Basic Information

Insect: Drosophila pectinifera
Gene Symbol: -
Assembly: GCA_008042775.1
Location: VNKC01001577.1:87113-92721[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0013 0.09 13.1 1.2 1 23 154 176 154 176 0.97

2 14 8.3e-05 0.0059 16.8 1.7 1 23 399 421 399 421 0.98

3 14 2.7 1.9e+02 2.6 2.8 1 23 427 450 427 451 0.92

4 14 0.54 38 4.8 4.7 1 23 471 493 471 494 0.94

5 14 0.009 0.63 10.4 1.9 3 23 765 785 764 785 0.91

6 14 0.019 1.3 9.4 1.9 1 23 791 814 791 814 0.98

7 14 1.3 88 3.7 1.3 3 23 852 872 850 873 0.92

8 14 0.00081 0.057 13.7 0.7 1 23 894 917 894 917 0.97

9 14 0.00076 0.053 13.8 0.3 1 23 1108 1131 1108 1131 0.94

10 14 0.016 1.1 9.7 5.0 1 23 1143 1165 1143 1165 0.98

11 14 7.6e-06 0.00054 20.1 0.6 2 23 1171 1193 1170 1193 0.95

12 14 0.0029 0.2 12.0 1.5 3 23 1202 1225 1201 1225 0.88

13 14 0.00064 0.045 14.1 2.1 1 23 1231 1253 1231 1253 0.96

14 14 0.0018 0.13 12.6 0.3 1 23 1259 1282 1259 1282 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0013	0.09	13.1	1.2	1	23	154	176	154	176	0.97
2	14	8.3e-05	0.0059	16.8	1.7	1	23	399	421	399	421	0.98
3	14	2.7	1.9e+02	2.6	2.8	1	23	427	450	427	451	0.92
4	14	0.54	38	4.8	4.7	1	23	471	493	471	494	0.94
5	14	0.009	0.63	10.4	1.9	3	23	765	785	764	785	0.91
6	14	0.019	1.3	9.4	1.9	1	23	791	814	791	814	0.98
7	14	1.3	88	3.7	1.3	3	23	852	872	850	873	0.92
8	14	0.00081	0.057	13.7	0.7	1	23	894	917	894	917	0.97
9	14	0.00076	0.053	13.8	0.3	1	23	1108	1131	1108	1131	0.94
10	14	0.016	1.1	9.7	5.0	1	23	1143	1165	1143	1165	0.98
11	14	7.6e-06	0.00054	20.1	0.6	2	23	1171	1193	1170	1193	0.95
12	14	0.0029	0.2	12.0	1.5	3	23	1202	1225	1201	1225	0.88
13	14	0.00064	0.045	14.1	2.1	1	23	1231	1253	1231	1253	0.96
14	14	0.0018	0.13	12.6	0.3	1	23	1259	1282	1259	1282	0.97

Sequence Information

Coding Sequence: ATGGCATTGAACAGACGGAATAACCCGCACCCAGACGCGCTCGCGGGCGCCGAGGAGGTGAACTACAAGTTTGCGTGTCGCTGCTGCCTGAAGGCGGACGCGGAGTTCGTCAAGCTGGAATCGGTGTCAGTGGCGCGCAGCCTGGACGCCGTTAGCGAGGAGGATCAGATATCGCTCCTTCGCTGCCTCCTCTTCTGCGTGCGTGCGGAGAATGCGCCGGAGCTGCCGCAGTACATCTGCCTCGAGTGCAGCAAGAGCTTGCAGGTCGCCTACTACTTTCTGCAGAATGCAATGCGGGCCCACGAGATCCTTTGCCGCAAGTTGTGTCCTGTCAAGTCGAGCGCGGACGGCAAGCGCTTCAATGGTTCTATAAACCAGAGGTTTCAGCAATCATCATCACATAAGGAATCTGCGACGGCGACGTTGGGGGACAGGACGAGGCCTTCAAAGAGCATAAAGCATGAGTGCCAGGTGTGCGGCGAGGTCGTCCACACTCGCATGGAGCTGAGACTGCACATCCGCCAGCACGCAGAGGGAATCTCCTACAACTGCAAGATGTGCAACTTTACCACGCTCAAGcagcgccagctgctgcaACACTATCGCTGCGATCACGCCATGACCCCCAATCAGGCGGAGGAACACGTTAAAGCGAGTCCACTGCCGGTATCACCGCTTAAGGAGGATGAGGTTAAGACGGTGTGCACCCTGGAGGACATGGAGCTGCTTATACCCACGGTGCTCACGCCTGACGACTACGTTCACCCCACGATTGATACGGATCAGCTGCGCGACATCGAACAGCACCTGGCCGCCAGCATGGGCGAGACGATGACCAGAGTGGACACCCTCACATCCACATTGCCGCCCATGGACACGGCGCACAATGTGAGCATCGGCACGGAGTATCTGGTTCTACCCGATGGCTCGCTGCAACAGGTCAGCGGAGGCGGCGTGGTCATTGAGTACATTGACGACAGCAAGCCGAAGCCGCCGCCACCGACCAATTCTACCCATGTCAACATCAGCCTACAAAATCTCCTCGCCGACCCAGACGAAAGCGAGGCAATGGATATCGATGTCAACGAGCTTATCGTCGAGGATATCTTGACGACACATAAACCTACCAtctccgctccagctccacttCCAGCCAGACCAAAGTCAACCGTTGGCGGATCCCCAACTTACAAGCACAAGTGCAGTATATGCCCTAGAATGTTTTCATCTGTGGCTCGTCTGAAATCTCACCAGTTAACCCACAGCAATTTGCCCAAGTTTTTCTGTGACCAATGCGACTTCTACTCGCTGCGCAGCGTCGATCTCATCCAGCACTACAAGACTACGCACCACCGAGCGGATGAAAACGGTATAACCAGCAAGGACGCGACGCCGGAGGAGCCGGGCGTCTACTCGTGCGACATGTGCCTCTTCGAGACGCGCTCCTGCAGCCAGCTGCGCGTCCACTACACAGAGCATCACGAGGTTCAGCCCACGGAGGTGCAGCTGCGTCCCAGCTGGACCAACAGTAGTGGGGAGGACTCTAACAACAAGGAGCAGCGGTCATCAGTCAGGCAACAAGATCACGTCGACCTCCCGGTGGCCATTAAATATCCGCCACCAGTTGCGGATACACAGGTGgaagttcaagttcaattgcaagtgcagcagcagcagccatcaACAACCATCACACAAGATGGTGACAACATAAACGTGGTAGTGGATGCCACGCCGCTCTTCTATGCGGCCACCTCATCCTCTTCCGTGCCTGTGGCAGTGCAGCCAGTGCCAGCGGTGCAGGCGATGCCAGCGCTTCCGGTGACTTCTAAGGCGGATCCCACTGACGAAAATCACAGCAATGCATTCGAAATCTTTCCGGAAATCTCACAAAGCAATCAGCAAGCGACCGAACCCGTTACCGTTCAGCCAATTCCGGCAAACACATCAAATATCTCGATGTTTGGCGACATGCAGGATTTCATAGATAACACCGATGTGGCTGCCATATGCACGATACCAGCGGATGATATGCCCGTGGTGGATGGCGATGATATTGTGATcgataataacaatattagcCTGGATTTTGATGCGGAGAATCTGTTTGAGGAattcgaggaggaggacgaggcggtgggcgaagaggaggaggaggaggatgaggcgGAAAATGAGGACGAGAATGACAACAATGATGCAGCCACAGATCAAAATCTGCTGCTAACCagcgacgatgatgatgtggACGACTTTGATGATGAGCAATCGAAGCATCTGCAGAAGCCCTACTGCATTTATTGCAACAAGAAGTACACCAGCCAATACAAGTTCGAGAACCACATGTTCCTTCATCGGGGTCTGGCTCCCTATCGCTGCGAGCTGTGCACCAACCTCTACAACAAGAAGCGCCTGCTGATCAGGCACTACAAGACCGTGCACAAGCGAATGCCCACAAGGGACATGGTCCAGGCCAAGGGCGATAAGGTATTGGTGGCCCGAAGCAATATTGAGAAACTCTATCTGGATGCGATAAAGAGTCCAATGGTCATGTGCGCCAAATGTCCGTTTGAGTGCGAGTCGGATGCAGATATGCGAAAGCATCTGAATGCCCACCACGGCATTAATGATGGATTGTCCGCTCATGCCAATGAGGTCTTCATCATACGTAAATTGCCGTTCGAATGCCCACGCTGCATTCGATCTTTTGCGGCCAAGAGCACGCTCACTCGCCATCTGCAGCGCAGCCATTTGGTGGACACAATTATTGAGATGCAAATGCCGCATTCGTCggcggccaccaccaccatcacaacaacaacttcCACGTGCACGTCCACGGCCACAGTATCCGAGCCAGCAGGAGATAACGAACCTGCTAATGTGATGACGACCACGGCTGCTGCAGGCAATGCAGAGCTGGGAGCAGAGCAAGATGATGGAACTATCGCGCTAGTAAGAAGGGGGCGCGCCGTGCCAGAAGAGGACGTGGATCCGGTAACATTGGACGCAGCCACTGCGGCGACAACAGCTGCCATAGCAGCAGCTATATCATCGGCGTCCGCATCACCCACCGCAGCAACAGCCTTAGCGCCGTCTACATCCAACCTGTATCCCACTCCCACACCGTTTGATTTCGAGTACGACCTTATGAGCGATGCGCAGCGATCCCAGGTCTCTACACCCATCTCTAATCCCCAGTTCGGATCGCCTAGCTGCGGCCTGCTGAATGGCAGCGACAAGCTACTGACCACCGCCGCCATGCCGCCATTGCCTTCGAAGGGACTGCGCTCCAACAAACGGCTGCCCCATACTTCGATCTACGTTTGCAAGCTGTGCAACAAGTCCTTCGACGAGCTGGGCAAGCTGGTCAAGCACGAGATGGAGTTGCACTCGAATACGGAGCCGTCGCGATGGGGCTACCAGCACAAGTGCTCAATCTGTAGTACCAGCTACCGCACGTTGACGCTGCTCAAGTTCCACATGAAGCGGCACGTTAATCGGAAGTTGCAATGCAAGCTGTGCCCTAAAACCTTCGCGACCAGCACGGAGCTAGATAGGCACATGAAGGCCAAGCATTGCAGGGAGAAGACCGTCGGGCCATGTGCGTTGGATGGCTGCGGGAAGATGTTTGCCTTCAAGCACCACATGGTGCGGCATCAGAAAGCCTCCCATTCTAACAAGTCTACCCATATTTGCGCTGTTTGCAACAAGGAGCTTCGGACCGTGGGGCATCTGCAAAAACACATGAAGTTGCACAAGGGCATGGTATCTTACAAATGTCCCGAGTGCGACCGCCCATATTTGCGGCGCGGAAGaCTGCAGAGCCATCTTCTGAAGATCCACAAGAAACGCCTAACAGACGAAGAGATGGCTGCCATCTTCCGCGACATAAAAGTCTCTACCAACCCACATGAGCTGAAGGTGATGACCCGTAAGGGGCAATTGGGGCGCCCCAGAAAGGTCTTAGTCGATGAAACGGAAAACAGGGAAGAGACGCATCTGAATGCGGTAGCGtcagcgacagcggcaacggcggaGACGGCTGCAGATGTGTCGAAATAG
Protein Sequence: MALNRRNNPHPDALAGAEEVNYKFACRCCLKADAEFVKLESVSVARSLDAVSEEDQISLLRCLLFCVRAENAPELPQYICLECSKSLQVAYYFLQNAMRAHEILCRKLCPVKSSADGKRFNGSINQRFQQSSSHKESATATLGDRTRPSKSIKHECQVCGEVVHTRMELRLHIRQHAEGISYNCKMCNFTTLKQRQLLQHYRCDHAMTPNQAEEHVKASPLPVSPLKEDEVKTVCTLEDMELLIPTVLTPDDYVHPTIDTDQLRDIEQHLAASMGETMTRVDTLTSTLPPMDTAHNVSIGTEYLVLPDGSLQQVSGGGVVIEYIDDSKPKPPPPTNSTHVNISLQNLLADPDESEAMDIDVNELIVEDILTTHKPTISAPAPLPARPKSTVGGSPTYKHKCSICPRMFSSVARLKSHQLTHSNLPKFFCDQCDFYSLRSVDLIQHYKTTHHRADENGITSKDATPEEPGVYSCDMCLFETRSCSQLRVHYTEHHEVQPTEVQLRPSWTNSSGEDSNNKEQRSSVRQQDHVDLPVAIKYPPPVADTQVEVQVQLQVQQQQPSTTITQDGDNINVVVDATPLFYAATSSSSVPVAVQPVPAVQAMPALPVTSKADPTDENHSNAFEIFPEISQSNQQATEPVTVQPIPANTSNISMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEEFEEEDEAVGEEEEEEDEAENEDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKYTSQYKFENHMFLHRGLAPYRCELCTNLYNKKRLLIRHYKTVHKRMPTRDMVQAKGDKVLVARSNIEKLYLDAIKSPMVMCAKCPFECESDADMRKHLNAHHGINDGLSAHANEVFIIRKLPFECPRCIRSFAAKSTLTRHLQRSHLVDTIIEMQMPHSSAATTTITTTTSTCTSTATVSEPAGDNEPANVMTTTAAAGNAELGAEQDDGTIALVRRGRAVPEEDVDPVTLDAATAATTAAIAAAISSASASPTAATALAPSTSNLYPTPTPFDFEYDLMSDAQRSQVSTPISNPQFGSPSCGLLNGSDKLLTTAAMPPLPSKGLRSNKRLPHTSIYVCKLCNKSFDELGKLVKHEMELHSNTEPSRWGYQHKCSICSTSYRTLTLLKFHMKRHVNRKLQCKLCPKTFATSTELDRHMKAKHCREKTVGPCALDGCGKMFAFKHHMVRHQKASHSNKSTHICAVCNKELRTVGHLQKHMKLHKGMVSYKCPECDRPYLRRGRLQSHLLKIHKKRLTDEEMAAIFRDIKVSTNPHELKVMTRKGQLGRPRKVLVDETENREETHLNAVASATAATAETAADVSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00609392;
90% Identity: -
80% Identity: -