGCAGAGGATATATCGACGGTGCTGATCAAGCAGGAGGacacgagcagcagcaccgaGGACAGCAGCCTACTCCAGCAAACGTACAACAAGAAACGACGACTCGTCAGCAGTagtggtggaggtggtggtgaCACCAAGAAATCCAAACTGGGTGACGATGAATTCGCCCAGCCCACGGTGGAGGTGAAAAAGGAGGCGCCCGATGGTGATAATCTGAACGCGGACAGTGATTGTCGTGCCATCGATATGGAAATTGAAtcgccgcaacagcagcagcgactcaCGAATGGAGTCGCTTCACAGCCGAAGGGATTCGATCCGAAGTCAACTGTGCGCGATGTGGCGCAAGTGTTGCAACGTCGTCGCGATTCTAGCTATGAGGATGAGTGCTATACGCGCGACGAGGCCTCACTGTATCTGGTGAATGATAGCCAGGACTCGTTGGCCCGCCGCTGCATCGCCCTCTCGAATATCTTTCGCAATCTGACCTTTGTGCCCGGCAACGAAACGGTGCTGGCGAAATCGACCAGATTTCTGGCGGTACTCGGACGCCTGCTGCTCCTCAATCACGATCATTTGCGGCGCACGCCCAAGACGCGCAACTATGACAGGGAGGAAGACACAGACTTCACCGACTCGTGCAGCTCGCTGCAGGGCGAGCGGGAATGGTGGTGGGAATACTTGATAACCATCCGCGAGAATATGCTGGTGGCCATGGCGAATATCGCTGGTCACTTGGAGCTGTCACGCTACGATGAATTGATTGCCCGTCCACTCATCGATGGCCTGCTCCATTGGGCGGTCTGTCCCAGTGCGCACGGCCAGGATCCGTTTCCGTCGTGCGGTCCCCATTCGGCGCTGTCACCGCAACGTCTCGCCCTCGAGGCACTGTGCAAGCTGTGCGTGACCGATGCGAATGTAGATTTGGTGATAGCGACGCCACCGTTTTCACGACTGGAGAAATTGTGTGCGGTGCTGACGCGTCACTTGTGCCGCAACGAGGATCAGGTGTTGCGTGAATTCTCCGTCAATTTGCTGCATTATCTGGCCGCGGCAGACAGTGCAATGGCCCGAACGGTGGCCCTACAATCGCCGTGCATCTCGTATCTGGTGGCATTCATTGAGCAGGCGGAGCAAACGGCGCTGGGCGTTGCCAATCAGCATGGCATCAATTATCTGCGCGAGAATCCCGACTCGATGGGCACCAGCCTGGATATGTTACGACGAGCAGCCGGCACCTTGCTTCATTTGGCCAAGCATCCCGACAATCGTTCGCTGTTCatgcaacaggagcagcgtCTGCTTGGCCTGGTCATGTCGCACATCCTGGACCAGCAGGTGGCATTGATTATATCGCGGGTGCTCTATCAAGTGTCTCGTGGCACTGGACCAATGCATTCGGTTGAATACAgattgctgcagcagcgacaacagcaacagcagcaacaacaacaccagcagcagcaacaacaacagcagcagcagcagcaacaacagcggcccagttcggcgacaacaacaataacagctgaGAAGCAGCAAAGTGCGTCCATAAGAACTGAACCCGAACAATCATTGGATGTAAAAGCTTGCAGTGCtaatgcagctgccacaaacgcaacaacaacaacagcagcagcggcagcaacagcaacaaccacaacaacaaacgctgttatcaacgacgacaacagcaatagcagtcAACAATTGCCACCGGCTGCCACATTCAATGATgtaagcaacagcagcacgaacagcagcagttgcggcacagtcagcagcaatcagacaaacagcagcagtatgggcagcagcagtcagacGGCAACGCTAAACAATTTGATAACGCCgagcgaacagcagcaacagcagcagcagcaagtggtTAAAATGTCAACTGCCTCCCCGTCGTCAGCGACGTCATCTTCCGCATTGACAGCGAACACGTTGAGCAACataaatgcagcagcagccacatcgaattcaacacaacaacaacaagcaacagcacaacagcaacaagcggcggcggcggcagcagcagcagcggcggcggtggcacaACAAACGGCTGCACCACCGCCAACAAACGCGAATACAACCGCCGCCGTTGCGTAG
Protein Sequence
MNEKIKSPSAGGAGGVGGAANAAATVAASAAAAGGGVTPPTSGPPTPNNGNDPNIQQQQQQQQQQQQQGGPLPHPYGGPPAPGAPNDPAAAAMSHYHHLHQQQQQQQQHPQGPPMPPHMQHHGGPPPPPPQGPLPLPPEHAAGIKDEYGSSGHLPPPPPHAHPAYARYHSADPNMDPYRYQPPPGGKPPHQQQQQPQGGAPGGSPNRPPPQQQQQRYIPGQPPQGPTPTLNSLLQSSNPPPLPQHRYANNYDSQQQAANAAAAAAAAAQQQQQQQQQQQQQQQHQQNAQQQQQPVGPPGGPPIPGHGPPPPPQHQPYGAQQGGWAPPPRPYSPQLGSAYRTPPPSNTSRGQSPYPPAHSQNSGSYPSSPQQQQQQAQQQQQQAGQQSGGVGAPGAPAPPPGPTQQQQQQQQQQNTPPTSQYSPYPQRYPTPPGLPATGPNHRTAYTTHQYPEPNRPWPGGSSPSPGPGHPLPPASPHHAPLQQPPTPHAAGGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPTVVGGPPPMPPHGLPGGPPSQQQSQQQQQASNSASSASNSPQQTPPPAPPPNQNVNNMATPPPPPQGATGGYPMPQHMHAGYKMGMPGQNPGAQGYPPQQYPQGNYPPRPPYPSGAYGTGPPPPPGSQPAGGANSMPSSAQAGYPRSMPNHSGGSPHPQYPPYQWVPQSPQQSVPGGGAAGQIGPAMGNHVQGKGTPPPVGPPPPQGSGSPRPLNYLKQHLQHKGGYGANPAGGPQPQGYGNGPTGMHPSMPMGPPHHMGPPQSMGPPTSTPPQSMLGVPPGSDSGTEHISQDNGISSSGSSPATGLHAVTAVVTTGPDGTPLDDVSQQSTLSNASAASGEDPQCTTPKSRKLDPYSQSHLAPPSTSPHPVVMHGGGGGPTGEEYEMNSPPNWPRPAASSQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGGGAPNTNIDGYTGYTGGGAYPPTAGPQPDYAAAGQMPRPPSQNNPQAPHPGTQNQAAGAAAVVAGDNINVSNPFEDPIAGGVAAGGGVAAVANAAAAAAAAAAAAATAVGGAASSHGAPPPPPHSPHTNAPQTANQHHQQVGIPTQLPSPSQQPPVPPPQQQHGPPSSQHARPPPTGVPYPPGSSGYPTPVSRTPGSPYPTQPGAYGQYGSGDQYNAAGPPGQPFGPNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQAPPGGPQPPAQAVAGGPPTSGAPVAPPNSGYVPTTPNQQDYYRPPDQSPQPRRHPDFIKDPQSYPGYAARPQIYGGWQGGNQQYRPQYPTASAQQPWGNGPPRGTAPPGGPHGPHGQQQPGVAQWEQHRYPPQQPPPPPQQQQPPYQQAGQPPGQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQPAPPQWAQINAVQGPPPGANIPQPGASLRPPMGAAQQQQQQQQQQRMPSGVPVMPPLQQPGPPGAVPQVPHGGVPPAGMPPVAGGMVKPPYAMPPPSQAGGTSPGVVGPMVVGNPPGAMIPQKQPPIVGPQQGMLQQVQQQPQHQPPHQQLAPNQQQVPHQQLPPNQQPNYAPVQVPPGAAGAQLVKKELIFPHDSVESTTPMLYRRKRLTKVDVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDTTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCEDATNNDEAANNNDDDADSGTVMSLQMDDKLNQRQQRQAASRCVRSICSYNRKRHYENMDVKREDSDDADEGIDLGQVRVQPNPEERSLLLSFTPNYTLVTRKGVPVRIQTADHDIFVDERQKAWDIDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRSSSSSSSYSSYSKHKGGKPEIAQKTTSNSNNSSSHLRAEDISTVLIKQEDTSSSTEDSSLLQQTYNKKRRLVSSSGGGGGDTKKSKLGDDEFAQPTVEVKKEAPDGDNLNADSDCRAIDMEIESPQQQQRLTNGVASQPKGFDPKSTVRDVAQVLQRRRDSSYEDECYTRDEASLYLVNDSQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDTDFTDSCSSLQGEREWWWEYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPHSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPMHSVEYRLLQQRQQQQQQQQHQQQQQQQQQQQQQQRPSSATTTITAEKQQSASIRTEPEQSLDVKACSANAAATNATTTTAAAAATATTTTTNAVINDDNSNSSQQLPPAATFNDVSNSSTNSSSCGTVSSNQTNSSSMGSSSQTATLNNLITPSEQQQQQQQQVVKMSTASPSSATSSSALTANTLSNINAAAATSNSTQQQQATAQQQQAAAAAAAAAAAVAQQTAAPPPTNANTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00500087;
90% Identity
iTF_00516775;
80% Identity
-