Dpen000466.1
Basic Information
- Insect
- Drosophila peninsularis
- Gene Symbol
- ZFY
- Assembly
- GCA_035047485.1
- Location
- JAWNPN010000014.1:2000152-2015691[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.1 74 4.1 0.5 3 21 470 488 468 492 0.91 2 14 0.36 24 5.6 0.1 2 21 514 533 513 536 0.88 3 14 0.18 12 6.6 1.0 1 23 553 576 553 576 0.95 4 14 0.28 19 6.0 0.2 1 21 581 601 581 605 0.90 5 14 0.0033 0.22 12.1 0.1 2 23 667 689 666 689 0.93 6 14 0.49 33 5.2 0.1 1 21 694 714 694 715 0.92 7 14 0.47 31 5.3 0.4 2 23 733 754 732 754 0.91 8 14 0.00012 0.0079 16.6 3.1 2 23 767 787 766 787 0.97 9 14 7.2e-05 0.0048 17.3 1.2 1 23 793 816 793 816 0.97 10 14 0.00059 0.039 14.4 1.0 1 23 835 857 835 857 0.98 11 14 0.0014 0.09 13.3 0.7 1 23 865 889 865 889 0.98 12 14 3.8 2.5e+02 2.4 5.6 1 23 894 918 894 918 0.93 13 14 0.00066 0.044 14.2 2.4 1 23 926 948 926 948 0.99 14 14 0.075 5 7.8 5.7 1 22 954 975 954 979 0.93
Sequence Information
- Coding Sequence
- ATGAAGTCGCAGTCGGATGATCTGGACGATACGCACCTGTGCATCAAGTGCAACGCGACAATCGTGGGTCTGCGGAAATACATAGATCACCGCAAGCAGAATTGCCTGAGCATTGTCGGGAGTGATCGAAAAGAGAAGCGAGCGGTGGTCACTCGCTCCGGCTTGGAGCACAGCTACGATGGCTTCAACTTCACAGAGCCGGAGGCGCCGAGCAGCTACCTGAGCAAGACGACGGCCAGTCATGGCGGCAAGACCTCGAAATCCCTGACGGAGGCGTATGATGAGCTGGGCGCTGATGTGTTCTTCtcctcgctgcagctgcagagcgTCTCGACGGGCGGCAAGACGGTTGCGCGGCCCGAGCGTGGCGGCAAGGTGGGAGAGAGCTGGCATTCGACCAGAAGCTGCTCCGATCCACTGCTGAAGGCGGTGCGGGAGCAGGAGGAGTCCGACTTCAAGACGCTCAACTTTGTGCACTCGCCAGAGGCGAGCGAGGACGAGGAGAATGACGAGGAGCAGGATGACTCTGAGGGCGATGAGGATGAGGCAGATCAGatgcaggagcaggagcaggatcACGAGCAGGAGCCGGAACCCGATGAAGATCCCGATGCCGATCCTGATGATCCGGATTACGAGCCCGAATACGAGGGGCGACGGCACTCGCCGCCGACTGTGCCCGCCACGCACACAGGCGGCAAGTGGAAGCCGGAGCACCGGCCGCAGCTGCGCCACACGCACCTGGAGCGCATCTCGCCCAGCTGGGACGAGCCGCCCGAAGACGCCCACGATCATCCGCCCGCGGAGCACACACGCGGCAAGTGGGTGCCGGGCAGCAAGCAGCTGGAGTACCGCGAAAACATCGACCTGaccaagctgcagcagccggaCGCCAGCTACTGGTGCAACATCTGCTGTCGGCGCCTGAAGACGCGCCTCAACTACGACCAGCATCTGCGCAGTCGCTATCACCACAAGCGCGCGGACGCCGAGTGCCAGCTGGAGCAGGCCCATCTCGAGTCGGCCAATCTGACGGTCAGCACGAACTTCACCCAGCCGGCGCCAGACCGGAAGGAGGCAGCGCCGCgacgtcgtcgccgtcgtcgcacCGCCTTGCTGCGCTGCGACCTGTGCCGCACCAGCATGGCGCGCCACCTCATGGGCAAGCACCTGATCTCGCACTACCACTACCGccgcctgcagcagcaccagcagcagcagccggcccAGCAGCACAGCCAGGCCTCGCTGCACGCCATCCTCGAGCACATGGGCAGCATCGTGCGCCAGGCGCCCTTCCAATGCCTGCCCTGTCGCTTCTACGCCAACACAGAGGCAACTTTTCAGGCCCATTGGCGCTCTGCGGCCCACATCGAGGTGACCCAGCGGCTGGGCGGCAGCTTCTGGTGCGGCTACTGCCAGTTCGAGTGCGACACCAACGACGAGATGTGGCAGCACCTGCTGGGCACTGGGCACCGGGAGGTGCTGCTGGCGATCAATCGCTCGGTGCCCGTCTGCATCGCTCAGCGCCGGCACCTCAGCTGCGGCGTGTGCAAGGCCAGCTTCCTCTACAACGCCGAGCTGCGCAGGCATTTCGCCGCGCAGCACGCTGGGATGGTGGCCACGGGCAGCGCCTCGGATGACTATCAGTGCCGCTTTCGCTGTGGGACTTGTGGCGCCGCCCAAAGGTCGCGCGTGGCACTGCAGCGCCACGAGAAGCACAAGCATCGCGTGGACAGATACTTTTGCTCGGTGTGTCAGCTGGAGTTCGCGACGGCGCTGTCCGCGCGCCGGCACCGCAGCCTCCTGCTGCACAAGCGGCACGCGAACCGGCGTCCGAGCGCGGTCAAGTGCAGCAGCTCCGAGCAGTCGGCGCCGGCGCCGGAGAGTGAAATTGAGCACATGCTGCGCGAGGTGCTGGAGGAGCCGCAGACCGAGCAGCCCGACCAGGCCGAGCAGCCGACAACGAGCGCCAAGGCAGCGCAGCGGGCGGCTAGCCAGTGCGCCAACTGCTCGGAGAGCTTTGAGACATCCGAGGCCCTAATCCAGCACCGCAGCGAGGTGCATCCCATCGATAATCACGCCTGCCTCAGCTGTGGCGGCAGCTTCCAGTCCGCCCAGGCGCTCGGGCGGCACACGCGCAGCTGCCAGCCCATTGCCTCGATTTCTTCGTCTGCCTTGGCGGCTTCGGAATGGAACTGCGACCAGTGCGGCTTCAACACCCCATACGAATCGGATCTGCTCTATCATCGCTTCTTCCACGTGCGCGGCGCCTCCATTGGCAAGGACGAGCTGCTCCAATGCCCGCGCTGCCCCAAGAAGTTCCGCAAGCACTCGCTGCGCGCCCACCTGCGCAACCACACGAACGAGCGCATCTTCGAGTGCGCCGAGTGCCTGGCCAAGTTCGCCAGGCGGCACAACCTCAAGAACCACATGGAGACCATGCACAGCCAGCGCAAGAAGACCAAGGCCAAGCCGACGCCGGCCAAGGAAAAGCAGACGTTCCAATGCGGCACCTGCGGCAAAATATTGGCCAAGAAACACTCACTGCAAGTGCACGAACTGAAACATGACGAAAAGACGAAGAGTCGCTTCCGCTGCCCCAACAAGGACTGCTCCTATGCGGGCCGCACACGCGAAGGCCTCAAGACCCACCTCAAAACCCACTCCAAGGGCAAGCACAAGTGCTCGCACGAGAGCTGCGCCTACGTGGGCAAGAGTGAGCTGCACTTGAAGAGGCACCTCAAGACGCATCCAGTGGGGACTGACAGCGAATTCAAGTGCGAGCGCTGCGAGTTCAAGGCACGAATCAAGAGCGACCTGAAGCGTCACATGCGCCGACACACCGGAGAGAAGCCCCACAGATGCCCTCACTGCGAGTTCCAGTGCAGCAGCTTCGACAATATGCGCAAACACATCCTAAAGACGGGCAAACATCCAGGCAAGTTCATCTACAACTGCTCGAGCTGTACCACATTCAAGACCAACAACCTGAAGAAGTATCAAAACCATTTAATCACGCACGAGTCGGCAGCTCCATGTGACTAG
- Protein Sequence
- MKSQSDDLDDTHLCIKCNATIVGLRKYIDHRKQNCLSIVGSDRKEKRAVVTRSGLEHSYDGFNFTEPEAPSSYLSKTTASHGGKTSKSLTEAYDELGADVFFSSLQLQSVSTGGKTVARPERGGKVGESWHSTRSCSDPLLKAVREQEESDFKTLNFVHSPEASEDEENDEEQDDSEGDEDEADQMQEQEQDHEQEPEPDEDPDADPDDPDYEPEYEGRRHSPPTVPATHTGGKWKPEHRPQLRHTHLERISPSWDEPPEDAHDHPPAEHTRGKWVPGSKQLEYRENIDLTKLQQPDASYWCNICCRRLKTRLNYDQHLRSRYHHKRADAECQLEQAHLESANLTVSTNFTQPAPDRKEAAPRRRRRRRTALLRCDLCRTSMARHLMGKHLISHYHYRRLQQHQQQQPAQQHSQASLHAILEHMGSIVRQAPFQCLPCRFYANTEATFQAHWRSAAHIEVTQRLGGSFWCGYCQFECDTNDEMWQHLLGTGHREVLLAINRSVPVCIAQRRHLSCGVCKASFLYNAELRRHFAAQHAGMVATGSASDDYQCRFRCGTCGAAQRSRVALQRHEKHKHRVDRYFCSVCQLEFATALSARRHRSLLLHKRHANRRPSAVKCSSSEQSAPAPESEIEHMLREVLEEPQTEQPDQAEQPTTSAKAAQRAASQCANCSESFETSEALIQHRSEVHPIDNHACLSCGGSFQSAQALGRHTRSCQPIASISSSALAASEWNCDQCGFNTPYESDLLYHRFFHVRGASIGKDELLQCPRCPKKFRKHSLRAHLRNHTNERIFECAECLAKFARRHNLKNHMETMHSQRKKTKAKPTPAKEKQTFQCGTCGKILAKKHSLQVHELKHDEKTKSRFRCPNKDCSYAGRTREGLKTHLKTHSKGKHKCSHESCAYVGKSELHLKRHLKTHPVGTDSEFKCERCEFKARIKSDLKRHMRRHTGEKPHRCPHCEFQCSSFDNMRKHILKTGKHPGKFIYNCSSCTTFKTNNLKKYQNHLITHESAAPCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -