Dpec009083.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila pectinifera
Gene Symbol
srp
Assembly
GCA_008042775.1
Location
VNKC01003802.1:114720-124857[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-18 3.3e-15 55.2 1.9 1 35 714 747 714 748 0.97

Sequence Information

Coding Sequence
ATGACCAAGACCAGCAAGCCCAAGGACAAGGGGCCGAAAGCGGGGGGCAATCTTCTCAAGAAGGCGGCTGACATGAAGATCCTTACGGCCAagtccaacaacaacagcaagcagcagcagcaacaggccaAGCAGCAAGGACGAACAACAGCAGTGACTGCTACGGCAGCAGGATCAACCGCAAGCGCGAAAGAGACGGCACCAGCGATCGCAACGGAGCCCCAGCCAGAGGCAGCGACGCAGGCAGAGGCGGCACAGGCAGAGccagcgacgacgacaacggcgACGGCGAATTTATCGTTACTTGACGCTCGTTCGCAGGCTCACACATCAGTTGTCAGCGAAACACCGAAGCAGTCGGTTAAtaccacagcaacagcaccatcAGAATCTGTGCCGGCAATCAATGACGATCGAACGGATAAGCCGGACCTGTACGCCTTGGCCGCCTCGCACCACCTCTTCGGCCACTTTTCCCACTACCCCTCGAGTCACCCGCCCGCCCAGCTCTACGAGCACTACGCCAGCACGGATCCCATAATGAGAAACAACTTTGCGCTGTACAGCTTCTACgggggaggcggcggcggcggaggaggaggaggaggcgtaAGCGACCCCAGTCACGAGCAGCTGCCCCATCATGTGGTGGCAGCGGcacaggcggcggcagtggcagcagcagccgcccacAGCTCCACGCCCAACATCGACGAAGTGATCCAGGACACGCTCAAGGACGAGTGCTTCGACGATGGGCACAGCAGCAACTACCATGTGCTGACCTCCGTCTCGGACCTGCACACGCTCAAGGAGGCCAGTCCGGTGCCCGGGATCGCCTATGCGCTGACCAACGATCAgatcctccagcagcagcagcaccagcaactgcatcatcatcaccaccagcaacaacaacagcagcatcagcagcagcaacaactcttccaccagcaacagcagcaccagcaccagcacaaCAACTCGGCCAGCTCCGTGGGAGGCGACTCGCCCTCATCCTCGCATGCGCTATCCTCGCTGCAGAGCTTCACCCAGCTGACCAGCGCCACCCACCGCGACAGCCTCTCGCCGGCGGAGCACGGCGGCTACTTCGGGGCGACGCAGCTGAGCCCCAGCTTGCAGAACAGCTCCGTCTACGCGGGCCCCTTGCTCACCCAGGCCGCCAATGGCATGCAGTATGGAATGCAGTCGCCCAACCACACCCACGCccatctgcagcagcagcagcatcaccagcagcaccaccagcagcagcagcagcagcagcaccatcaccaccagcaccaccacaactccagcagcagcagtccggGGCCAGTGGGTCTGCTCCACTCGAGCTCCTCGGCGGCCACGGCAGCGGctgtggcagcggcaacggcggcggtcAATGGCCACAACAGCTCCCTGGAGGACGGCTACGGATCGCCGCGGAGCAgccacagcggcggcggtggaggaggcaGTGGCAACGGTGGCGGTGGCACTTTGCCCGGCTTCCAGCGCATCGTGCCCGGCAGCAGTGGGTACGGCAGCAGCGTGGCCAATGGCCCAGTCAGTGGCGCCGATCGCTACGCTCCGCTGGCCAATTACCGCGGTCAGAACGAGGCCTGGTACGAGCCCCTCAGCTACACGCAGGCAGCTGGACAGGCGCAGCTGGGCGTTGGAGCCGGTGTGGTCACCAATGTGATACGGAACGGCAGGGCCATCTCGGCGGCCAATGCAGCGGCCGCAGCGGCGGTGGACGGGAGCACGGGTCGCGTCGATCCGGGCTCCTTCCTGTCCGCCTCGGCATCCCTGTCAGCAACATTTCTCGATGCCGATTATTTCACTGAGGGGCGCGAATGTGTTAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAACTACTCATTTAATGTGGCCGGTGGCGGTGGCCGTAGTAAGGCCAGCACGAGCGCCGCCAGCTCGCAGGCCTCCGGCTCCTGTCCAGCCTCGGGTGCGACCTcggcatcggcggcggcggcggccgcgtcgggaacgggaacgggagcgaCTGCAGCCACGACGCTCGACGAGCATGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCACGAAGCGAGCCGGGCTGTCCTGCTCCAACTGCCTCACCACCTACACGTCGCTGTGGCGACGCAATCCCGCCGGGGAGCCCGTGTGCAATGCCTGCGGCCTGTACTTCAAGCTGCACAGCGTGGCCAGGCCTCTCACCATGAAGAAGGACACCATACAGAAACGCAAGCGTAAGCCAAAGGGCACCAAGGGCGaaaagtccaagtccaagatgAAGAGCGCCCTCATCTCGACGCTGGAGAGTGGCTCCTTGACGGCCAATTGCCAAATTGTTGGCCTGGGCATGGAGAGCGGCCAGATGGACGTGAATGATGATATGAAACCACAGATCGAAATGAAACCATACATGCCATACtcatcgcagcagcagcagcaacatcagcagcagcagcaacagcagcagcagctgctcgctGACCAGCACTCATCGGCGGCCAGCTCGCCCCATAGCATGGCATCCTCCTCATTATCGCCCTCAGCCACATCACATCAGGCGCACTcgctccagcaccagcagcagctctgcTCCGGGCTGGACATGTCGCCCAATTCGTCCTACCAAATGTCACCCATcaacatgcagcagcagcagcaccatcatcagcagcagcaatcctGCAGCATGCAGCACTCGCCCGGCACGCCCACTTCCATCTACAACACATCCTCGCCCACACACCACCttcacaataacaacaataacacgctcttcaacaacaacaacaacaacacccaTAGTAGCAATgagaataacaacaaacttATACAGAAATATCTGCAAGCCCAGCAACTGGgcagcgggaacgggagcgggagcagcgaCCATCAGCTGTTGGCGCAACTCATGCCAAGCTCGAttacggcggcggcagcagctgcggcagcggcagcggcggcgatcAACACGATCAAGTCGGAGGCCTTGTCGCTCACCTCGCAGGCGGCGTCATCCACGGTGGCGTCGGCGGCGTCAGTGGCCACATCAACACCGACCACGGCATCGAGCACATTATCCTCGCTGAGcctcaacaacagcagcaacagcattaTTAGCCTGCAGAATCCCTATCACCAGCTGGGACTTGGCCAGGCTGCGATGCCGTTGTGCAAGCCGGGCCGTGCCTCACCGCCCTACTACCTTACGACGGAGGAGGACGAGCAGCCAGCTCTCATCAAGCTGGAGCAGAttgatcagcagcagcagcagcagcaccaccatcagcaccaccatcagcaacagcagcagcagcagcatggaGGGCTAATGCTCAGCCGATCGACCTCGCTGGACGAGCACTACGAGCTGGCCGCCTtccagaggcagcagcagcagcagcagcacctccaacagcagcagatggGACACCACGATCAGCACTTGGCCGCCACCAACTACGCCATGCACgctgcacagcagcagctgcaggagatgGAGCGCAAGTTCGGCGTGGAGCGGGAAACGGTGGTCAAGATGGAGTAG
Protein Sequence
MTKTSKPKDKGPKAGGNLLKKAADMKILTAKSNNNSKQQQQQAKQQGRTTAVTATAAGSTASAKETAPAIATEPQPEAATQAEAAQAEPATTTTATANLSLLDARSQAHTSVVSETPKQSVNTTATAPSESVPAINDDRTDKPDLYALAASHHLFGHFSHYPSSHPPAQLYEHYASTDPIMRNNFALYSFYGGGGGGGGGGGGVSDPSHEQLPHHVVAAAQAAAVAAAAAHSSTPNIDEVIQDTLKDECFDDGHSSNYHVLTSVSDLHTLKEASPVPGIAYALTNDQILQQQQHQQLHHHHHQQQQQQHQQQQQLFHQQQQHQHQHNNSASSVGGDSPSSSHALSSLQSFTQLTSATHRDSLSPAEHGGYFGATQLSPSLQNSSVYAGPLLTQAANGMQYGMQSPNHTHAHLQQQQHHQQHHQQQQQQQHHHHQHHHNSSSSSPGPVGLLHSSSSAATAAAVAAATAAVNGHNSSLEDGYGSPRSSHSGGGGGGSGNGGGGTLPGFQRIVPGSSGYGSSVANGPVSGADRYAPLANYRGQNEAWYEPLSYTQAAGQAQLGVGAGVVTNVIRNGRAISAANAAAAAAVDGSTGRVDPGSFLSASASLSATFLDADYFTEGRECVNCVAAESGGDFYKNYSFNVAGGGGRSKASTSAASSQASGSCPASGATSASAAAAAASGTGTGATAATTLDEHVSRANSRRLSATKRAGLSCSNCLTTYTSLWRRNPAGEPVCNACGLYFKLHSVARPLTMKKDTIQKRKRKPKGTKGEKSKSKMKSALISTLESGSLTANCQIVGLGMESGQMDVNDDMKPQIEMKPYMPYSSQQQQQHQQQQQQQQQLLADQHSSAASSPHSMASSSLSPSATSHQAHSLQHQQQLCSGLDMSPNSSYQMSPINMQQQQHHHQQQQSCSMQHSPGTPTSIYNTSSPTHHLHNNNNNTLFNNNNNNTHSSNENNNKLIQKYLQAQQLGSGNGSGSSDHQLLAQLMPSSITAAAAAAAAAAAAINTIKSEALSLTSQAASSTVASAASVATSTPTTASSTLSSLSLNNSSNSIISLQNPYHQLGLGQAAMPLCKPGRASPPYYLTTEEDEQPALIKLEQIDQQQQQQHHHQHHHQQQQQQQHGGLMLSRSTSLDEHYELAAFQRQQQQQQHLQQQQMGHHDQHLAATNYAMHAAQQQLQEMERKFGVERETVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480540;
90% Identity
-
80% Identity
-