Basic Information

Insect: Drosophila peninsularis
Gene Symbol: salm
Assembly: GCA_035047485.1
Location: JAWNPN010000057.1:3791708-3801743[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.8e-06 0.00032 21.0 0.9 1 23 464 486 464 486 0.98

2 7 9.5e-06 0.00063 20.0 2.1 1 23 492 514 492 514 0.98

3 7 0.016 1.1 9.9 1.5 2 23 899 920 898 920 0.98

4 7 6.8e-08 4.5e-06 26.8 0.5 1 23 926 948 926 948 0.98

5 7 0.00021 0.014 15.8 2.3 1 23 958 980 958 980 0.98

6 7 0.028 1.8 9.1 2.9 2 23 1380 1401 1379 1401 0.97

7 7 2.7e-08 1.8e-06 28.1 1.3 1 23 1407 1429 1407 1429 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.8e-06	0.00032	21.0	0.9	1	23	464	486	464	486	0.98
2	7	9.5e-06	0.00063	20.0	2.1	1	23	492	514	492	514	0.98
3	7	0.016	1.1	9.9	1.5	2	23	899	920	898	920	0.98
4	7	6.8e-08	4.5e-06	26.8	0.5	1	23	926	948	926	948	0.98
5	7	0.00021	0.014	15.8	2.3	1	23	958	980	958	980	0.98
6	7	0.028	1.8	9.1	2.9	2	23	1380	1401	1379	1401	0.97
7	7	2.7e-08	1.8e-06	28.1	1.3	1	23	1407	1429	1407	1429	0.99

Sequence Information

Coding Sequence: ATGCGTAGTGACTTCAAGGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGTACCGTTAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCCAGAAGCGCAGAGAAAGACATAGCAAGTGATCAGGAGGATAATGGCGCCTGCTCGCCGCTGACCACGGCGACGGCTAGCGCCAGTCCGGCGGGCAACAGCCCGTGCCCCAGCCGCAGCAgtccgcagcagcagagcgaggACGAGCTGGAGGGGGAGACTGCGGGGCCAGCAGCAGACAAGGGCACTGAGCTCGCCGCAGAGCAGCCGCTAGCAAGTAATGCGTACGAGACAATCGCAGATCATaatcataacaacaacaacaacaacaacaaagtggtCATGACCAAGCCGCCGGTGGAGCACGAGGTCGAGCCGAACGCGAACTCGAGCGCTTCGATGCCGAACTCGCCCACAGCAGCGAGCTCCtcgctggagcaggagcaggcagGCCCCGCAAAGGAGCTGGAGGCGGACGTGGAGATGCAGGGGGCAGAGGGCGCGGCAGAGGGCAAGATCTCGAGCACGCCGCCAGCGAGCAATGCGCTGGATGCAGCGGCCGCAGCTCAGCAGTTCGGCGCCACGCCCGTCACCCTGGAGGCCATACAGAACATGCAGATGGCCATAGCGCAGTTTGCGGCCAAGACGATTGCGAATGGGGCCTCCGGCACGGACAACGAGGCGGCCATGAAGCAGCTGGCCTTCCTGCAGCAGACGCTCTTcaacctgcagcagcagcagctcttccAGATCCAGCTgatccagcagctgcagtcgcagctgGCGCTGAACCAGGTCAAGCAGAACGAGGAGGAGGCCGACGAGGAGCTCGAGCCGGAGGAGCGCGAGGATGGCGAGACGGACACctacgaggaggaggagcgcaTCGCCGACATGGAGCTGCGCCAGAAGGCCGAGGCACGCATGGCCGAGTCCAAGGCCCGTCAGCACCTCATAAATGCGGGCGTGCCGCTGCGTGAGCGATCCCGGTCCGCCTCACCGGCTGCCTCGTCCCTCTCAACGTCGTCGTCCCTGAAGCGCCGACGCACGGAGGACGGCACAGCCAAGGCGGCCAGCCAGAGTGCCAAGCTGGAGAGTCCACAGGATGCGCTCTCGAAGCTCAAGGAGATGGAGAACATGCCACTGCCCTTCGGCTCGGACTTGGCCTCGAGCATCATTACCAACCACGACGACCTACCCGAGCCCAACTCCTTGGACTTGCTGCAGAAGCGCACCCAGGAGGTGCTCGACTCCGCCTCCCAGGGCATCCTGGCCAACAACATGGCCGACGACTTCGCCTTCGGCGACAAGTCCGGCGAGGGCAAGGGCCGCAACGAGCCCTTCTTCAAGCACCGCTGCAGATACTGCGGCAAGGTCTTCGGCTCCGACTCCGCTCTGCAGATCCACATTCGCTCCCACACGGGCGAGCGGCCCTTCAAGTGCAACGTGTGCGGCAGCCGCTTCACCACCAAGGGCAATCTGAAGGTCCACTTTCAGCGGCATGCGCAGAAGTTTCCGCACGTGCCcatgaatgccacgcccataccGGAGCACATGGACAAGTTCCATCCGCCGCTGCTGGACCAGATGTCGCCCGACAGCTCGCCCACGCAGTCGCCGGCGCCGGCGCCTGCTCTGCCGCCGAGCTCAACGTCCGCTCTGACCCAGATGCAGTCGTCGATGTCCTTCGCCTCGAGTCCGGCCTTCCCCGGACTGCAGGGCATGTACCGCCCGCCCATGGAGCTGCTCAAGTCCCTGGGCGCAgccgctggcagcgctgcggGCCTGCCGCACCCCTTCTTCCCTCAGATGCCAGGCCTGGGCGCGGCGCTGaagcacacacagcagcagcagcagcagagccaggaGATGCCCACAGACCTGCGCAAGTCTTCGGGTCCCAGCTCGCCGCATGGGGAGGAGGAGGACAACATCCAAGTGGCGAACTTGCCCGTGAAGACGGAGCTGATGGACGAGGAGAAGGCGGAGAgtgcagctgagcagcaggcggcggctGACTGCGCCGAGtcggagccagagccagagccagagccgctgccgctggagGTGCGGATAAAGGAGGAGCGGCTGGATGATGAGCCGGAGcatgagcaggagcagcagcggctgtgcCAGTCGGAGGCGCTCGGCCGTCGCTCGCCGACGCCTTCCGCCTCGGCTGTGGTGCACAGCCCGCCGCCCATGCATCGGCACCACCACCATCACATACACCCCCATTCCAGCGCCATGCCGGGTTACCCGCCCGTAGTGCAGCCCATCCAGCCGCCGGCCATCCTGCACGCCCACTGCTCGCCCAGCTCGCAGGGGCATCTCGATCAGCTGCCGACGCCCGGACAGCTGCCGCCGACCATGGCCCAGCGGGAGGACTTCTTCGCGGAGCGCTTCCCACTGAACTTCACCACCAAGACGCTCTCCCCGGAGCATCACTCGCCCATACGCTCGCCcgccggccacgcccacgcccatatTCCGCGCTCGCCCTTCTTCAACCCCATCAAGCACGAGATGGCCGCCCTGCTGCCCCGCCCGCACAGCAACGACAACTCCTGGGAGAACTTCATCGAGGTCTCGAATACCTCCGAAACCATGAAGCTCAAGGAGCTGATGAAGAACAAGAAGATCACGGACCCCAACCAGTGCGTGGTCTGCGACCGAGTGCTCTCCTGCAAGAGCGCCCTCCAAATGCACTATCGCACCCACACGGGCGAGCGGCCCTTCAAGTGCCGGATCTGCGGCCGCGCCTTCACCACGAAGGGCAACCTGAAGACGCACATGGCCGTGCACAAGATCCGGCCGCCCATGCGCAACTTCCATCAGTGCCCCGTCTGCCACAAGAAGTACTCCAACGCGCTCGTCCTGCAGCAGCACATCCGGCTGCACACGGGCGAGCCCACGGACCTGACGCCCGAGCAGATCCAGGCGGCTGAGATCCGCGATCCGCCGCCCTCAATGATGCCGGGCCACTTCATGAATCCGTTCGCAGCCGCCGCCTTCCACTTCGGAGCCATGCCAGGCGGCGGTCCGGGTGGCCCGCACGGCGCAGCCGGCATGCCCGGTGGCCCACACAATGGCGCCTTGGGCTCGGAATCGTCGCAGGGCGATCTGGACGACAACATGGactgcggcgacggcgacgacttCGACGATGCCTCCTCGGAGCACTTGTCCAACAGCAATGATCCCACGGCCGACGAGCGCCCGCGCTCCGGGGACGACTTCAAGTCGCTGCTCTTCGAGCAGAAGCTGCGCATCGACCCGACGGGCGTCGTGAACATCAACAGCCATCAGCGCCCGCACTCGGCCGCCAGCAATGCCAACTCCATGGGCTCCGCTTCGGCCTCGCCCTCGGCGCCGACCAGCCCGAGCTCGCAGCCCAAGCCCAGCTGCTCGCCTGCTCGGTCCATCTCGGAGACCTCGCAGGGCGCGCTGGATCTGACGCCACGCGCTGTGCCGCCCCCGGCCGCCTCCTCCAGCTCGCgctcgccgctgccgccgcccgcTGAGCGCAAGGAGAAGACCATCAGCCCGCTGAGCCAGCAGCCGCCGGTGCGCAGCCCGAATGGACCCGGAGCGCTGCTCTCCTCGCAGCTGCCGCCTTCGGTGGGCATGGACTGCCTGCCGCCCGGCCTGCAGCatcacctgcagcagcagcatcagcatctcATGCAGCAACAGGCCGCTGtggccgccgcagccgccgcccagcaccaccaccaccagatGCAGCAACATGCGGCTGCGCTGCACCAGCACCAGGAGCACCTGCGTCGCGAGGCCCAGGAGGTGCAGCAGAAAgcggctgcagccgccgccgccgccgcagccgcagccgcggCCCAGCGCCAGGCATCGCCGCAGCCCGCAGCCCGCTCCGGCGAGTCGTCCGTCAGCGGCCCACCCGCCCCACCGAACCCGCTCATCACGGCGCGGCCGCCCTTCGGCATGTTCCCCAATCTGCCAATCTTCCCGCCCGCCACCACGCAGAACATGTGCAACGCCATGAACCAGATCGCGCAGTCCGTGATGCCGGCCGCCCCGTTCAACCCGCTGGCGCTCAGCGGCGTGCGCGGCAGCACCACGTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATCCACTACAGGAGCCACACCAAGGAGCGGCCCTTCAAGTGCAACATCTGCGATCGCGGCTTCACAACTAAGGGCAACCTCAAGCAGCATATGCTGACGCACAAGATCCGCGACATGGAGCAGGAGACCTTCAGAAATCGTGCAGTAAAGTATATGAACGAGTGGAGCGACGAGCGCGAATAG
Protein Sequence: MRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDIASDQEDNGACSPLTTATASASPAGNSPCPSRSSPQQQSEDELEGETAGPAADKGTELAAEQPLASNAYETIADHNHNNNNNNNKVVMTKPPVEHEVEPNANSSASMPNSPTAASSSLEQEQAGPAKELEADVEMQGAEGAAEGKISSTPPASNALDAAAAAQQFGATPVTLEAIQNMQMAIAQFAAKTIANGASGTDNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKQNEEEADEELEPEEREDGETDTYEEEERIADMELRQKAEARMAESKARQHLINAGVPLRERSRSASPAASSLSTSSSLKRRRTEDGTAKAASQSAKLESPQDALSKLKEMENMPLPFGSDLASSIITNHDDLPEPNSLDLLQKRTQEVLDSASQGILANNMADDFAFGDKSGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTQSPAPAPALPPSSTSALTQMQSSMSFASSPAFPGLQGMYRPPMELLKSLGAAAGSAAGLPHPFFPQMPGLGAALKHTQQQQQQSQEMPTDLRKSSGPSSPHGEEEDNIQVANLPVKTELMDEEKAESAAEQQAAADCAESEPEPEPEPLPLEVRIKEERLDDEPEHEQEQQRLCQSEALGRRSPTPSASAVVHSPPPMHRHHHHHIHPHSSAMPGYPPVVQPIQPPAILHAHCSPSSQGHLDQLPTPGQLPPTMAQREDFFAERFPLNFTTKTLSPEHHSPIRSPAGHAHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGGPHGAAGMPGGPHNGALGSESSQGDLDDNMDCGDGDDFDDASSEHLSNSNDPTADERPRSGDDFKSLLFEQKLRIDPTGVVNINSHQRPHSAASNANSMGSASASPSAPTSPSSQPKPSCSPARSISETSQGALDLTPRAVPPPAASSSSRSPLPPPAERKEKTISPLSQQPPVRSPNGPGALLSSQLPPSVGMDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEHLRREAQEVQQKAAAAAAAAAAAAAAQRQASPQPAARSGESSVSGPPAPPNPLITARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDERE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00534052;
90% Identity: iTF_00586872;
80% Identity: -