Basic Information

Insect: Drosophila pegasa
Gene Symbol: -
Assembly: GCA_035046225.1
Location: JAWNOD010000076.1:11953877-11955681[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.13 7.8 7.1 1.6 2 23 350 372 349 372 0.95

2 7 0.00037 0.023 15.0 0.5 1 23 379 402 379 402 0.97

3 7 5e-07 3.1e-05 24.0 2.2 1 23 407 429 407 429 0.98

4 7 0.00021 0.013 15.8 0.2 3 23 436 457 435 457 0.91

5 7 0.0007 0.043 14.2 0.8 1 23 463 485 463 485 0.99

6 7 6.4e-05 0.004 17.4 4.3 3 23 493 513 492 513 0.97

7 7 8.2e-05 0.0051 17.1 0.7 1 23 519 542 519 542 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.13	7.8	7.1	1.6	2	23	350	372	349	372	0.95
2	7	0.00037	0.023	15.0	0.5	1	23	379	402	379	402	0.97
3	7	5e-07	3.1e-05	24.0	2.2	1	23	407	429	407	429	0.98
4	7	0.00021	0.013	15.8	0.2	3	23	436	457	435	457	0.91
5	7	0.0007	0.043	14.2	0.8	1	23	463	485	463	485	0.99
6	7	6.4e-05	0.004	17.4	4.3	3	23	493	513	492	513	0.97
7	7	8.2e-05	0.0051	17.1	0.7	1	23	519	542	519	542	0.97

Sequence Information

Coding Sequence: ATGGAAACTTGCGGCGTTATTATGAGTAGAGCCGGCGAATTCGAAAATTTTCTCATGCGTTGCTCATATTGCACCATAGACATGGCCATCGACAAGTGGCAGGAATTCGTGCTTCACTTCCGCGATACGCACGGCTGGAAATCGACGGATAACTCCGAATGTTTGAGCATAGAGCAAATAGCTGTAAATGAAGACAGTGTTGAGGAAAAGCTGGTGATCATGCCCATCGAGGAGCAAACTGTTGCAGAGCCGGATGTGCCTAGACCCTGTTCAACAATGTCGGATGCTAGTTTCAGTGAAAATAGTTCTGTAAAAAGTGAATCCACAGCCCAAACTGAAGACGAGGATGTGCACAGTTCGAATTCGTATACAGACAAGTTTAATCCATCATTTTTTCGACGAGATCCACGCACTCTGAAGTTCATCGAGTGCTACAAGAGTCAGCCATGCCTCTGGAATACCGGCTGTAGTGAATATAAGGATCACAGTGCATGTAAAGCTGCCTATCAGCAGCTCATAAAGGAGCTGGATGCTCAGATATCTGTTGTCTTCACAGAGCACTCGTTGAAGGCGGCGATTAAGAAGCTGCATATGCAGTATAATATCGTCGAGAAGCGTGTGATGAACGGCAACCAAAAGCCGAGTTCGGTGGCCTTTAATCACTATACAAGCTGCAGCTTTCTGAAAGCAAGTCAAGACCAGCTGCATGCCTTTAAAAGTTCAATTATTCAGTTAAACTTTTGTAAACGCAACAAGCCCACTACAGACTTCATAGAGCTGTATGCCAGCTTTCCCCAGCTCTACGACTGCAAGCACAAGGATTTCTCAAGCATAGATGCTCGCAAGCAGGCCTATGAAGCAATGGCAGCTAAGACTGCAGTGCCACATGGTGGCATCAACTGCGATGACGTCTACCTCGCCATACAGTGCCTTCGCCAGTGGTACTACAAGAGTACAAAGCACGCGATTAAAACGACGAACGAATCGGAGCTCTTCTATTTGAAAGCCTGTGCCTTTCTGCCACCTAAGATGTTCAAGCAAAGGCTAATTTGTGAATACTGCCAGCAGGAGACATCATCGGATCATGTGCTGCAAGCGCACCTGTGCAAGGTGCATGGCATCGGGGAGCTGCCCTTCAAGTGTACGTCGTGTGAGCGCAGCTTTGTGGGCCGAGCCGAGCTAGCGACGCATGTGCAACGCTTCCACATTGGGAAGACCCACAAGTGCAATTATTGCGAGCGCACCTTCGCTGTTAATTCAGATCTTCGTCTgcacatacgcacgcacaccgGAAATAATATACTTTGTGAGCTGTGCGGCAAAGCGTTTAGATTAAGGTCTCAACTGAAGCTGCACGTCACTGCCATTCACACAAAGATCCGAGCTTTTAAGTGCACCATGTGCCCGAAGGATTTTCTAAAAAAGGTTGATTTGTCGGACCACATTAAGAGCCATTTAAATATCCGGGATAAGATATGCACAACGTGTGGCAAAGGCTTCACCAGTTGCCACTCGCTCATTAGGCATCGACAAATACACTCGGAAATTAAGAAGTTTGCCTGTAAACTTTGTGATGCTAGATTTTCACAATTTGTCGGCCTCAACTCGCATATGAAACGTACCCATAATATTGTCCGGAATAATGCACAAAAATCATCAGAGACTGTAATTCCAGAAACGACTAATTGA
Protein Sequence: METCGVIMSRAGEFENFLMRCSYCTIDMAIDKWQEFVLHFRDTHGWKSTDNSECLSIEQIAVNEDSVEEKLVIMPIEEQTVAEPDVPRPCSTMSDASFSENSSVKSESTAQTEDEDVHSSNSYTDKFNPSFFRRDPRTLKFIECYKSQPCLWNTGCSEYKDHSACKAAYQQLIKELDAQISVVFTEHSLKAAIKKLHMQYNIVEKRVMNGNQKPSSVAFNHYTSCSFLKASQDQLHAFKSSIIQLNFCKRNKPTTDFIELYASFPQLYDCKHKDFSSIDARKQAYEAMAAKTAVPHGGINCDDVYLAIQCLRQWYYKSTKHAIKTTNESELFYLKACAFLPPKMFKQRLICEYCQQETSSDHVLQAHLCKVHGIGELPFKCTSCERSFVGRAELATHVQRFHIGKTHKCNYCERTFAVNSDLRLHIRTHTGNNILCELCGKAFRLRSQLKLHVTAIHTKIRAFKCTMCPKDFLKKVDLSDHIKSHLNIRDKICTTCGKGFTSCHSLIRHRQIHSEIKKFACKLCDARFSQFVGLNSHMKRTHNIVRNNAQKSSETVIPETTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00473288;
90% Identity: iTF_00532613;
80% Identity: -