Basic Information

Insect: Drosophila peninsularis
Gene Symbol: -
Assembly: GCA_035047485.1
Location: JAWNPN010000035.1:7635686-7640164[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.18 12 6.6 6.3 2 23 339 361 338 361 0.96

2 17 0.0072 0.48 11.0 1.6 2 23 404 425 403 425 0.94

3 17 1.2 78 4.0 0.6 2 17 436 451 435 457 0.81

4 17 0.97 64 4.3 3.0 1 19 493 511 493 515 0.88

5 17 0.00044 0.029 14.8 0.3 1 23 523 546 523 546 0.96

6 17 0.00042 0.028 14.9 0.3 2 23 551 572 550 572 0.97

7 17 0.51 34 5.1 0.0 1 20 580 599 580 600 0.93

8 17 9.1e-05 0.0061 16.9 0.4 1 22 620 641 620 644 0.91

9 17 0.029 1.9 9.1 0.5 1 21 649 669 649 670 0.93

10 17 0.0098 0.65 10.6 0.3 1 23 689 714 689 714 0.96

11 17 0.033 2.2 8.9 2.3 2 23 729 751 728 751 0.93

12 17 0.00066 0.044 14.2 0.1 2 23 757 779 756 779 0.92

13 17 0.0096 0.64 10.6 0.2 2 23 783 805 782 805 0.96

14 17 2.5e-05 0.0016 18.7 2.0 1 23 811 833 811 833 0.98

15 17 0.0095 0.63 10.6 0.6 1 23 837 860 837 860 0.94

16 17 4.3e-06 0.00028 21.1 0.8 1 23 866 889 866 889 0.97

17 17 0.00054 0.036 14.5 0.3 1 23 893 921 893 921 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.18	12	6.6	6.3	2	23	339	361	338	361	0.96
2	17	0.0072	0.48	11.0	1.6	2	23	404	425	403	425	0.94
3	17	1.2	78	4.0	0.6	2	17	436	451	435	457	0.81
4	17	0.97	64	4.3	3.0	1	19	493	511	493	515	0.88
5	17	0.00044	0.029	14.8	0.3	1	23	523	546	523	546	0.96
6	17	0.00042	0.028	14.9	0.3	2	23	551	572	550	572	0.97
7	17	0.51	34	5.1	0.0	1	20	580	599	580	600	0.93
8	17	9.1e-05	0.0061	16.9	0.4	1	22	620	641	620	644	0.91
9	17	0.029	1.9	9.1	0.5	1	21	649	669	649	670	0.93
10	17	0.0098	0.65	10.6	0.3	1	23	689	714	689	714	0.96
11	17	0.033	2.2	8.9	2.3	2	23	729	751	728	751	0.93
12	17	0.00066	0.044	14.2	0.1	2	23	757	779	756	779	0.92
13	17	0.0096	0.64	10.6	0.2	2	23	783	805	782	805	0.96
14	17	2.5e-05	0.0016	18.7	2.0	1	23	811	833	811	833	0.98
15	17	0.0095	0.63	10.6	0.6	1	23	837	860	837	860	0.94
16	17	4.3e-06	0.00028	21.1	0.8	1	23	866	889	866	889	0.97
17	17	0.00054	0.036	14.5	0.3	1	23	893	921	893	921	0.89

Sequence Information

Coding Sequence: ATGTCGGAAAACTCGAAAACAAGCAACGAAAATGGGCTTAGCTGCCTGCATTGCAGTGTGTACAATTCAAAACAACAATTTCATGAAATATTCGATGAAGTGGGCGTCGAAATTGAATTCGCCGAACTCTTGGCCAAATATTTCCAACTCGTGGTCAAACCCGACGCGCAAAAGTCTCAAGTGCTGTGCCAAGAATGCGTAAATACGCTAATTCGCTTCTTTGACATAGACGAACTGCAGCGTGAGCAGGATGCCGCCAATGCAGCCAAAAAGGCGGccaagcagcaggagcaggagcagccaaGTGCCGCTAAGAAGCCTGAAAATTCCCCGAAAAAAGCGGCGCCAACGTCTGTGCCAAAGGCAAAGGGCGCCACAGTTGCCGCCAAAACTTTGCCAGCGCCCGTTAAATTAGTTAAGTCAACAACTGTCGCTGCAGCTACAACTGCACCCAAAGCCGCTCCAGAAAGTCTAGCATTACGCATTACCAGAGCACGTGCCGCTACGCCTAAAAGTATTCCTGTTAAAGCCAAGGAGATAGTTAAAACAAATACTAAAGTCAAGGCGAAAACTGGCTCAGCAGATCAGGAGCAGTTCAGCGAACTCATACGCGACATTTTGGATGATGAGCAGGCGCCGGCGGATGATAAATTTGCCGAGGCCGCAGCGACCGTGCGGAAGCTGGAAAAGcaatcaaacaaaaaacagcagGATGAAGAACAGCTGGAGGAAGACGATAACAATGATGACCTGGAGTTTCTGCTTCAGCCAGAAGACAACTCCTCCGACGTGGATGTGCGTCATTTCAAAGTGGAACGTAAAGTCAAACGAGCTGCGCGATCCCAatcccagtcccagtcgcaCAATGAAACCCAAAGCGAGGATGAATCATTTAAAGTGGAGCCTTTCAATTTTGTCTTAATCAAAGAATCTGACAACATTGGCGATCTGCATGAATATCTCTCGACTGTGGTCAAGACCTGCTTTGAGACTCTGCAATTCGACTGGGCCACTGTGTGTCGTCATTGCTCGATGAAATGCAGCAAATATGACACTCTGCTCAATCACATGCAGAAACGCCATCAGCTGGCGGGCGAGCGCTTCAGTTGTCCCATTGAAGGCTGCACGGCGGAGCTCAAGGGCCGCAAGTTTTTGGCCATGCATCTGGTAGTGCTGCATGCACCTGTGGCAGAAATACCCATTTATGGCAAGTGTCCCGAGTGCAATATGACCTTCTCCAACATATTGCAGTACAACAAACACTCCTGCGCGCACGTCATTAAGAAGCGTCGCGGCATACGCCTATACTGTGAGATGTGCGGTCTTGAGTTTCCCTCCTGGAAGCGCTTTAACTTCCACAATCAATTCCATTTGGAGTGCCACAGACCGCGCGCTTGCTTCGTTTGCAATTATGCAGACAACAACATCGATGAGCTCTTCCATCATTTGCACTATGCACATGAACCAGAGGGCACACACTTCTGTGATCTCTGCGATCGCAACTTTCGCGATGCCGCCGTCTTTATGGAGCACAACAAATGCCATTCGAATGTCAGCAGCACCACCTACAGCTGCTCTGAATGCAGCGCCAACTTCGAGACACGCAGTCGGCTCAATGTGCATCTGCGCGCCGTTCATGGCAGCGTCATTAGCTGTGAGCTGTGCAGTCGCGAGTTTGCCACAGAGGCGACCTACAATCTGCACATGAAGACGCATCTAATCATAGAGCGCGAGGTGCACGTGTGCAACGGCTGCGGCCTGCTCAGTGAGAGCAACGAGAAGCTGATGGCTCACGTTGAGGCTGAGGACTCAGCTTGCTTCGGCATGGAGACCTATGCGGAGCTGTTACGCAATGCTTATGTGTGTGAATATTGTTCCTCGAATTTTAAGCAGAAGAGCGATTTGCGTGCTCATCGCGAGTCGGGCGCGCACAAGGATGGCTGCTTCATATGCCAGCCGTGTGGCAAGGAATTTGCCGACATGAAACTCTATCGCCATCATCTGCGCAActttcagcagcagcgctcAGATGTGGCGCATCGCAAGCTAGAGATATGTCTGTACTACATGTGTGATATTGAGaATTGCACAGAGGCTTATATTAACTGGAACTCGTTGTACACACACAAGCGCCGCTTGCACGATGCCGCCAAGCAAGAGCCGCAAGCTAAAGAAAACGAATGGATCTGCCAGTTCTGTCAGAAGAAATGCAGATCCAAAATGTCGCTATCGGTGCATGTTGCGCGCAGTCATAATAATAATAATCTGATTTGTCCGATTTGCAAGGCTTCGTATAAGGATAGTGACGCCTTGGCTAAACATCACGCCTATTGGCATGAGCCCATGGAGTGTCCTCTGTGCttgaaaatagttaaaaatcgTCGCAATTATGATACGCACATGAATGTGGTGCATTCGAATAAAAAGCGCTACTCGTGCAGTGTGTGCTCAAAGGGATTCTATCACAAAAGCGAAATGGAGGCGCATCAGCGGCTGCATAGTCAATCGTATAGCTGCGAGCAGTGCAGCTTCATCACACGGAACAAGAAGTCGCTGTCGGTGCATATACTGGGCCAGCACTTCAAGCGCTTCGCCTTCGAGTGCAAGGAGTGCGACAAGCGTTTCGGACGTCGCCAGGGCCTCTCGAATCACATGCAGCGCGCGCATGGCTCCAAGTACACGTGTCGCGATCTGTACGACGGTGGCTGCAGCAAATCCTTCAGCTCGACGGCGCAGCTGAATATGCATGTGCGCAAGGCGCACGATGGCAGCGTTTATATAGAGGATGATACGACTAAGGGCGAGGacgatgaggaggaggaggaggaggtggtGGAGgacgaggagcaggagcaagaGCAGGAGCGGGAGGAACAAGTGAACAGCGATGCCCCCTCGACATCGAAGAAGCGCAGCATACGCATCAATGCGAATACACAAATCGAGTTTGTGGGCGACTCAGCGGCTGTGGCCGAGGATCAGGCGCCTGAGATAGACGAGGAAGCGAAGCGGCCGACCAAGAAGCcaaagttaaattaa
Protein Sequence: MSENSKTSNENGLSCLHCSVYNSKQQFHEIFDEVGVEIEFAELLAKYFQLVVKPDAQKSQVLCQECVNTLIRFFDIDELQREQDAANAAKKAAKQQEQEQPSAAKKPENSPKKAAPTSVPKAKGATVAAKTLPAPVKLVKSTTVAAATTAPKAAPESLALRITRARAATPKSIPVKAKEIVKTNTKVKAKTGSADQEQFSELIRDILDDEQAPADDKFAEAAATVRKLEKQSNKKQQDEEQLEEDDNNDDLEFLLQPEDNSSDVDVRHFKVERKVKRAARSQSQSQSHNETQSEDESFKVEPFNFVLIKESDNIGDLHEYLSTVVKTCFETLQFDWATVCRHCSMKCSKYDTLLNHMQKRHQLAGERFSCPIEGCTAELKGRKFLAMHLVVLHAPVAEIPIYGKCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLECHRPRACFVCNYADNNIDELFHHLHYAHEPEGTHFCDLCDRNFRDAAVFMEHNKCHSNVSSTTYSCSECSANFETRSRLNVHLRAVHGSVISCELCSREFATEATYNLHMKTHLIIEREVHVCNGCGLLSESNEKLMAHVEAEDSACFGMETYAELLRNAYVCEYCSSNFKQKSDLRAHRESGAHKDGCFICQPCGKEFADMKLYRHHLRNFQQQRSDVAHRKLEICLYYMCDIENCTEAYINWNSLYTHKRRLHDAAKQEPQAKENEWICQFCQKKCRSKMSLSVHVARSHNNNNLICPICKASYKDSDALAKHHAYWHEPMECPLCLKIVKNRRNYDTHMNVVHSNKKRYSCSVCSKGFYHKSEMEAHQRLHSQSYSCEQCSFITRNKKSLSVHILGQHFKRFAFECKECDKRFGRRQGLSNHMQRAHGSKYTCRDLYDGGCSKSFSSTAQLNMHVRKAHDGSVYIEDDTTKGEDDEEEEEEVVEDEEQEQEQEREEQVNSDAPSTSKKRSIRINANTQIEFVGDSAAVAEDQAPEIDEEAKRPTKKPKLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00512900;
90% Identity: -
80% Identity: -