Basic Information

Insect: Drosophila pectinifera
Gene Symbol: JARID2
Assembly: GCA_008042775.1
Location: VNKC01002261.1:12278-21047[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-22 8.4e-19 67.6 0.0 6 89 1898 1979 1893 1979 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-22	8.4e-19	67.6	0.0	6	89	1898	1979	1893	1979	0.92

Sequence Information

Coding Sequence: ATGGTTGTCTCCAAAGACAACAAGCGTCGCCGCAAGGAGACGGAGACcccaccgcccccgccgccccTACCAGCGTCAGCGGTGGCCACTCCAACGGCGACGACAACGGCGACTCCGGCCATTGAGTCGTCACCCGAAATGCCCAAGAGAACGAAGGTGCAGGCTCAGCGGAAATTTGCCCAGGGTCAGAGTGCTCCCACCAGTAGCTCCTCGTCAAGCATTGCTGCTTACAgcgctgcagcggcagcgggatcTGGCAGTGGATCCGGGCCGAGCACCTCTGGAGCGGATAGCTCGCAGCCCCCGATCGAGATCCTGCCGAACAAGTGCCCTAAGGCTCAGGATTTTCTCACATTTCTGTGCTTTCGTGGCACTCCAGCGCTGCCGGCGCACTTGGACTACCTCAACCAGGGCAAGTCCAAGGATTCGGGCAAGGAGGCAAGCAGCAACGCAACAGCGGGTCAagccaacaataataacaacgcCAAAAAGGTCGCCAACAACAGTCGGCAGCAGACGGGCGGCATGGGAACGGGAGGCAAAAAGAAGCGCGGTCGTCCCGCCAAGTCAGCGAGCGGCAAGAAAGCAGCGGAGGCGGAAACGACGACGTCCACCGAGAAGTCTGCCTGCAAGGCAGACGAAGCAGACAGTGATAAAACCAATCTCATTTCAGCCGAAAAGCCTGCAAATCCTTCGCCAACACCTGTGCCTGAGCCTGCTCCTGCGCCTCCTGTGCTGCCAGGAGCTGTGCGCAAGCGAGCGGAGATCGTCCCCGATGGCAATCGACGCGGTGGAAGAggcagggcagcagcagctataACAGGAACGACTACGAGCAAAGGAGCAGCCACCACCAACGATAACAAGCGACGTTCGAATCGTGCTAGCACCAAGGAGAGCAAATCCGTGATAGAAGATGATAACGAATCGGAGGAGGAAGAGGCGGAGGATCAGAACAAACAAGAGGTGCCCGATGATGAGGACGACGAGTTCTTCTCCGCCCACGATGCCTCCTCTCGCAACGGTGAAGCGGAGGCGAAAGCTGAAAGTCCTGTTAAAACGGAGGAGAAAGCCAGACGAGGTCGTCCCGCGGCCAATAAGAAGCCATCGGAGCCGCCAGCAGCTGTAGGCTCTGATGCCCAGCAACCAGCTCTGAAGGACAAGGCGCCCGTTAAGCGGGTACGGCAAAGGGAATCGCCAATTTTTATACCATCACCTGAGTCCTCGGGCCGCATGACAAGACAGCGGGCTTTTTTCGAGCCCGTCAAGGTTCCGCCGCAGCAAGAGGAGCCGGCGACGCCGGAGTCGCCCAAGGAGGAGCCCGAGTCGCCAGAAAAGTCGGAACCCGAACCAGAGCCCATTAAGAAGACGAAGGATGCCGCCAAGGAGAAGACGAATTCTAGTATTTATGCCAAAGACgccaagcagcagctggagaacgGAGACAGTCCACATGGTGCGGGAAACAAGGGCAAGAAGAGCTTGAATGTCTTCGATTTCAGCTCGGATGACGAGCAGCCGTTGGCAAAGTCAATTAAGCTGAAAAAGGGCGGCAAGGGCCCCAGCCCCAAGAAGggcggagctgctgcagctgctccggcgGCCAGGAATCGCAAGGCGGTCGCTAAAAAGCTAGAAAAGgaaaaggaaagggagaaagaaaaggaaaaggaaaaggaaagaaaggagaaagatctggagaaggaaaaaaaggagaaggaaaaggagCCCATCCCCGAGATCAAAGTGGAGGAACCGCCAAGTGGAGGGAAGCGCGGCAAGGCAGGGAAAAAGAAAGCAGAGGATCCTCCTGCCGACGAACAGGAACTGGCGCCACCCTCGTCCAAGAAGGCCACGCCTAATGCCCGCGGATCTCGAAAAACGGCGAAGAGCAAGGCCTCAGAGGATTCAGCAGAGCTCGAGCCTCAGCGAACTCAGCGCCCCTCCCGCAAAACCAAGGAGGCGGCTGCCATCTATATGGGTATCATTGGCCACAAACTGCAGCTGGCTGACGATGAGGAGGACGACCTGTCCTTGAGCAGCTTCCCGGACATACCCAACGTCAAGGAGATGGAGAAGATGGAAAACGAGATTAAGCGCAATGCGGCGGGAAAGTTAAGCGTGCCGGAGGCCACGACGGTGCTTCCGGCAGGCAAATCCACCCGTAAGCCGTCGCCCCGACCCAAGGATTCAACAGCAGGTGTAGCACCAGCTGAATCAGTTAGCAAGGACGAGTCGCCCTCCCCTCCAGAAGCTGAGGAGGAGAAGCCACCCCCTCCAGCACGGCGTGGACGTCCACCCAAGCAGGGCAAGCCAGCTGGCGGAGCAGcggcaccaccaccgccgccccctAAGCCGCCAATCGAGGGCATGCTGGTGAAGAAGGGCTCCCTGGCCAAGATATCCGAGCAGGCTAAGCCCAAAGCCAAGTCCGAACATTCGAAAGTCGActccgacgaggaggaggactttCTCATCAATGAGGAGCTGAACGAAACGAAGCGCAAGCTGGAGAAGAGTTTCAGTGACTCGGACGACGAGCCGCTGGCCATCAAGGTGCCATCGGTGGTGGTAACGTCGTtggccaaggagaaggaggaagcATCACCCTCAAAGGTGTTCAGTCCGCAACCGCCAAAGCTGTTGGCTACACCATCGCCCACCATCtcggctcctgctccagtattttctgctgctgccactcctCCCTTGTTGGCGATGCCTACAACACCGCcggccaccaccagcaccccCATCACCCAACTGACCATGTTGCCGCTGACGGGGAAGGCCACGCCAACGCTGGGAGGCCCAAGCATGCCCACGATGTTCCCGGGTATGCACCCCAGCTATTCGCCGGTGAAGGCCATGGAAAAGAAGCCGCCGGTGCCTACGTCGAAGATCCTCAACGTACCCGCCACCTATGCGCTGCCGGGGAGTGCTAGCGGGACGGTGGGGGGTTTCCAGAAAACCTCTTCGTACCTGCCGCAGGCATCGCCCCACTATCATTCCGGATATGTGCGTCCGCCGCCCACGCCAACGCATCCGTTTgggagtggcggcggcggtgcacCGTCCGGGAGTAAGACTCCCTCGCAGGGCACAAACTCCTCATCCCCGCTGAAGTATCAGACGCCGCCAACCACTTATCCGCCGCCCATCGAGGCGTATCAGTGTCCCAAGATCAATCCGAACTTTCTAACGCCCAAATATGAGCGAAgtccactgccgccgccgcgaTCCTCCTCGAGCAACAACTTTCCCAGCCCGTCGCCGGTGAAGTTTATGCCCACGTCGAGCACAACACTTACCACGACTACCGTGGGCACACCGTCGTCCATCGCCGTCACCAAGAGCCCCTTGGCCCCGCCGCCACCATCGCCGCCGGTCAGTCAGATGATGATCCAGACGGCCAGCTTGAATCTGAGCACGAGCATTGCGGCCACCGTGAATGCAGCACCGATGGCCGTAGCATCCacatcagcagcggcggcacagcaggcggcggcggcaggaatAGTTGGAGGAGCCACTCCAAGGACCACGAcaacgccgccgccagcaCACAGCAATAGTGCGGGAGCAAGTGGAGCCGCTACTAATTCCGATCCGCTAAAGGATGAGATAGGAAGCATCTTGGCGCAGGCCACCTTAATGCCGAGCAAGGAGGAGTCTGGCAAGATCTTCGGCATTGCCAGCGTGAGCTTGGCCCAGAGTTCGGGGCCGGACAACACCAAGTGCACCCTGGGCAAGTGCGGGTCCATTCACAAGCCGGTGCTCGGACCAGTGGTGCCCACGGAGGGTTATTTCGGTGACCAGTTGTCCAGCAAGGAGCGGCGCAAGGCGAAGGTTAATATGACCCACGAGCAAATCCAGAAGTGGCTTATCGAGTGCTCATCCAATCCGGATGAGATCCAGGACGATTTGGACGACGATTTCGATGATAGTCTGCGACCACAGCAATCTACAACGCCGCCGCCCACAAGGGATGAGAAGGAGCTGAGTGCCAGCTTCAGTTCGTCTTCGAAGAATACGCGCGGCGATCTTGGCAAGAGCGAGAGCGCCTGGTCGGCCAAGGGACCGTCATTAAAGGCCACCCCCGTGCTGGTCACTCCGCCCAGTCGCAAGGAGCAGCTGGATCAGGCAGAGGCCAAGGATTGCTGCGACGCTTTGGACTACGACAAGTCCCCAACGCCAGTGAATCTCACACAGAAGCTCAACGCCAGTGAGACACTGAGTGCCGTCGACAAGCGCAAGGCCAAGGAGTCGGTAAAGGCATCCGCGGCAGCCAAGGCGGCTCTTCCACAGCCGCGTAGTGCCGCCACCACGCCTCCCACTCCCATCTCGACGCCCACTCCTATATCTCTCGCTTCAGCCAAGAGCAGTCCCACTCCTCCGCCAGTTGCCAAGCCGAAGGCGGAGAAGGGCAAGAGGAatgctggagcaggagctggagtaGATAATATTGCTTCACCGCAACCCGCACCCACTCCACCGAATCCGAAGCGAACGCCGGTTTACAATCAAAAGGGCAACaaggcacagcagcagcatcaacaggCGGAGGCTAAGACCCCTACTAATCCTCCCACTGCTCCGGGCACCAAAAAAGAATCTGTTTATGCCTTtggcaaggaggaggaggcgatCGGCATCAAACCGGGAAATCGTCGGCGAGCGGCTCCCAGTCCCAttcctcctgctccagctgcagtgCCCAATGCGCTGAGTGAGCGATCGCCAACCAAGAAgcgagcggcagcggcggcggcagccacagCAGTCCAACTGACGCTGAGCCCCACAGAGAACTGTAAGATCGAGGGCAAGCCGAAGGCCACGACAGGGCGAGGAGCTaagaagcaacaacagcaggtcgctccacctgctcctcctccttcagcagcagcagccgcagcagcacctgTAGAAGCAGGCGGGGATTCGGATGCCGAGGGAGCCACATTCTACATACCGCTTCAGGGTGCAGGCGTGGGCGGCAGCGGTGACGGCGGCATTCAAGGTGTGGCCGTCAAGCTGGGACGCGAGGGTCCAGACGGGCCCAACCAGAAGGTGGTGATGCAGGCCACGCTGGTGACCAAGGCCCAGATGGACACCAACTCGAAGCCGCTGCCAGAGTCACTGAATACCAACGAGCTGGTAAAGACGCTCCTCCATGCGGCGAGCAATGATGCAGCCTCCGCCACGACCACGACAAGCCTCAAGAGCATGCCCAAGGCAAGCACTTCGGCAGCAGCTGGAACAGGAACTGGAACAGGTGCTGGAGCAGCGACCTCTAGCTTGGTGCGCGTCAACTCTAACTCGTCGCTCTTCTCTGGCTCAGCCAAATCGAGGACAGCTGCCCAGACGAGTTCCACAGCGGCTGCCGTGGCCAAGAAATACAAGGATGATACACCTATCAAGATGGCCAATAACACGGCCTTTCCGCGTCACGACGATCCCACCCAAATGGTGGAGGCACCCATATTCCGACCCACGGAGAAGGAGTTCGCCGATCCCATTGAGTTTATCGAGAGGATCACACCGATTGCGGCCAGGTTTGGCATCTGCAAGATCATTCCGCCGGCGAGCTTCAAGCCCGAGTGCCGGATCTCGGATGAGATGCGATTCACTGCGTATAATCAGTATGTGCACAAGATGCTCCATCGCTGGGGTCCGAGTGCCAAGGAGCTCAGCGCGATCAAGAAGTATTTGGCTACGCAGAGCATCGTGATGAACCATCCGCCGTGGATCGGTGGCATGGAGGTGGACCTGCCACGCTTGTATCACACGGTCCAGGAGCTGGGCGGCCTTAAGGAGGTGATTGAGAAGAAGAAGTGGTCGCGTGTGGCAGAGGAAATGTGCATACCCAAGCTGGCCCAGGATCGGGTGACTAAGTTGGATGATATCTACTGCAAGTACCTGCTGCCATATGACACGCTATCGCCAGCGGAGCGCCAGAAGCTCTTCGACGAGGTCGAAGCGGATTGGGCCAAGCGGGAGGCAAGGGCTCGACGGAATGCGGATCGATTCGTGAACACGGAGAGCGTGTCCAACGAGGAGGACGATCTGAGCagcgatgaggatgaggagtCCGAGGAGGAGATCGATGGCGTGTCCATGGAGTGTATAGTAAAGGGCCGGAGCATGCCGCTCAGCCAGTTCTATCGGATTGCCCGCAACACGATGGCGCTGTGGTTCAAGAGCACCGATCCCACGGTCAACGAGGTGGAGGCTGAGTTCTGGCGCCATGTCGCGGTCCGCGACAGTCATGTGTGCGTCCACTCAGGCTCCATTGATAGCTCAGGATGGGGCTACGGTTTTCCCAGTCCGGGCCCCAAGGGCAAGGGCTCCAACTATGCCAGGCATCCGTGGAACCTGAAAGTGCTGACCAATAACGTTGGCTCTGTTCTGCGCTCCCTGGGACCTGTTATGGGCGTTACCGTGCCCACGCTCCACGTCGGCATGCTCttctccgcctgctgctggtacCGGGATCCACATGGCCTGTCCTGGATCGAGTATCTGCACACGGGAGCCTCTAAGCTGTGGTACGGCATTCCCGACGATCAGAGTGCGAACTTCAGGTCGGCGTTGACTTCGCTGATCCCTACACACTGCCAGAACAAGACCATCTGGCTTCCCTGTGATACGGTGATGGTGCCGCCGCACATGCTTACGGATCGCGGCGTCTCGCTGTGCCGCATAGAGCAGAAGCCTGGCGAGTTCATTGTAGTCTTTCCCAGGGCCTACACCTCCAGCCTGGCCACCGGCTATGTGGTCTCTGAAAGCGTATACTTTGCCACCATGTCGTGGCTGGATCTCGCCAAAGATGATTTCAGGGACATTCATGAAAGCTGTGAGCCAGCTATGTTCTCGCTAGAGCAACTGCTCTTCGCTTTGGGCTATGACCAGCGTGTGAACTCGGAAGCTCTGCATCAGATGCTGCCCATGCTGAATGATGTTTGCGAGAAGGAGTCGGCCGCCAGGGAGCAGCTTAGGGCTGCCGGCGTAACATCCACCGAGAAAGTGCAGGCAGAGAAGGGACAAAAGGCCAAGAAGCCATCACAGCCGCCGTACAAGTCCATTGAGAGCGAGTGCGATCTGTGCCGCGCCAACCTGTATATATCGATGGTGCGGACCGAGGACGGCAACATTTATTGCCTGCAGCATGCGCTCAAGAACCTCAACAATGGCAACATCCAGGCAAAGCAATGCAAGCTGATTTACGCGTACAATGTGGACGACATACAGCAGTTAATCCGCCAGCTGCAGGAGAAGATCCATCACAAGGCGACGGTGAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPPPPPLPASAVATPTATTTATPAIESSPEMPKRTKVQAQRKFAQGQSAPTSSSSSSIAAYSAAAAAGSGSGSGPSTSGADSSQPPIEILPNKCPKAQDFLTFLCFRGTPALPAHLDYLNQGKSKDSGKEASSNATAGQANNNNNAKKVANNSRQQTGGMGTGGKKKRGRPAKSASGKKAAEAETTTSTEKSACKADEADSDKTNLISAEKPANPSPTPVPEPAPAPPVLPGAVRKRAEIVPDGNRRGGRGRAAAAITGTTTSKGAATTNDNKRRSNRASTKESKSVIEDDNESEEEEAEDQNKQEVPDDEDDEFFSAHDASSRNGEAEAKAESPVKTEEKARRGRPAANKKPSEPPAAVGSDAQQPALKDKAPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPQQEEPATPESPKEEPESPEKSEPEPEPIKKTKDAAKEKTNSSIYAKDAKQQLENGDSPHGAGNKGKKSLNVFDFSSDDEQPLAKSIKLKKGGKGPSPKKGGAAAAAPAARNRKAVAKKLEKEKEREKEKEKEKERKEKDLEKEKKEKEKEPIPEIKVEEPPSGGKRGKAGKKKAEDPPADEQELAPPSSKKATPNARGSRKTAKSKASEDSAELEPQRTQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKEMEKMENEIKRNAAGKLSVPEATTVLPAGKSTRKPSPRPKDSTAGVAPAESVSKDESPSPPEAEEEKPPPPARRGRPPKQGKPAGGAAAPPPPPPKPPIEGMLVKKGSLAKISEQAKPKAKSEHSKVDSDEEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPSVVVTSLAKEKEEASPSKVFSPQPPKLLATPSPTISAPAPVFSAAATPPLLAMPTTPPATTSTPITQLTMLPLTGKATPTLGGPSMPTMFPGMHPSYSPVKAMEKKPPVPTSKILNVPATYALPGSASGTVGGFQKTSSYLPQASPHYHSGYVRPPPTPTHPFGSGGGGAPSGSKTPSQGTNSSSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSPLPPPRSSSSNNFPSPSPVKFMPTSSTTLTTTTVGTPSSIAVTKSPLAPPPPSPPVSQMMIQTASLNLSTSIAATVNAAPMAVASTSAAAAQQAAAAGIVGGATPRTTTTPPPAHSNSAGASGAATNSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDSLRPQQSTTPPPTRDEKELSASFSSSSKNTRGDLGKSESAWSAKGPSLKATPVLVTPPSRKEQLDQAEAKDCCDALDYDKSPTPVNLTQKLNASETLSAVDKRKAKESVKASAAAKAALPQPRSAATTPPTPISTPTPISLASAKSSPTPPPVAKPKAEKGKRNAGAGAGVDNIASPQPAPTPPNPKRTPVYNQKGNKAQQQHQQAEAKTPTNPPTAPGTKKESVYAFGKEEEAIGIKPGNRRRAAPSPIPPAPAAVPNALSERSPTKKRAAAAAAATAVQLTLSPTENCKIEGKPKATTGRGAKKQQQQVAPPAPPPSAAAAAAAPVEAGGDSDAEGATFYIPLQGAGVGGSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPESLNTNELVKTLLHAASNDAASATTTTSLKSMPKASTSAAAGTGTGTGAGAATSSLVRVNSNSSLFSGSAKSRTAAQTSSTAAAVAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWSRVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDLSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNVGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNDVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKPSQPPYKSIESECDLCRANLYISMVRTEDGNIYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIHHKATVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00491299;
90% Identity: iTF_00479960;
80% Identity: -