Basic Information

Gene Symbol
grh
Assembly
GCA_035046225.1
Location
JAWNOD010000076.1:11760645-11796984[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.039 2.1e+02 0.9 2.2 78 110 188 220 106 268 0.69
2 3 0.61 3.3e+03 -3.0 2.1 94 104 485 495 458 513 0.51
3 3 3.7e-63 2e-59 200.4 0.5 24 221 624 816 610 818 0.94

Sequence Information

Coding Sequence
ATGATGCAggaggccagcagcagctatgcCATATCCTACACAGACTGGATAGCCGAGTCACGacgcagcagctacagcagcctagacgcgcagcagcagcagcagcagcaactgcagcatcaacagcaactgcagcagcagcatctgccgcagcagcagcaactacctCAGCATCATTACTATGAGCCGGCCAAGCAGCCGACGATGCAACACCTGCCGCTCACTGCCGCTGGGCTAATGCAGTCGGTGGCCGATGAGATACAATTGAGCGAGCAGCACTCGACGCCGCCGCccccagcagccgcagcgcccACCGcagcctcctcctcctcctcctcctccgccgccTATGCTGTCTACAGCTACTACAGAGATGTCGATGCAGAGCCAAGCAgatcacagcaacaacaacagcagcaacaacttgtgTGGAGCAATGCGAGCAGCGCCGGCAAGCTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCGTCGTCGTCCGCCACAACCGGCGTTGTCTCCACAACAACAATctcgcatcagcagcaacagcaacaacaacaacaacaacagcagcaacaacagcagcaacaacaacagcaacaacaacagcagcagcagcatcaacagcagccgccacaTCCCAGCGACATTGTGACCATAACCACGGCGGGAGTGGGGAGCGCGGGCTCGATCGTCTCcgctgcagtgcagcagcagcagcaacagcagcagcagcagcagctgctcagcatCAAACGTGAGCCCGAAGACCTGAGCAAGGATCCGGCCAAGAATGGCAGCCTGGGCGCCGCGGCGAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGGAGTGAGGCAACTGAGGCAACTGAAATAGCCAGTAagacggcaacagcagcagcaacagccgcagcaacagcaacaactgccacTAGTCCCGCcagagcgacagcagcagatCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCGCACCAGAACAGCAATGGAACCAGCACACAGCAGAGCAGCCTGCAAGCCCAGAGCCCCAGTCCGGGGCCGTACATCACAACGGACAGCTACGGCATGTACACGACGACGCGACTGCCGCCCGGACCGCCACCTGCCACCACATTCATAACGGAGCCCTACTATCGCGAGTACTTCGCGCCCGACGGCCAGGGCGGCTACGTGCCAGCGGGCACGGCGCGCAGCCTCTACGGCGAGGACGTCTCCGTGACGGCCGCCGCCCAGCCACAGCCCGTGGGCGGTGTCTACGAGGCGCGCTTCAGCAGCAACGcgcccaccaccaccacagtGCTAACCAGCAGCAATGCGCACCACCacagtcaacagcagcagcagcaacagcagcagcaacaacagcagcaacagcagcagcagcagcaacagcagcaacaggagcagtcGGGCAAGAACGGCGGGACGCCGCTCTATGCCAAGGCTATTACGGCGGCGGGTCTGACCGTGGACCTGCCCAGTCCCGACTCGGGCATTGGCACGGACGCCATAACGCCGCGGGATCAAAATCACATACAgcagTCCTTCGACTACACGGAATTGTGTCAGCCGGGCACCCTCATCGATGCCAACGGCAGCATACCCGTTTCAGTGAACAGCATACAGCAGCGCACCGTGGTCCATGGCAGCCAGAATAGTCCGACCACATCGCTGGTGGACACGAGCACAAATGGCTCGACACGTTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGctgacaaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTACAACCTGGAGAGCCCGATCAGCTCGTCGCAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAGTTTTGGCATAGTCGCCAGCATTCCGTGAAGCAGCGGATCTTGGATGCAGaTACAAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCAGCCAAGatCAACATTGCGGTTCAGTGCCTCAGCACGGACTTTAGCAGTCAGAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCGCGCGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGCGATGAGGAGCGCCGCGCGGCCAAGCGCAAAATGACAGCAACTGGACGCAAGAAGCTGGACGAGCTCTATCATCCGGTCACAGATCGCTCCGAGTTCTATGGCATGCAGGATCTTTCCAAGCCGCCAGTGCTCTTCTCGCCCGCCGAGGACATGGAAAAGAGCTTCTATGGCCATGAGACTGACTCGCCGGAATTGAAGGGCGCCTCGCCTTTTCTGTTGCACGGCCAGAaggtggccacgcccacgctcaAGTTTCACAATCATTTTCCGCCCGACATGCAGACtgATAAGAAGGATCACATATTGGATCAGAGTATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCGCCCATGAAACGGGGTCGCATGACGCCGCCGACCACGGAGCGCGTCATGTTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGCTGCATGTGGTGCCGCCCACGACGATTGGCCTGCTGAATGCGattgaaaacaaatacaaaatctcAACATCGagcataaataacatatatcgCACAAATAAGAAAGGGATTACGGCGAAAATtgatgatgatatgatatccTTCTACTGCAACGAGGACATCTTCTTGCTGGAGGTGCAACAGATCGAGGACGATCTGTACGACGTGACGCTCACAGAGCTGCCCAATCAGTGA
Protein Sequence
MMQEASSSYAISYTDWIAESRRSSYSSLDAQQQQQQQLQHQQQLQQQHLPQQQQLPQHHYYEPAKQPTMQHLPLTAAGLMQSVADEIQLSEQHSTPPPPAAAAPTAASSSSSSSAAYAVYSYYRDVDAEPSRSQQQQQQQQLVWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISHQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQLLSIKREPEDLSKDPAKNGSLGAAANGSVITQKILRVDAARSEATEATEIASKTATAAATAAATATTATSPARATAADLEMYATTGGTQIYLQTSHQNSNGTSTQQSSLQAQSPSPGPYITTDSYGMYTTTRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVTAAAQPQPVGGVYEARFSSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQEQSGKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLSKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTSSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00544231;
80% Identity
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