Basic Information

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.3 2.3e+03 -1.1 0.0 19 61 38 81 24 98 0.60

2 3 1.1e-10 2e-07 31.2 0.0 12 89 139 206 132 206 0.78

3 3 4 7.2e+03 -2.7 0.1 74 84 263 273 244 279 0.52

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.3	2.3e+03	-1.1	0.0	19	61	38	81	24	98	0.60
2	3	1.1e-10	2e-07	31.2	0.0	12	89	139	206	132	206	0.78
3	3	4	7.2e+03	-2.7	0.1	74	84	263	273	244	279	0.52

Coding Sequence: ATGAACAATCCGCGGGATCATCTGCACTGCAGCAGAAGGGGCTGCACCTACACAACGAACAGGGCGTACAATCTGGAACGCCACGAGCGAAACCATGACAAAGGCAAGGTGCCCATATCGCAGTGCCAGCCATGCCCGCACTGTCCATATGCCGCCGGATCGCTGCACAATCTGATGCGCCACATAAGCAAGAAGCACACAGGAACTGTTGTCAAGACACAGCAACAGGTTGTAGCAAAGCAAGTAGCGCCTCCAGCGCCACctccagcaccaccaccagctcAACCACAAAATGAGCTGCCCGCCACACAGAAATCTGCGTCAAGTGTAGAGCCCAGAGCCGAGCCGAAGCAGGCAGTGGATCAGCCGGCGTCGCTTTGGTTCTGGAcgacgccgcagcagctggagaagaaTTTCATAAGGCGCAGTGGCCTTAAGGGCGAATGCAAGATATTGGAGCGCAGTGTCAATCTATTTAAATTATACGCTTTGGTGCAGGCGCGTGGAGGAGCTCTCGATGTCGACGAATGGGACGATGTGGCAGCTGCGCTGAGTCTGCCGCCCGGTTCAGGCTGCAATGTGGGCGTCAAGTACATGGAGGTGTTGTTCGAGTTcgagaagaaggaggaggagcgtCTGCAGGAATGCAAAAGTGTGCCAGGTGTGCCGCCCTGGTGGGACGATGGCGACGTGGTCGGCGACGACGCTGTCCAGTGTGTGGCCGAGGGCAAAGTAGTGTGTAGCCAATGGTGGAAGCATATGAATCTACCCCTTCTAACTGTACAAAATGCtgttattaaattgatttatgataAGTATTATAGCAATCACTTGAGCCAGAGCAAACCGTTTCAGCGGTTCTGCGTAAAAGACTCCTGGCTGCGAGCCACAATGTTGAATTATCAGGAGCTAACGTATCAACTACATTTGAAACATAGTTCTGCTTCCTGA
Protein Sequence: MNNPRDHLHCSRRGCTYTTNRAYNLERHERNHDKGKVPISQCQPCPHCPYAAGSLHNLMRHISKKHTGTVVKTQQQVVAKQVAPPAPPPAPPPAQPQNELPATQKSASSVEPRAEPKQAVDQPASLWFWTTPQQLEKNFIRRSGLKGECKILERSVNLFKLYALVQARGGALDVDEWDDVAAALSLPPGSGCNVGVKYMEVLFEFEKKEEERLQECKSVPGVPPWWDDGDVVGDDAVQCVAEGKVVCSQWWKHMNLPLLTVQNAVIKLIYDKYYSNHLSQSKPFQRFCVKDSWLRATMLNYQELTYQLHLKHSSAS

Sequence clustering based on sequence similarity using MMseqs2