Dpeg003366.1
Basic Information
- Insect
- Drosophila pegasa
- Gene Symbol
- L
- Assembly
- GCA_035046225.1
- Location
- JAWNOD010000076.1:14259173-14270943[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1e-05 0.00065 19.9 2.9 1 23 169 191 169 191 0.98 2 17 0.36 22 5.6 6.2 1 23 197 219 197 219 0.97 3 17 1.7e-07 1.1e-05 25.5 3.2 1 23 225 247 225 247 0.99 4 17 1.3e-05 0.00079 19.6 0.4 1 23 253 275 253 275 0.99 5 17 0.014 0.87 10.0 0.2 2 23 351 375 350 375 0.93 6 17 0.00027 0.017 15.5 0.2 2 23 397 419 396 419 0.96 7 17 0.064 3.9 8.0 0.7 1 23 485 507 485 507 0.97 8 17 0.019 1.2 9.6 0.0 2 23 515 536 514 536 0.91 9 17 0.031 1.9 9.0 1.7 3 23 547 569 544 569 0.86 10 17 4.6 2.8e+02 2.2 1.0 2 23 605 627 604 627 0.94 11 17 0.0026 0.16 12.4 1.1 1 23 675 698 675 698 0.97 12 17 0.0066 0.41 11.1 1.6 2 23 873 895 872 895 0.96 13 17 0.12 7.3 7.2 0.1 1 23 901 923 901 923 0.92 14 17 0.57 35 5.0 0.4 2 23 931 952 930 952 0.93 15 17 0.32 20 5.8 1.3 1 23 1049 1071 1049 1071 0.94 16 17 0.041 2.5 8.6 0.0 1 23 1081 1103 1081 1103 0.94 17 17 0.0084 0.52 10.8 1.2 1 23 1108 1130 1108 1130 0.97
Sequence Information
- Coding Sequence
- ATGATGGCCTTAAAGATGTTGTATCGCGGTCCCAGTTCGCGCTTagagaatttaattgaaaagatACAAGCGACCAAGGAGATAACAAATAACGATATGTACAGCACGCACACCTCGTCCAGCTACTCGCCCAGCATCTCCGATGGCACTTTGACGCCCAactcacagcagcaacagcagcagcagcagtcgcagcagtcgcagtcgcagtcgcagcagttgcagccTGGCGAGGAGCCCGGCGAGGAGGCCAAGGCGAATGGCGATGCGGCGGCACAGCCgacggagctggagcaggagctgagCAAGCCGAAGCGACCGGCACActtgcatcatcatcatcatcatcactaTCATCATCAGCAGGCGCTGAAGATAGCGAACAAGCTGCGCAAAATCAATAAGGACGCCAAGCTGGCTGcaggacaaggacaaggacatGGCACAGCCGCCAAGTTTGATAAGCTGACAGGGGAGGGGCTTAAAAGTCGCGGCGACGGCTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACTCGGCTACTTGAAGCATCACGTGCAGAGCCATGCCGAGCATTTGCCCTTCAAGTGCGAGTACTGCGCAAAGCTGTTCAAGCACAAGCGCTCGAGAGATCGCCACAAGAAGCTGCATACCAATGAGAGGAACTACAAGTGTCCGCACTGCGAGGCGGCTTTCTCCAGAAGCGATCACTTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCCTTCCAGTGCAGCATGTGCAATCGCGGCTACAACACGGCCGCCGCCCTCACCTCGCACATGCAGAAGCACAAGAAGAACGCGGCGATCCTCGCCGCCGGCGGCAATCCCAACGCGCTCAACTACAGCCCCCGCTCGACGGGCTCCGCCTCCATCTCGAGCAATGGGAGCCTGCACAAGCGGCGCTATGCCCTGGCGCTCGCCTCCGACAGCAGCCCCAGTCGCCTGGAGTTTCCCAAGCGAGCGCGCGTCACGCCCACGGCGAATGCAACGATAGCGACGCCCacgccgctgctgcgctgcagctACTGCCCCAAGGCGACGGAGTTCAGCAGCCTGGAGCAGCTCAACGCGCACCTGCAGAGCacgcacgagcagcagcagcagacgcagcagcagaaggatgCGGATGGGCAGACGAATGGCTTCCAGCTGAGCTGCGAGTACTGCACGATGAGATTCGCTAACATCGCGGCGCTGTTCCAGCACATGCGGGTGACGCACCTGGACCGCCTGAGCAGCCCCAACTCCTACTACGAGCACCTGAGCCGCCTGGGCTCGCCGCAGTCGAAGCTGGCGCCGCCCGAGAAGCCCGAGCAGGAGCTGCCCACCGACCTGAGCAGCAACAAGCGACGTCcgctgacgccgccgccgccggcgacgtcgcagccagcgctgccgcctccgccgcccgGCATCTTCTTCTGCAACCAGTGCAACGCCGGCCTGCCCGACTTCGAGAGCTTCCGGAATCATCTGAAGAGCCACATCGCCGAGGGCATGCAGCTGATCTGTCCGCATTGCGGCCTGAGCCTGCCCGAGCAGGGCGAGTTCGAGCGCCACGTGGTCGCCCACTTCCTGATCAGCAGCTCCGAGttcaactgctgcagcaccagCTGTGGCAAGTCCTACGCCAAGGCGGAGGAGCTGCATCAGCATCTGCTGGCCGAGCACGTCCAGACCATGCTCAAGTGCGTGCTCTGCTCGGAGCTCTGCGAGAATCGCATGGCCATGCAGCTCCACCTGGCCTGCGCGCACAGCCAGGAGACgaagctgctgcgctgcagcgcctgcCTGGAGCTCTTCCGCAGCGACGCCGACTTCCACGTGCACGTGAAGACGCGCCACCAGCTGCAGGGCAGCCAGGGCAGCAGCCACGCCCTCGGCAATCCGCCCGCTCCGGCCAATCCGCTGCAGTGCATGTTCTGCCGCGCCGTCTGCTCCTCGGAGCTGGAGATGCACTTCCATCTGGCGGCGCATGCGCGCCAGTTCCGCTGTCCCAGCTGCCCGGAGACCTTCCACGTCGAGTTCCTGCTGGACAGGCACATGCAGAGCCAGCACGGCGGCGCCAAGGACACCAAGGAGTCGCCCAGCATGGGCAGCCTCTACGTGAATGCCCTGCTGCCGCctctagctgcagctgccgcagccgctgccgccgccaatgccaacgccaacaacaacaacaacaacagcaacctgCACATAGACTATAACGTCGCCTTCAAGGGTCTGTTCGGAGGCAACAATGGCAATCCGTCGAGCAAGTTCTACAACAGCCCGCTGCAGGTGGACACCAAGCAGGCTCCGCATCCGGCGCTCATGTACGGCCTGAGCCAGCGCTATCTGATGGAGATGTACGCCGCCAAGGCCAACTCGCCAGCGAATGCCGGCGCAGCGGAGCTGCCCACGCCGCAGCCGGTGCAATCCTCGACAGCAGccggcaataacaacaacaacaacaacagcagcggcagcaacggctaCAGCTGCGGCATGTGCGAGCGGCAGGATCTGCGCAGCGAGGCGGAGCTGCACTCGCACCGCAAGCTGGCGCACAACCTCAAGACGGGCGTGAGCCTGCGCTGCGCCTACTGCTCGGGCAACTACAAGAGCCGagcggagctggagcagcacatGAAGAGCTGCCACAACTCGAGTGGGAAGCACAAGTGTTTGATCTGCGACGAGATCTTCCCCTCGCCGGCCATCCTCGCGGAGCACAAGCTGCAGCACTCGAAGGTGGGTCAGTCCGGCAAGTGCGCCCACtgcggccagcagctggagcacgTGGCCGCCTTTCGCGCCCACCTGGGCGAGCACGGCAACGACGGCAACCTGCCCATGGCCTGCATCTGCTGCCGCCAGACGCTGCACTCGGAGTTCGAGCTGAGCCTGCACGCCAAGTTCCACACGAAGTCGCCCGGCTGCAACAGCCTGCAGGAGCCCGTCTGCGCGCTGTGCCTGGAGCCGCTGCCCGGCGCCGGCGACACGGCCAAGCTGTGCGACAAGTGCTGCCGCAAGCACAACCTAAATGGCAAGCGCAAGGAGCAAGTGCAGCAAGCTGGGGCAGCAGcttccgctgcagctgcagccggcgcCTACCTGGAGCATCGCTGCAATCTGTGCAAGATGATCCTGCCGCACGCCCAGAAGCTGCAGGAGCACCTCGTCGAGCACACATTCGCGGGCACCGAGCAGCGCGGCTACAACTGCTACATCTGCTCGGCCGTCTTCACGGCGCCCGCCGGCCTGCTCGCCCACATCGGGGAGCACGGCACGCGGCCCTACGACTGCAACCTGTGCCCCGACAAGTTCTACTTTCGCGCCGAGCTGGAGCACCATCAGCGGGCGCACGAGCTGCGCGCCCAGGCGCCAGCGCCTGTGCCAGTGGCAGCgcctgcagccgccgccgcacgGCCCAAGCAGGAGACGCACAGCTCGGAGGCCAGCTCCCCGCTGACGCTCAGTCCCAGCCACGTCAAGCAGGAGCTCTACGAATCGGAGCTGCCCAACTCGCCCAGCGCGGCCGAGTTGcccgcgcagcagcagcaggaggaggaggagtacaTCGAGGTGGAGCAGGTGCCGCAGGAGACGCTGCGCACGGGCGAGCTGCTCAGCACCGagcgctccagcagcagcgcctaa
- Protein Sequence
- MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNSQQQQQQQQSQQSQSQSQQLQPGEEPGEEAKANGDAAAQPTELEQELSKPKRPAHLHHHHHHHYHHQQALKIANKLRKINKDAKLAAGQGQGHGTAAKFDKLTGEGLKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSNGSLHKRRYALALASDSSPSRLEFPKRARVTPTANATIATPTPLLRCSYCPKATEFSSLEQLNAHLQSTHEQQQQTQQQKDADGQTNGFQLSCEYCTMRFANIAALFQHMRVTHLDRLSSPNSYYEHLSRLGSPQSKLAPPEKPEQELPTDLSSNKRRPLTPPPPATSQPALPPPPPGIFFCNQCNAGLPDFESFRNHLKSHIAEGMQLICPHCGLSLPEQGEFERHVVAHFLISSSEFNCCSTSCGKSYAKAEELHQHLLAEHVQTMLKCVLCSELCENRMAMQLHLACAHSQETKLLRCSACLELFRSDADFHVHVKTRHQLQGSQGSSHALGNPPAPANPLQCMFCRAVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGAKDTKESPSMGSLYVNALLPPLAAAAAAAAAANANANNNNNNSNLHIDYNVAFKGLFGGNNGNPSSKFYNSPLQVDTKQAPHPALMYGLSQRYLMEMYAAKANSPANAGAAELPTPQPVQSSTAAGNNNNNNNSSGSNGYSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNYKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGQQLEHVAAFRAHLGEHGNDGNLPMACICCRQTLHSEFELSLHAKFHTKSPGCNSLQEPVCALCLEPLPGAGDTAKLCDKCCRKHNLNGKRKEQVQQAGAAASAAAAAGAYLEHRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGYNCYICSAVFTAPAGLLAHIGEHGTRPYDCNLCPDKFYFRAELEHHQRAHELRAQAPAPVPVAAPAAAAARPKQETHSSEASSPLTLSPSHVKQELYESELPNSPSAAELPAQQQQEEEEYIEVEQVPQETLRTGELLSTERSSSSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00502755;
- 80% Identity
- -