Basic Information

Gene Symbol
hang
Assembly
GCA_008042775.1
Location
VNKC01002013.1:16200-27185[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.23 16 6.0 1.0 3 23 325 346 324 346 0.93
2 18 0.3 21 5.7 3.2 3 22 454 473 452 473 0.89
3 18 0.0005 0.035 14.4 3.3 1 22 591 612 591 614 0.90
4 18 5 3.5e+02 1.8 0.0 2 21 626 645 625 646 0.91
5 18 0.00058 0.041 14.2 0.2 2 23 779 801 778 801 0.95
6 18 0.0017 0.12 12.7 0.1 1 23 809 832 809 832 0.96
7 18 1.4e-05 0.00096 19.3 0.1 2 23 918 939 917 939 0.97
8 18 0.00024 0.017 15.4 2.9 2 23 1025 1047 1024 1047 0.97
9 18 0.019 1.3 9.4 0.2 2 23 1056 1078 1055 1078 0.95
10 18 0.0032 0.22 11.9 0.1 1 23 1091 1114 1091 1114 0.97
11 18 0.00011 0.0074 16.5 1.1 1 23 1180 1202 1180 1202 0.99
12 18 0.0016 0.11 12.8 0.9 1 23 1210 1233 1210 1233 0.96
13 18 0.64 45 4.6 0.3 2 19 1241 1258 1241 1259 0.93
14 18 2.7e-05 0.0019 18.4 1.4 3 23 1351 1371 1350 1371 0.98
15 18 0.0042 0.3 11.5 0.1 1 23 1406 1428 1406 1428 0.97
16 18 0.0005 0.035 14.4 0.6 2 23 1513 1535 1512 1535 0.93
17 18 0.46 32 5.1 0.1 2 20 1555 1573 1554 1575 0.91
18 18 0.0055 0.39 11.1 0.4 3 23 1590 1610 1590 1610 0.98

Sequence Information

Coding Sequence
atgggaatgggcttgggcctgggcctgggcctgagcctgggcatgggcatgggaaGCGGGAAGAGGACAGAGGCCAGCGGGAACGGACGGCGGACAGCGGGAACGGGACGGAGACCCTGGTCAGGCACAAAATTCAAGTGGTTTCACCTTGGGCACCAGATTACCTGGCCTGGTCTGTTGGGATGTCGATATTTCTACTTCGGCTTTAGCTTCTTCGGCCTCTCCTTGTGCATCATCTTCgcttggccatggccacggCTGGGCTCCTCCTGCGACCCGCATCGAATTTCATCCACCGCCTCCAGTCTCGAGTCTCCATTTTGTGGCACTCTTGGGTCGGGCTTGgtttcggtctcggtctcgggctcgggctcgggtcCCCAGATCACCTCGCAGGATCGACTGTCGCTGCATATATGCCACGCCTGCATCAGTTACCTGAACTCGTGGCAGAGTTTCAAGAACCGCTGCCTCAGTTCACAGACAAAGCAGCGCCAGTGGCTGGACaccaacaacaagagcaagcTCTTCAACTATCTGGACCTGAACAGTGCCGAGAACGGAGGAGCCTCTTCCgatcaccaccagcagcatcaacCGCAATCGGAGAATGAGCTCGACGCGGAGAAGGCGACGGCAACGGCCACAACGGCAGCCAATATATTGGATGGCATACCCTCGCTGAAGAAACGCAAATCCCTAACAGTCTATCCGCTGCCAGCGTTGCCTATCAAAGATGAGCCCATTGACACGGATGATGACTACCAGATGAAGTCGATAGACGAGTCAGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATATGCCGTTTATGGCTTCGGACTACGACTACACGGCCCAGCATGGTGTTAATGCCCATTCCGTTGCTGCCGGACTGCCGCCGAATGCGGTGGCCAATGTGGCCGCCGCCGGGGATTCCAAGGTGGCCAGCTGCCGGGCCTGCAGCTTGCAGTTCTCCACACGAGCGAATGCCCGCCGGCATGAGCGCAATCTGCACCCGAACCTGTTCCAGCTCTCTACAGACTCGCCGCACAACACGCCAATTACGAAGCCGACTCCAGCGTTGGCCGCCGCATTGGAAATCCAgcgggcggcagcagcagcggccaccGCGGAGGCGAACCGTGCAGCGGGCGCTGCCGGCGGAAATATCTCTACCCAAAAATACCGTCAGGTGGTGATGAACGCGTTCATTAAGTGCGAGGGCGGTGGCTACGACTACGACAACCCGGAGCAGTACCGGCCACTGCTCAGCCACGACAAGGTGGAGTTCATCGAGCAGAACGAGGAGTTCCTGGAGCAGTACCAGACGATgacctgccgctgctgcaacaAGTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCGCATCTCAAGAAGCGGAACTGCATAAATCTCTACAGGGTTTTGAGTACACTGCGCGGTAAGATACCAATGCTACCTATCTCTGTcacggatgtggatgcggcAGCGGGAGAAGATGGAGTCACAGCTGTAGCTTTAGCGGTTGCCGACGCTGGAGCAGGAGTTGTCGCGATGGCCAGTCCGTCAGTGACCGTTAGCGGGGAGGTCATCGGCACTCCCGGCGCTGGCTCCGAACGCCCAGAGAAGCTGCGCGCCAAGGAACTCCTGGTGAACAAGCTATATGAATGCAAGCTCTGTCCAAAGGGATTTCGTACCAAGCATGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGTAGCTTCTGCGGCCTGGACATTGCTGATCCGGTGGACAGGCGGCGGCACTACAACAACATGGATTGCATTGTGCGGCTGCGCTGCATGACGTGCGATGCCAAGCTGGAGACGCATCAGCGCTTCCTCGATCACGTCTACCAGGATCATCTTGGCGGcgtgggcggcggtggtggcggtgccAGCAGTGATAACGCCTCTACGACGGGCAGCGGCCTGGCTAGAAGCAACAGTATGGAGCACTCACCGGGCAAGAGGAGTCTGCTCGGTGCCCTGGGCATTGGCGTTGGATCATCGACCGAGGAGtcgcgcagcagcagcgtggcGCCAACACTTACATCCACACCCAAGCCTGCGGGTGGCGGAGGCACCGCTGCAACCTCTGCTTCCGCGCCCAGTTCAGCCAATCGTGATGCGGCCGCACCCAAGTCCCAGTACTTTTCGCGAATGCCGCAGGTGTGTCCCATTTGCGGACAGCAGTACAATAACTACAACAACGTGCTGCGCCACATGGAATCGAAGCATCCGAACAAACTGCCCGAAACGTACAAGTGCGTGCGCTGTGGACTGGGTTATCCACGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAACCGGCACTCGGGCGGCTTCGAGTACATCGTGAATGCCGATGCCGTGAAGCTGGCGGACGGAAGCACGCCGAATGTCTACACGGGTCGCTACGACTACGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACCCTCGATGAAGACGATGAGGAGCCGAGCAGTGTGGCGAAGAAGATGCGCCTGGatgacagcagcaacaacagcagcttggtgggcgtggccagccaGCAACAGAAGGAGTGCCCCATCTGCAATGCGGTGTTCAGCAACAACATTGGCCTGTCCAATCACATGCGCTCCCATTACACAGCCTCCAATGCGGTGAACGCAGCTTTGGCCGCCGCCAATCGAATGACACCCAAATCGCTGACCATCACAGCAACTCCGGCCGCGGATGCGAGTCCAGAGGCGACAGGCGTACTATCTGCATCGATTGCATCTGCCCCTGCGACGCCCAGCAGCAATGTGCCGCCGGCGATGGCCAATCAAACGCCCCAGGAGCAGGCCGTATTCCGACGCAGTCTGGACCAGGCGGCTGACCGTCGCTTCCGGCGAATGCGATGCCGGATTTGCCAGCGCCGTTTCAGCTCAAAGAAGTCCTATCGCTACCACATGCTGACGGACCATCAGGTCCAGAACGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTCGCCTACGAGAAGGGTCTGAAGGTGCATCTGTTCAAGGTGCACGGTCGAGCGATCAAGGATGAGATGATCATCAAGCAGTTCGAGTGTGAGGTCTGCTCGATTGTATACagctcggagctggagctgcagcagcacaagcGCAACGTCCACAAGCTGACCTCTGTCTCTGCATCTGCCTCCGCTTCTGCATCAGCGTCCGCGTCCACTTCCTCGAAGATGGAGGACGACTCCCTGATGGATGAAGGCAAGGCAACAGGCGGCGAGCATGCCGATTTGTCCACCCTTTCCGCCAACGCGTCCAGTGCTTCCGCTGCGGGCCTGGGAGTGGGCACGCCGCTGTACTGGTACCAGTGCAAGTACTGCCCGTCCAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTTGACTCGAATGATTACTCCTGCAAAGATTGCGGCAACGTCTATAGCGGACGAAAGAGTTTATGGGTGCACCGATACAAGAAGCATCCCCAGGTACCCGATCCAGCCGAGTGCTCGCTGTGCCGCAAGATCTTCTTCGATCGCCAGATGCTGGACAACCATACACCCACCTGCAACCGCAAGCCGATCACTTCGACGGgtgcccaccagcagcaggagacgcagctacagcaacagcaggcggcGCTCCAACGAGCCGTTTTTAGGCACAAGACTGgtgacgacgaggacgaggaggatgatgaccagcagcagctggaggagagcgCCTTAAACAGTGATGGCAATGGGGCAACGGGAGCGGCATCGGGAAGTGCTGCTGTCGTGACAgtggctcctccagctcccacAATGAAGATCCGCATACCCGAGGTGGCCTGCACCATTTGCGGGGCACGCTTCACCGATCAGGAGCACTTTAGCAAGCACATCCAGAAGCACGAACAGGAGCTCTACGTGGATAATCCGCTGGCGGCAATGTTCGACGACGGGCCGGCGGATGCCGGTCAGTTCCAGGTTGAGCGGCAGAACGAGAACGGGGAGTACGCGTGCGATCTGTGCGCGAAGACGTTCCCCCAGGTGATTGCACTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTgaccaacaacaaccatactaccagcaacaacaacaacagcagctcgATGCTCCACCTCCGCGAGCTTCATGCAGTGGGCCTGATGcccaaccagcagcagcagcaacagcagcagcagcagagccacagcagcaactccagcagcaacatgaaccacagcggcagcagcagcagcaagtcgATGAAGCGGAAGCGTGAGCTTAAGTGCGAGTACTGCGCCTCCACCttcatcagcaacaacaatctgCGCCGCCACATGTACGAGCTGCACAAGCACGAGGTAAGCAATCTTCCTGAGCCGCCGGTCATCTTGGTGGACGACCATCTTCAGTGCCGTCGCTGTCAGCTCAGTTTCGAAACGAAGGAGCTGTGGATCGAGCACAAGCTGGCCGATGCGAAGGTGGTGCGTCCGTTCTGTCCGTTCCAGTGGGGCTGCGACCTGTGCGGCGAGTATCTGTCGCGCAAGGAGAAGCTGATGAATCACATTAACAACCATCTCAAGGAGGAGGTCATTGTGCCGGTGGCCACCAAGGCGGCCATTGATCgggaagcggcggcggcgacagcagcagatgcagcaaACGCGGCGGAGCTAACAGCGGATGGTGATGTTGAAAGGGAGGAGAACAACGCTCAGGACAGCAAGGATAAGGCAGCTGcagtagcaggagcagcgaAGGAAGATGATAGCGATGACCTGGACGAGGAAGATAGCtcgggcgaggaggaggaggaggaaagcTCAGGCACGGGAGACGATGAGGACGACGACTCCGAGGATGAAGATGACGAAGATGATGAGGGCGATGGGGGCGAAGGTGAAGACGAAGAGGGTGAGCTACTCCAGAGCCACATCAAAAGCCATTTCCTCAATGGACCAAAGCTCactgtggcagcagcaacagtgccagtcgccgccgcctctgcagcagcaacagcagcaggcagcgcgTCAGCAAGATCACAAGCGGCATCAGCAAAGACGAAGCCTGACTCCAAGTCAGCACTGCTggtcaacaacaacaacaacaacaataagagcAACAAGActgttgcagcagctgcagctgccacaaACTGA
Protein Sequence
MGMGLGLGLGLSLGMGMGSGKRTEASGNGRRTAGTGRRPWSGTKFKWFHLGHQITWPGLLGCRYFYFGFSFFGLSLCIIFAWPWPRLGSSCDPHRISSTASSLESPFCGTLGSGLVSVSVSGSGSGPQITSQDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDTNNKSKLFNYLDLNSAENGGASSDHHQQHQPQSENELDAEKATATATTAANILDGIPSLKKRKSLTVYPLPALPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDMPFMASDYDYTAQHGVNAHSVAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPEQYRPLLSHDKVEFIEQNEEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLSTLRGKIPMLPISVTDVDAAAGEDGVTAVALAVADAGAGVVAMASPSVTVSGEVIGTPGAGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDIADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGGGGASSDNASTTGSGLARSNSMEHSPGKRSLLGALGIGVGSSTEESRSSSVAPTLTSTPKPAGGGGTAATSASAPSSANRDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDEDDEEPSSVAKKMRLDDSSNNSSLVGVASQQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAANRMTPKSLTITATPAADASPEATGVLSASIASAPATPSSNVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSELELQQHKRNVHKLTSVSASASASASASASTSSKMEDDSLMDEGKATGGEHADLSTLSANASSASAAGLGVGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQQETQLQQQQAALQRAVFRHKTGDDEDEEDDDQQQLEESALNSDGNGATGAASGSAAVVTVAPPAPTMKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTSNNNNSSSMLHLRELHAVGLMPNQQQQQQQQQQSHSSNSSSNMNHSGSSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVILVDDHLQCRRCQLSFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIDREAAAATAADAANAAELTADGDVEREENNAQDSKDKAAAVAGAAKEDDSDDLDEEDSSGEEEEEESSGTGDDEDDDSEDEDDEDDEGDGGEGEDEEGELLQSHIKSHFLNGPKLTVAAATVPVAAASAAATAAGSASARSQAASAKTKPDSKSALLVNNNNNNNKSNKTVAAAAAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00527463;
90% Identity
-
80% Identity
-