Basic Information

Gene Symbol
Znf131
Assembly
GCA_008042775.1
Location
VNKC01000448.1:235117-251214[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.093 6.5 7.3 2.3 3 23 287 309 285 309 0.92
2 13 2.3 1.6e+02 2.9 1.8 3 21 451 469 449 473 0.90
3 13 0.096 6.7 7.2 0.1 2 21 495 514 494 517 0.87
4 13 1.2 86 3.7 3.3 1 23 534 557 534 558 0.94
5 13 0.36 26 5.4 0.2 1 21 562 582 562 586 0.91
6 13 0.0029 0.2 12.0 0.0 2 23 630 652 629 652 0.92
7 13 0.14 9.6 6.7 0.2 1 21 657 677 657 678 0.94
8 13 0.00077 0.054 13.8 4.3 2 23 737 757 736 757 0.97
9 13 3.2e-05 0.0022 18.2 2.4 1 23 763 786 763 786 0.97
10 13 0.00013 0.0091 16.2 1.7 1 23 810 832 810 832 0.98
11 13 0.11 7.7 7.0 3.8 1 23 869 894 869 894 0.96
12 13 0.0045 0.32 11.4 4.5 1 23 905 927 905 927 0.97
13 13 0.00079 0.055 13.8 3.1 1 20 933 952 933 954 0.95

Sequence Information

Coding Sequence
ATGAACGTGGAAGACCTGGAGGACACCCACCTGTGCATTAAGTGCAATGCCACGATCCTTGGACTCACCAAGTACATTGAGCACCGGAAGCGAAATTGCCTGATGACGGTGAAGCCAGGGGGAACGCCAGCAACAGATGGATCTGCCACCACTTCTACTCCCACTCCAGTGGTGGCGCAGACGATCATCCCAAGCAGCAATCATCTGGACCACACCTATGATGGCTTCCACTTCGCAGAGCCGGAGGCCCCAAGTAGCTATCTCCGGAAAACAGCAGCTAGTCATGGGGGCAAGGCCTCCAAGTCGCTAACCGAGGCCTATGATCTGCCCTATGAGTTGGGAGCTGACCTGTTTTTCTCCTCGCTGCAGTTGCAAAGTGTTTCCACTGGGGGCAAGACCGGATCGGTGGCTCGCCAGGATAGAGCCAAGGAGGAGTCCTGGACAGCCCCTAGGGGGGATCCTCTCTTGAAAGCTGTGAGGGAACACGATGAGGCGGTGTTCAAGCCCCTCAACTTTGACCACGACTCCCCGGAGGCGAGTGAGGAAGAGGAGGATGATGAGGAAGCCGATGACTTTGACGCAgaagaggatgaggaggagtaCGATGTAAGGCGTCACTCCCCGCCCGCAGTGCCCGCCACCCACACTGGCGGCAAGTGGAAGCCCGAGCACCGCCCCCAGCTCCAGCATCCGCATATCGAAAGAATATCGCCCAGTTGGGATGAGCCGCCCGAGGAGGCGTACACCCACCCTCCGGCGGATCACACCAAGGGCAAGTGGGTGCCCGGAAGCAAGCAGCTGGAATATCGGGGAAACATAGATCTCACCAAGCTGGAGCACCCGGGGGCCAGCTACTGGTGCAACATCTGCTGCCGGCGGCTCAAAAGTCAGTCCAACTACGAGCAGCACTTGAGGAGTGGCTACCACCTGAAAAGGGCTGATGCGGAGTGTCAACTGGAGCAGGCCACTCTCGGGGAAGAGCTCAGCCTGAGCAAGGACTTTGCCGTGGCGACTGGGGAGAAGCAGGAGGAGTTGCAGTCGCATCCCTCCAAGAGACAGCGGAGAGCGAGTCTCCTGCGATGCGATctctgccgccgccggatGGCCAGGCATTTGATGGGCAAGCACCTGATATCCCACTATCACTACCGACgtctgcagcagcagagtcCGCTCAAGAGGCAGTTGTCCCTGCAGCACATACTCGGCCACATGGGCAGCATTGTGAGGCAGTCGCCGTTCCAGTGCCTGCCCTGCCGCTTTTACGCCAACACAGAGGATGCCTTCCTGCATCACTGGCAGTCCCAGGAGCACTTGGACCTGACTCAACGTCTGGGTGGATCATTTTGGTGTGGCTACTGCCAGTTTGAGTGCAGTTCCAATGAGTCCATGTGGCTTCACCTGCTGCACGCCTCTCACAAAGATGTGCTCCTAGTGCTGAATCGCTCGGTGCCCATATGTATAGCCCAGAGGCGACATATCCAGTGCCCGTATTGTGGGCTGAGTGTGCTGTACAACTTCGAACTTCGCCGGCACTTCGCTGCCGATCATCCCGGCGTGGCCCCGGCTGGAACCGCAGCCGACGAGTATCAGTGCAGGTTTCGGTGTGGCTTGTGTGGAACACCACAGAAATCCCGGTTGGCCCTGCAGCGCCATGAGAAGCATAAGCACCACTTGGCCAGGTATTACTGTGCCATCTGTCGCCTGGACTTTGATACACCCCTGCAGGCGCGTCGTCACCGGAGCTTGGTGCAACATAAGCAAAAAGCCCGAGCCAAGGCGTCGTCCACCTCCCTACCGGACAAGGAAATAGAGCACATGCTCAGGGAAGTGCTGGAAGAACCGACCCATAATCCGCCTGCCAAAAGAAGTAAATCAGCCGAAAAGAAATGCTCAGGTTGTCCGGAGGTCTTCGACTCGCCACAAGGACTGGCCCAACATCGAGCTGAAGTGCATCCGGCCGACAACCATGTGTGTCTGAGCTGCGGATCGAGCTTCCAATCCGCTCAGGCACTGGGCAGGCACACCCGCAGCTGTCAGCCCCTGGCCAGCACCTCAGAAGCCTCCCATCAATCGGCGACCAAGagcgcctccgcctccgcctacTCCTGTGACAAGTGCAGATTCCAGTCGCAATACGAGTCCGATTTTATTTACCATCGCTTCTTTCACACGCGACCGGGAACCATTGGGAGAGACGAGTTGCTGCAGTGCCCGCTGTGTCCCAAGCACTTCAAGAAGCACTCCCTCAGAGCCCATCTCAGAAACCACACAAATGAGAAGATCTTCGAGTGCTCGGAGTGCCGCCAGAAGTTCGCCAGGAGACACAACCTCAAGAATCACGTAGCCACCATGCACGGTGAGCGGAAAGAGAAGGTCCAGGCTAAAGATGTTTCCACAAAAGTTGTCGGGGCAACAAAGCCGAAGTACCAGTGCGGGACCTGTGGCAAAGTACTGTCCAAAAAGCATTCCCTTAAACTGCACGAGCTGAGTCACACTGAGGCAGTAGAGCGACGCTTTCGCTGCCATTTTCCGGACTGTTCGTATGCGGGTTTATGCCAAGAAAACCTCAAGACCCACCTCATCTCGCACTCCCAGGGTAGGCACAAGTGCGAACGGGAAAACTGCAGATATGTGGGAAAAAGTAGCCTACATCTGAAGAGGCACCTCAAGTCGGCCCATCCCCGGGAGGAGGACGGTGCAACGGAGTGGTTCTCATGCGATCAGTGCGAGTTCAGGACCCGCACCAAGGGCCACCTCCGCCGGCACTCGCTGCGCCACTCGGGGCAGAAGCCCCACCAGTGCCCCCACTGCGACTTCCAGTGCAGCACCATCGACAATCTGCGCAAGCATATAGTCAAGACGGGCAAGCATCCCGGCAAATTCATCTACGAGTGCGGAAAGTGTTCTGATCAGGCGCCAAATGAGATCTTCAAGAGTAACACGTTCAAGGAATACCAGAAGCATCTGGAAACTCACAAAGCGGATTAA
Protein Sequence
MNVEDLEDTHLCIKCNATILGLTKYIEHRKRNCLMTVKPGGTPATDGSATTSTPTPVVAQTIIPSSNHLDHTYDGFHFAEPEAPSSYLRKTAASHGGKASKSLTEAYDLPYELGADLFFSSLQLQSVSTGGKTGSVARQDRAKEESWTAPRGDPLLKAVREHDEAVFKPLNFDHDSPEASEEEEDDEEADDFDAEEDEEEYDVRRHSPPAVPATHTGGKWKPEHRPQLQHPHIERISPSWDEPPEEAYTHPPADHTKGKWVPGSKQLEYRGNIDLTKLEHPGASYWCNICCRRLKSQSNYEQHLRSGYHLKRADAECQLEQATLGEELSLSKDFAVATGEKQEELQSHPSKRQRRASLLRCDLCRRRMARHLMGKHLISHYHYRRLQQQSPLKRQLSLQHILGHMGSIVRQSPFQCLPCRFYANTEDAFLHHWQSQEHLDLTQRLGGSFWCGYCQFECSSNESMWLHLLHASHKDVLLVLNRSVPICIAQRRHIQCPYCGLSVLYNFELRRHFAADHPGVAPAGTAADEYQCRFRCGLCGTPQKSRLALQRHEKHKHHLARYYCAICRLDFDTPLQARRHRSLVQHKQKARAKASSTSLPDKEIEHMLREVLEEPTHNPPAKRSKSAEKKCSGCPEVFDSPQGLAQHRAEVHPADNHVCLSCGSSFQSAQALGRHTRSCQPLASTSEASHQSATKSASASAYSCDKCRFQSQYESDFIYHRFFHTRPGTIGRDELLQCPLCPKHFKKHSLRAHLRNHTNEKIFECSECRQKFARRHNLKNHVATMHGERKEKVQAKDVSTKVVGATKPKYQCGTCGKVLSKKHSLKLHELSHTEAVERRFRCHFPDCSYAGLCQENLKTHLISHSQGRHKCERENCRYVGKSSLHLKRHLKSAHPREEDGATEWFSCDQCEFRTRTKGHLRRHSLRHSGQKPHQCPHCDFQCSTIDNLRKHIVKTGKHPGKFIYECGKCSDQAPNEIFKSNTFKEYQKHLETHKAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00485492;
90% Identity
iTF_00483312;
80% Identity
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