Basic Information

Insect: Drosophila pegasa
Gene Symbol: ct
Assembly: GCA_035046225.1
Location: JAWNOD010000520.1:248637-290011[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.1e-27 5.8e-23 80.6 0.0 3 72 1157 1227 1155 1232 0.95

2 3 7e-32 5.7e-28 96.6 0.0 3 77 1663 1738 1661 1740 0.96

3 3 4.3e-31 3.5e-27 94.1 0.0 3 76 1935 2009 1933 2012 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.1e-27	5.8e-23	80.6	3	72	1157	1227	1155	1232	0.95
2	3	7e-32	5.7e-28	96.6	3	77	1663	1738	1661	1740	0.96
3	3	4.3e-31	3.5e-27	94.1	3	76	1935	2009	1933	2012	0.96

Sequence Information

Coding Sequence: atgaaaacaattttcaagcTTAAGCAgctcagcggcggcagcaacaacaacgaccaGGACGAGGGCGAGGAAGAGGATGAGGACGAGGCGGAGATTCACCAGAGAACACGCGCTACATTAGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTATCGACTGGCACGcccggcagcaacagcgacagcaacagcgacaacaacaacacatccGAATCCCaactagcaacagcagcggccacagcggcagcaacagcggccacagcagcggcagcagcagcagcggctacaTCATTGGCCAGCGGCGAGGAGGAGGCCACGGGCaacagcgagagcgagagcgacaaGCTGTTGAATAGCTCGATTGTTGCAGCGGCCATCACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAACACCAATACACCGTCGCCATCGCCGCCGTTGCTCagcgccgagcagcagcaacagttgcagagCAGCCTGCAGaacggcgtcggcgtcggcggcgctTGCCTGAACCCGAAGCTCTTCTTCAATCACGCCCAACAGATGATGATggaggcggcagcggcggctgcagcggcggcccgggcggcagcagcggcggcccagcagcagcagcaacagcagtcgcCGATGCATTCGCCAATTGCGGCCACTGCAatcaacacaacaacaacaacagcaacagcaacagctgccacagcagcagcagcagcagcagcaacagcagcagcagccacacaaCAGCAATCAGCACGAGATATTGCTGAGCCGATAGCCAGCAGCAATTGCGCCGCTGACGATgatgaggacgacgacgaggaggatgCGTCGATGCAATCGAATGTGGCGCACGCCGATGGCGATCTGGACGACGACGatatggagctggagccggagcaTGTTGCTGAGACGGGCAGCATTGCTGCCGTCGAGCCGACATTGGCAAGAACTGAAAATGTTGTCGATGCGACTGCCAATGCAAAGACAACcaacaatgatgatgatgatgatgacgacgatgatgatgatgatgttgaggGCGTTGATAgagatgccgatgccgatgtgGCGGCTGACGATGAGCTGGAAGCTAGCTTaaatgtcaacaacaacaacaacaataccagcagcaacaacaacaacaacagcaatgctgATAGCTGTAGtcgaaagaacaacaacaacaacaacagtgaaaCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATAGCGCCGAGGATGACGAttgcaccaacaacaatactaacaccaacaataacaacaacaacaacaacaccagcaacaacggcaacagcaatgagAAGCGCAAAAAGcgcaacgccagcaacaacaacaataacaacaacaacaacaatcagcccGCTCTACTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCCCTGGAGCAAACTCACCTGGTACAGATCCAGAGGCTCGAGGAGCACCTGGAGGTGAAGCGACAGCACATCATGCGCTTGGAGGCTCGCTTGGATAAGCAGCAGATAAACGAGGCTCTGGCCGAGGCTACGGCACTGGCTGCCGCTGTCAATGCCGCTGcgactaacaacaacaacaacaacaatagcaacagcaacaacaacaacagcagcagcaacaacaacaacaacaaccacagtagccagagcagcgacaacaacaacgtcgtATTCAAGACAACTGATCTAACATCGACCCATCGGCAtaacgacgatgatgacgaggACGATGACAACGATCACGACAATGAGCTGCGCGATGCCGATGGCAAtggcgacgatgacgacgacctGCACCTgaccaacagccagcagcagcagcagcaacactcaGCCTTAGTCAACAATCGCCACGACGATGAGCAGGACAAGGACGATGCCGAGGACCACGATGCCGACATGTCgaatgccacagccacagcggaCAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACCTGAACGTGCTCAGTCCACAGTCGGCCATTGCCACAGCCGCCGCggccgcagctgccgccgcctgtgCCAACGATCCCAACAAATTCCAAGCCCTGCTGCTGGAGCGCACCAAAGCTCTGGCCGCCGAGGCCCTGAAGAACGGCAGCAGCGATGCAGCTAGCGATGAAATGCCGCCAGCAGCTGTAGAAgaagatgcagcagcagcagcagcagcagcagcagccgcaacagcagcagcagcagcaacagttgccaagCCAGAATTGCACAAAACTGGAACGAATGAGAATGAAACACTGGTCGAGGCCAATTTGCAGCCAAAGATCGAGATCTTAGACACAGACGAGGCGCCAGCAACGGCTCAGACGCTCGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAAcgagcacagcagcagcagcaacagcagcagcagcaacagttatagcaccaacaacaacagctgcagctgcaactgggAGCAAAACGCCaacaatttatcaaaatgccaatgtggtgcagcagcaattgttgcccccaccgccgccgccgccgccgccacaacaacaacaacagcaacaacaacaacaacagcaacaacactatcagcaacaacaacagcagcaacagcaacagcaacatggaCCCTCGTCCACTGTGCTGCTGAGTCAATTGGTTAACTCCACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCCACACACCACcaactccagcagcagcagcagcaacagccgcagcagcagcaactgctgcacaacagcagcaatagcagcaacagcagcgatcCACTGAATCATCACCACCACGCGCACCACCATGCCGGTGGCCATGCGCATGGCCAGCTGTTGCATACGGCCCACCACTTGCACCATGGCGCCGACTCGAACTCGTCCAGCGCCACCAGCACGCCCAACAGCACCGCCCAGCTGGCGGCGAGCATTGCCAGCACGCTGAACGGCAGCAAGTCGCTGCTGCAGGCAGCGGCCGCTGCCAACGTCGCTgcggccgccgtcgccgtcgccgaggacaacaacaacagtctgACCCCGAATGCGAACGCGGCCGTGGCCGCAGCCGCCATGGCTGCGCATGCCCAGCATGCCGCCGCCTTGGGTGCGCCCGGCTTTCTGCCCAATCTGCCCAATCTGCCCAGCCTGCCGGCGTTCCAGTTCgcggctgccgccgccgctgggcAGGAGGCGCGTGCGCACTTTCGCTTCGCGGAcgccgagctgcagctgcagccgggcGTCTCGATGGCTGGCCGCCTGGGCGAGTCGCTGATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAATCAGGCCCTCGACACCCTACACATCTCGCGTCGCGTGCGCGAGCTGCTCTCCGTGCACAACATCGGCCAGCGTCTGTTCGCCAAGTACATATTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCCAAGCCGTGGGACAAGCTGACGGAGAAGGGTCGCGACAGCTACCGCAAGATGCACGCCTGGGCCTGCGATGACAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGattCTGGACTGCCTCAGTATGCTGGTCGCGGCGCTGGCGGCGACGACTCCATGTCCGAGGATCGCCTCGCACACATACTCAGCGAAGCCTCCTCCCTGATGAAGAGCAACGTGGtcgccgcccagcagcagcagcagcagcaggagcatcAGCGTCGTCATGCCAGCGACGATACGCACAGCAACGACGACAGCAAGTCGCCGCCGCAGAGCTGCAGCTCGCCCTTCTACAAGGTGGAGCACCagatcaagcagcagcagcagcagcagcaacagcagcaacagcagcagcagcagcagctgcacgtcTCCGAGCATGCGCAGCGGGAGCAGCgcgaggcagctgcagctgcggccgccgccgccgccgtggcCGTCCACCAGCGCGAGCAGCGCGAACAGCGCGAGGCCGTGcagcgcgagcagcagcagcgcctgcgccACGAGGATCTCGCCCAGGACAAAATGGCGCGACTCTATCAGGAGCTAATGGCGCGCACGCCACGCGAAGCCGCCTTTCCCAGCTTTTTGCTGTCGCCATTCTTCAGTGGCGCCGCGGGCATGCCTGGCGCCGCCGCCAATCCATTCCCCGCCGCCATGGCCGCCGACGAGAACATGCGCCACGCCTTCGAGCGCGAGATTgtcaagctgcagcagcagcagcagcagcagcaggcgcagcagcagcagcaggccgccAGCTTTCCCAACTTCTCCAGTCTgatggcgctgcagcagcaggtgctgaACGGGGCGCAGGATCTGTCGCTGGCCGGCAAGGAGATCAAGCTGAATGGCCAGCGCTCGGCGCACGACCagcacagcggcagcggcagctccaaGGACGGCGAGCGCGGCGACGACACCGAGCGCAGCTTTCCCGCCCTGCCGCACGCACGCAAGTCGGACGGCGGCAATACGCCCGCTCCGCCCGCACCAGCTGCGGTCAGTggcgccgccgtcgtcgccggcgcaggcagcagcagcggcagtggcagcagcggcaatccGCTCGCCGGCAATCCCCTGGCCGGCGCCAGTGGGCACGGCAGCAACTCGGCGGCGCCCAGCCCGCTGAGCAACTCGATCCTGCCGCCGGCGCTGAGCAGCCAGGGCGAGGAGTTCGCGGCGACGGCGAGTCCGCTGCAGCGCATGGCCTCCATCACGAACTCGCTGATCACGCAGCCGCCGGTGACGCCGCACCACTCGCAGCCACAGCGGCCCACGAAGGCGGTGCTGCCGCCCATCACGCAGCAGCAGTTCGACATGTTCAACAACCTCAACACGGAGGACATCGTGCGGCGCGTCAAGGAGGCGCTCTCGCAGTACAGCATCTCGCAGCGTCTGTTCGGCGAGTCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCGGATCTGCTGGCGCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGCGAGCCGTTCATCCGCATGAAGATGTTCCTGGAGGACGAGAACGCGGTGCACAAGCTAGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCACAGATGCCGCAGGGCCTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCCCAGGCGCAGCACATCATGCAGCAGatgcaggcggcggcggccatgTCCGCagccatgcagcagcagcaggcagccgcCGCCCAGGCCGCCGCCGTGCagcaggcccaggcccaggcccaggcgcaGCAgagccaccagcagcagcagcagcaggcggcgcagcagcaggcccagcagcaggcgcagcagcagctgctccaccacCAGAACATGCTGCTGACCTCGCCGGGTCTGCCGCCCCAGCACGCCATCAGCCTGCCGGCGGCGAGTGCGGCCGGCGGCCAGGCGGGCGGCAATCCCGCGGCGGTATCGGCGCCTGGTAGTGGCGAGAAGAAGCCCATGATGATGCCCGTGCATGGTGGGGCGCATGCGCCGAATGCCATGCGCAGCCTGCATCAGCACATGTCGCCGACGGTGTACGAGATGGCGGCGCTGACCCAGGACCTGGACACGCACGACATCACCACGAAGATCAAGGAGGcgctgctggccaacaacaTTGGGCAGAAGATCTTCGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAGCCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTCTGGCTGAGCGACGCCAACAATGTggagcggctgcagctgctcaagaaCGAGCGGCGCGAGGCGAGCAAGCGCCGGCGCAGCACCGGCCCCAACCAGcaggacaacagcagcgacaccTCCAGCAACGACACCAACGACTTCTACACGAGCAGCCCCGGACCCGGCTCGGTGGGCTCGTCGGTGGGCGGGGCGCCGCCCAGCAAGAAGCAGCGCGTGCTCTTCTCCGaggagcagaaggaggcgcTGCGACTGGCCTTTGCGCTCGATCCGTATCCGAACGTGGGCACCATCGAGTTCCTGGCCAACGAGCTGAGCCTGGCGACGCGCACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTCAAGCAGCAGGTGCCGCACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTCCGCattctgctgcagcagcgcctcgtCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGCGCGCCCATACCCTACCCACCGTActtcgccgccgccgccctgcTCGGCCGCAGCCTGGCGGGCATTCCAGGTGCTGCCGCAGCGGCTggagcggcggcagctgcagccgctgccgttggCGCCGCTGGCGGCGATGAGCTGCAGGCGCTCAACCAGGCCTTCAAGGAGCAGATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTACCAggacgagctggagctggacgcCAGCGGCCACAACATGAGCGACAACGAGTCCTTGGAGGGCGGCCCCGGCGAGCCCGAGCACACGCCCATCTCGGACTACGAGAAGGCGCTCCAGAAGTCGGCGCTCGCCTCCGCCGCCGGCTACTTGAACAACGCCGTGCGCAGCTCGCGCCGCAAGCCCGCCGCCCCCCAGTGGGTCAATCCGGCCGGCGCCGGCGCGCCCACAGCAGCGGGCGCGGCCATCGCAGCCGGGCAGGAGacaggcggcagcggcagcgagcgCATCATCAACGGCGTCTGCATCATGCAGGCCTCCGACTACGGCCGCGACGAGGCCGACAGCGTCAAGGGCGGCGACTCCAATGCCGACGGCGAGCAGGACGAGCATGCGCAGCTGGAGATCGAGCAGCGCTTCATGGAGCCGGAGGTGCGCATCAagcaggaggaggacgacgacgatgagcaGGTcgtgccacagcagcagcagcagctggacgaTGACAGCGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTGCGCGTGCGCCGGCTgagcagcaacggcgacgccgacgagcactgcgcggcagcagcagcggcagcgactgcgacgccagcagcagcggcggcagcggcagcagcgtggAACTACTAA
Protein Sequence: MKTIFKLKQLSGGSNNNDQDEGEEEDEDEAEIHQRTRATLAEKEVNTLKEQLSTGTPGSNSDSNSDNNNTSESQLATAAATAAATAATAAAAAAAATSLASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGVGGACLNPKLFFNHAQQMMMEAAAAAAAAARAAAAAAQQQQQQQSPMHSPIAATAINTTTTTATATAATAAAAAAATAAAATQQQSARDIAEPIASSNCAADDDEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVAETGSIAAVEPTLARTENVVDATANAKTTNNDDDDDDDDDDDDVEGVDRDADADVAADDELEASLNVNNNNNNTSSNNNNNSNADSCSRKNNNNNNSETQHVALRDNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNNNTSNNGNSNEKRKKRNASNNNNNNNNNNQPALLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNSNSNNNNSSSNNNNNNHSSQSSDNNNVVFKTTDLTSTHRHNDDDDEDDDNDHDNELRDADGNGDDDDDLHLTNSQQQQQQHSALVNNRHDDEQDKDDAEDHDADMSNATATADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGSSDAASDEMPPAAVEEDAAAAAAAAAAATAAAAATVAKPELHKTGTNENETLVEANLQPKIEILDTDEAPATAQTLEEQLVNSYWRRGFETSTAAAATAAAATVIAPTTTAAAATGSKTPTIYQNANVVQQQLLPPPPPPPPPQQQQQQQQQQQQQHYQQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAATHHQLQQQQQQQPQQQQLLHNSSNSSNSSDPLNHHHHAHHHAGGHAHGQLLHTAHHLHHGADSNSSSATSTPNSTAQLAASIASTLNGSKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPGFLPNLPNLPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQQQEHQRRHASDDTHSNDDSKSPPQSCSSPFYKVEHQIKQQQQQQQQQQQQQQQQLHVSEHAQREQREAAAAAAAAAAVAVHQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIVKLQQQQQQQQAQQQQQAASFPNFSSLMALQQQVLNGAQDLSLAGKEIKLNGQRSAHDQHSGSGSSKDGERGDDTERSFPALPHARKSDGGNTPAPPAPAAVSGAAVVAGAGSSSGSGSSGNPLAGNPLAGASGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQQSHQQQQQQAAQQQAQQQAQQQLLHHQNMLLTSPGLPPQHAISLPAASAAGGQAGGNPAAVSAPGSGEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESLEGGPGEPEHTPISDYEKALQKSALASAAGYLNNAVRSSRRKPAAPQWVNPAGAGAPTAAGAAIAAGQETGGSGSERIINGVCIMQASDYGRDEADSVKGGDSNADGEQDEHAQLEIEQRFMEPEVRIKQEEDDDDEQVVPQQQQQLDDDSAEKQLKVINEEKLRMVRVRRLSSNGDADEHCAAAAAAATATPAAAAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00495757;
90% Identity: iTF_00476522;
80% Identity: iTF_00572497;