Dpen012619.1
Basic Information
- Insect
- Drosophila peninsularis
- Gene Symbol
- -
- Assembly
- GCA_035047485.1
- Location
- JAWNPN010000079.1:1607862-1612492[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.0013 0.084 13.3 1.4 1 23 219 241 219 241 0.97 2 26 0.013 0.88 10.1 2.1 1 23 247 269 247 269 0.98 3 26 0.02 1.4 9.6 0.3 2 23 301 322 301 322 0.96 4 26 0.00068 0.045 14.2 1.6 1 23 399 422 399 422 0.94 5 26 5.7 3.8e+02 1.9 4.0 2 23 433 456 432 456 0.93 6 26 2.7 1.8e+02 2.9 0.2 1 20 462 481 462 483 0.89 7 26 0.2 14 6.4 1.1 2 23 493 514 493 514 0.97 8 26 0.025 1.6 9.3 1.2 1 23 594 617 594 617 0.95 9 26 0.00031 0.021 15.3 0.1 1 22 626 647 626 647 0.95 10 26 9.1 6.1e+02 1.2 2.5 1 23 656 679 656 679 0.94 11 26 0.0011 0.072 13.6 0.2 2 23 711 732 710 732 0.97 12 26 1.4e-05 0.00094 19.5 5.7 1 23 740 762 740 762 0.99 13 26 0.031 2.1 9.0 2.7 1 23 910 933 910 933 0.92 14 26 9 6e+02 1.2 1.4 3 22 942 961 941 961 0.91 15 26 6.4 4.2e+02 1.7 1.6 1 23 970 993 970 993 0.86 16 26 1.2e-05 0.00079 19.7 1.8 1 23 1018 1040 1018 1040 0.97 17 26 0.00045 0.03 14.7 0.7 1 23 1047 1069 1047 1069 0.98 18 26 0.027 1.8 9.2 0.0 2 21 1096 1115 1095 1116 0.94 19 26 0.015 1 10.0 3.6 1 23 1161 1184 1161 1184 0.96 20 26 0.0061 0.41 11.2 0.5 1 23 1221 1244 1221 1244 0.96 21 26 0.014 0.96 10.0 3.1 1 23 1272 1295 1272 1295 0.97 22 26 1.4e-05 0.00092 19.5 0.1 2 23 1323 1344 1322 1344 0.95 23 26 4.7e-05 0.0031 17.9 2.9 1 23 1350 1372 1350 1372 0.99 24 26 2.3e-06 0.00015 22.0 2.0 1 23 1378 1400 1378 1400 0.97 25 26 5.9e-08 3.9e-06 27.0 2.4 1 23 1406 1428 1406 1428 0.99 26 26 0.00018 0.012 16.0 0.5 1 23 1434 1456 1434 1456 0.97
Sequence Information
- Coding Sequence
- ATGCTGCCGACAGATATTTGCCGTACATGCACGTTACATGATGATAGCTTGCTACCGCTTGCGACCCGCACTGATAAGTATGCAAATAAAAGCTTAAATGACATGCTGCTCGAGTTGACACAACATGATCCCCTGCAGGAGCATGCAGATGACAGTCTGCCGCAGCAGTTGTGTATTGGTTGTCTGCACAAGTTGGAGGCTGCGTATGGCTTTGTGTTGCAGGCGCGCCAGGCTCAAgaacaattgttgctgcagctccgCAAGGGCTTGCAAACACAGTGCTTGGATGAGATGCCTATAGACATGAACCTGCAGCACATCAAAACCGAAACGATCGTTGACTTGCAGCTAACTGGCAAAGCCAAGAGTGAAGTAGACGAGGCGGACGCTGAAGAAAGGGTGATGACTGCAGAGTCAATTCCAGCCCTGAAGTGTCAGCCAGAAAGCGATAGTGAGAGTAATCAGACAGCTGATGATGACCAGGATGTGGACTTTAAGCCCATGCAGTTGCGGCGCAGCTCACGTAAAGGAAAAGCCGACTCAAACAGCGAAATGGCTGCAACATCTGCCTGTGCCAGTCCGCTGTCTATCAAACGACGTCGTGGCCGCCCAGCACGTCTTCTCAAAAAGGAAACTGTCAACGAAGAAGGACGGCATGTGTGCGAGGTTTGTGGAAAGACCTTTTCATGGTATCGCGATATGCAGCGTCACTCGCGCATACACTTTGAGCAAGCGACCTTCGTGTGTGACAGTTGCGGCAAGAGTTTCCTGCGCAAAGACAAATACATGTTCCATATGCGTTCGCACGAAAAGCGTTCTGCGAAGTGTCAGGCCATGGAACTGGGCAGCGAATGGCGCTTCGCTGAACGCCTCTACAGCTCCGGGCGGCTCAAGCGTGCTGAATGCAAGCTGTGCGGCTTAAAGTACCAGCGTATAAGGGAGCTGCGAGAGCATTTGGCGAGCCATGAGAGCATTGAGACTTTGTCAAAACTGAGTTTGGAGAGTGATGTGATCAGGGAACAGTTTGGCAAAGAGAAGCAGCAGCTAGACTTGGCGCTAATCAAACAGAAGCTGTGTGCAGACATTGCTAAAGGACGTGGTCAGCTGGACAAGTACTGCGCTGTGGTCAACGCATACGGTTATGAGCTGTGCCTTAGCGACTCGGACGAAGAGATAGCTGACCGGTCCCCTGAATACCAGTGCCTGTCTTGCAACATCACCTTCACGCGCAAATATCGCCTTATGCGGCACACCTTGGAGGAGCACACACAGGCGGAAAGAGCAGTGTCTTGGCAACGCTGTGAGGTTTGCCAAATTGGCTTTGTGTGCTCTAATATGTTTGAGCAGCATCAACGCACGCAGTGCCACAACAAACTGAAGCGTTATAACTGTCCCAACTGCCCTGGCAAATTTATTTGGCTGCAGAACCTGGAGCAGCATGCGTGCTCGCAACGTATgaagcaacggcaacaaaggCAGTGTTGTCTATGTGACATCCAATTAAACAGCATGTTCGAATTACGCGCCCATTTGCTGACCCATCAAGATGGACGTACTGGCATACATCCCGAGCAGCAGGCAACTTTCTTTCGCACCTACTATCCCAATGGCCTTGACTGCAGCTTATCTGAGCTGAGCGCACGTATTGCCGCCGATTTTAAGGCGGAGGATTATGGGCGATACTTTAATGCTAGAACGAGAAATGGCGAGGAGCTCGATTTCTTTGCCTCTGACTCTGAGTTGAGTGATGTGGACCAGCTGAGTTCTGGCGGTACGCTACACATATGTTCCCTGTGTGGCGAGACGAAAACGCGCCTGAGTCAATTGCTAGAGCATCAGCAAAGCCAGCATAGTGAGGTGCAAGGAAAACTTCCATATGCCTGTGAAGATTGCGATTTGAGTTTTGTAGCGAATTCGCTGCTCCAACAGCATCGCCGACGCGTCTGTGCTAAGCAGTTTGCCAAGTACGAATGCCAGCAATGCTGTCAGCGCTTTTATTGGCTTTCTAATTACGAGCTGCACATGCTTCTCCAACACGGGACTCCAGGCGAGATGCAGACGGATGATGCTGatgagcaggagctgcagtcAAGGATGAGAAGTAAGCGCCAGTCTACAGGCTCCAAACTACAGTGCGGCGAGTGCGAAAAGGTATTTATCTGGCCCAAGGATCTGACGCGTCACAAGCGCTTGCACCAGCCACAGGCTTTGGCACAATACCAATGCTTGCACTGTGACCGCAAATTTCATCGCAAGGATGGGCTGAAGTCGCACATGCGCGTGCATGGCGAACAGCAAGGAGATGCGTCGATTGCCAGTGACCAAGCTTCCTCCATGCTGCAGCGCACGCCCGTGGTGCTGACCCAACTGTGTCGACCTAATGGCTGCAAGCAAATTCAATGCATGATATGCCTTTCGCAGCATACCAAAATATCAGATCTGCGCACGCATTTGCTAAATCACCAGTATTCCGTGAAGTTTACAGAGGAGCGTGGCCAGCCGGAAAGCATATCAGTCATTTCACGTTCTCTATACCCAGAACTAGCTGAACcattggagcagcagcaactcatCGAACGCATTCAAAGCGATGTGGCAAAACGCGTCGAGCTGGAAAGATTCATATCCATTACAAACGAGGCGGGCATTGAGCTGAGCCTGGACAGCAGCGAAACGGAAACTGACTCGGACTCTGCCGAGGTAGTCAGGAGCAGCTGCGATCGACTCTATAGCTGTGAGCTGTGCCATTTGAAGGTATCGCGTAAGCATCAGCTCTACGCCcatgagctggagcagcactCATGGCAGCAGGCAACGCGTATTTGCAACTGCTGCCAGGCGAGGTTCATAAATGGGCAGCTACTAGAACATCACTATCGGACGCTCTGTCGTAACGTGCACCGAAGATTCCTTTGCCGTAAGTGTCCGCTACGGTTCCACTGGCGCGAGAATTTGAAGCTGCATTCAGACGTGTCACACAACGAAGCCAGGGGTGAACAGTCGAACCTGGGCGTCAAGTTGAACGAGTCGCACTTGATGCCCAGCGTTAGTTATGACTGCTCCGAATGCAATCGTAgctttaaaatgcaaaaggaTCTCACCAGGCACACTCTGATGCATGCCCAGGAGTCCAGCATTTATCGGTGTCGCTGGTGCGCCCGACGTTTCTATCGCGAGGCAAATTTACTGCAGCACATCGAGCGTCACGGCATCACCGCCGAACAGCTGCCCTATGCTGAGGCCCTGCTGAATGCCAGTCGACACCCGCATGGTCAGAAGAGTATCCAGTGCAAGGTGTGTAACGTGACCTACCCCACCATTGCTGCGCTGCGCAGCCATCTTCAATCAGCGCCAGCAGGCACGCATCATGAGTTTGGGTCGTTGCTCAACTACTCCATTACCAATCAGTTGGGATACGAGTTGCATCTGGAAGACTCAGAAACGGACGAGGAGACTAAGCCGCCGGGCACACCCGCGCACTACACCTGCGGCATATGCCAACTGCGCTGCGTGCGCAAGTTTGagctgcatcagcatcagcaagcGATGCATCGACTGGAACGCATCACCGAGGGCTGTGATGTCTGCATCTTTAAGAGTGTCTCAGCAGATCTCATCGCCTATCATCGGCGCATCTTGTGCAATAATACGGATAAACACTTCAAATGCTCCAAGTGTGGCTACAAGTTTATGTGGGAAGCCAATCTGTTGCAGCATATCCAGTTGCAGCATCCAAGCAGCGAAGGCAGTGAAGCGCAGCAGGATGGAAATTCTTTGTCCGTACAGAGAGTACCCAGTGTAGAGTGCCAAATCTTTCAGTGCGGCCAATGCCCTAGTAAATATAATCGCAAGGACCGCCTCACAGCACATGTAAAGAAATGCCATCTAGCGGAAGCAAGTGGTACCGCTTCCGCGGGAGCGAAGCTTATGAAAACTTCCACCAGCGCGAAGCAGCAGAAAAGTTTTCTCTGTGCTTTCTGCGGCAAGGCGGTTAGTTCCTCCTCCAATCTGATTATACACATACGTCGTCATACTGGAGAGAAGCCATTCAAGTGTGACTACTGCGACATGGCTTTTCCACGTTCCTCCGATCTGCAGTGCCATCGACGCACCCACACTGGCGAGCGGCCGCACGTTTGCACAGTGTGCCAGAAGGGCTTTGCCCGATCGTAcaaactgcagcagcacatgCGCATCCACAATGGCGAACGGCCGTATAAGTGTACCTATTGTGACAAGAGTTTTACTCAGTCGAATGATCTGACACTTCACATACGACGGCACACCGGCGAGCGTCCCTATCAGTGCAACACGTGCGGCGAACGCTTCATTCAGGGCACAGCTCTGAAGAATCATCGCCTCCAACATGGACATCACGATACGGAAGTGGACCAGGTCAAAGATAACTAA
- Protein Sequence
- MLPTDICRTCTLHDDSLLPLATRTDKYANKSLNDMLLELTQHDPLQEHADDSLPQQLCIGCLHKLEAAYGFVLQARQAQEQLLLQLRKGLQTQCLDEMPIDMNLQHIKTETIVDLQLTGKAKSEVDEADAEERVMTAESIPALKCQPESDSESNQTADDDQDVDFKPMQLRRSSRKGKADSNSEMAATSACASPLSIKRRRGRPARLLKKETVNEEGRHVCEVCGKTFSWYRDMQRHSRIHFEQATFVCDSCGKSFLRKDKYMFHMRSHEKRSAKCQAMELGSEWRFAERLYSSGRLKRAECKLCGLKYQRIRELREHLASHESIETLSKLSLESDVIREQFGKEKQQLDLALIKQKLCADIAKGRGQLDKYCAVVNAYGYELCLSDSDEEIADRSPEYQCLSCNITFTRKYRLMRHTLEEHTQAERAVSWQRCEVCQIGFVCSNMFEQHQRTQCHNKLKRYNCPNCPGKFIWLQNLEQHACSQRMKQRQQRQCCLCDIQLNSMFELRAHLLTHQDGRTGIHPEQQATFFRTYYPNGLDCSLSELSARIAADFKAEDYGRYFNARTRNGEELDFFASDSELSDVDQLSSGGTLHICSLCGETKTRLSQLLEHQQSQHSEVQGKLPYACEDCDLSFVANSLLQQHRRRVCAKQFAKYECQQCCQRFYWLSNYELHMLLQHGTPGEMQTDDADEQELQSRMRSKRQSTGSKLQCGECEKVFIWPKDLTRHKRLHQPQALAQYQCLHCDRKFHRKDGLKSHMRVHGEQQGDASIASDQASSMLQRTPVVLTQLCRPNGCKQIQCMICLSQHTKISDLRTHLLNHQYSVKFTEERGQPESISVISRSLYPELAEPLEQQQLIERIQSDVAKRVELERFISITNEAGIELSLDSSETETDSDSAEVVRSSCDRLYSCELCHLKVSRKHQLYAHELEQHSWQQATRICNCCQARFINGQLLEHHYRTLCRNVHRRFLCRKCPLRFHWRENLKLHSDVSHNEARGEQSNLGVKLNESHLMPSVSYDCSECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYREANLLQHIERHGITAEQLPYAEALLNASRHPHGQKSIQCKVCNVTYPTIAALRSHLQSAPAGTHHEFGSLLNYSITNQLGYELHLEDSETDEETKPPGTPAHYTCGICQLRCVRKFELHQHQQAMHRLERITEGCDVCIFKSVSADLIAYHRRILCNNTDKHFKCSKCGYKFMWEANLLQHIQLQHPSSEGSEAQQDGNSLSVQRVPSVECQIFQCGQCPSKYNRKDRLTAHVKKCHLAEASGTASAGAKLMKTSTSAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRLQHGHHDTEVDQVKDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00509945;
- 90% Identity
- -
- 80% Identity
- -