Dpau017966.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila paulistorum
Gene Symbol
srp
Assembly
GCA_018152135.1
Location
JAECXG010000499.1:122141-140661[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-17 5.1e-14 51.7 3.1 1 34 669 701 669 703 0.97
2 2 4.9e-19 1.9e-15 56.3 2.7 1 35 723 756 723 757 0.97

Sequence Information

Coding Sequence
ATGACCAAAACGGGTAAACCGAATAAAGATAGGAATGTAGGAGTATCAGCGACTAGCAGTTTATTGAACAGTGCAGCAAACATGAAAATAAACAAGGCTCTGGCCAATACCAAAACGCAGCAGCAGACCAAAAAAGGACGTTCACCAACTACAACTTCTGCCCAAGCAACAACAATGTGTGCATCAGTGCCTCTAACAGGATCAAATGTCGATGGCAGGGATGACGAAAAAGAGATGGCAACAGAGGTAGGTGTAGGTGCCGAATCCAAAACCGAATCCAAGACCGAGGCTGAAGCCGCAGCAGCGGCGCTGACTTCGCAGTCAACGCTTGCCACAGCGAATTTATCGTCATTTGAGTCCGCGCGTTTACAGGCTCACACTTCAGTTGTCAGCGAAGCACCAAAGCAAACGGTTGCCACGATCGCGTCAGTGTCACCAAACGAATCTACAGTAATAACAACAGCAGTAATTTCATCTGCAACAACAATCGTCAGTGCACCCGCGACAGCAGTAGATGTTAATGTGATAAATGATAATCAAGGAGAACAACAGCAACACGTTACTGAGAACGCCAGTGAAAGTGTTGATAACAAAATCAAAGTGATCAACTATGCCCATCAGCATCAACAGGAACAACAAATTTATGAACACACTAATTGGTTAACGGCGTACGATTTGACAAACAATTCTTCAAACCCTGGAGACAAAACCGAGTTCTACGCCTTGGCTCCACAGCACTATTTGGCCCACTTGCCCTATCATACCCACACGCACAGCCATCCCCATCATTACGATCCTCATCAAAATCTCAATAGTGTCGTAAACACGGATTCAATGCGTAATAATTTTGCTTTATATAGTGTGTACGGAAGCGGTGGGGGCACTCCCGATCATTTGCAGCAACATGTTGTTGCACTCAATGCTGCTGCAACGGCAGCGGCGGCTGCAACGGCGGCATCATCATCTTTGACCCATGGCACATCGAATATTGATGAGGTCATTCAAGATACTCTAAAAGATGAATGCTTCGATGATACCCACAGTACTAGCTTCCACATGCTGACACCCGTCTCCGACCTGCAAAATCTCAAAGACCCGAATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCGGCGACTCGCCCTCACCCACAACTGCCCTTTCTACTCTGCAAAGTTTCACCCAGTTAAACGGTGCAGGACATCCGCGAGAAAGTTATGGCAGCATATCACCCGAGCACAGCAGTTATTTTACAACACCGTTAAGTCCTGTTTTGCAAACCAGTTCTGTCTATGCGGGGCCTTTGCTTACCTCAACTGCTAATGGAATGCAGTACGGTATGCCAATGCCCTCTCCCACCCACAATCATGTACATCTCCATCAGCAGCCTCATCAACACCACAATTCAACAAGCAACAGTCCTGGCCCTGGTTCTGGTCCACTGGGTGCACTTCATGCTAGTTCCTCTCCCAACCACAGTCATGGGCATCTCCAACAGCAAACGCAACAGGACCAGTCAAACAATTCCACAAGTAGTAGTCCGGTGCCTGGTTCTGGTCCACTTGTTGGAGTTAATGGGGGAAGTGGAGGAGGGGTTCTGCCTGCCTACGCTTCGCTGGCAAATTACCGCGGACATAACGATGCCTGGGCGAATCATTACGAACCAATTGGTTATGCATCCTCCAATGCATCTGGCCAGACACAGTCGTCACATCTAGGAACCGGAGTTATTCGCAATGGACGGGCTATAAGTGCAGCAAATACAGCCGCAGCGATTGCAGCAAATGACGTAGCAGCCACAAATAGCGTAGGAGTAGATCCATCACGTTACCTAACTGCATCTGCATCTCTAACTGCATCATTTTTCGATGCCGATTTGTTCACTGAGGGGCGAGAATGTGTCAATTGTGGTGCGATTTCAACCCCATTATGGCGACGCGATAACACAGGACACTATTTATGCAATGCCTGCGGCTTGTATATGAAAATGAACGGCATGAATCGACCCTTAATTAAACAGCCTAGAAGATTGAATGCGTCTAGGCGAGCCGGTCTCTCTTGTTCCAACTGTTTGACTACCTACACTTCTTTATGGCGACGTAATCCTAGCGGTGAGCCTGTGTGTAACGCTTGCGGGCTCTACTTTAAGTTGCACAATGTTGCGCGGCCGTTGACTATGAAAAAGGATACCATACAGAAACGGAAACGAAAACCCAAGGGTACCAAAAGTGAAAAATCGAAAAAGAAAACTATTGTCTCGCACAGCAGCATCGAGACTTCCAATAATAATAATCTATCCTGTCAAAATGCTGGCCTACCTTTGGAAAATCATATTATGAATGAGGTTCCTGATGAAATACCTGCAAGCTCAACCATTGGGCAACAACAATATTTCAGCAGCCGCAGTGGCGGCTGCAGCAGCTATGAGTAA
Protein Sequence
MTKTGKPNKDRNVGVSATSSLLNSAANMKINKALANTKTQQQTKKGRSPTTTSAQATTMCASVPLTGSNVDGRDDEKEMATEVGVGAESKTESKTEAEAAAAALTSQSTLATANLSSFESARLQAHTSVVSEAPKQTVATIASVSPNESTVITTAVISSATTIVSAPATAVDVNVINDNQGEQQQHVTENASESVDNKIKVINYAHQHQQEQQIYEHTNWLTAYDLTNNSSNPGDKTEFYALAPQHYLAHLPYHTHTHSHPHHYDPHQNLNSVVNTDSMRNNFALYSVYGSGGGTPDHLQQHVVALNAAATAAAAATAASSSLTHGTSNIDEVIQDTLKDECFDDTHSTSFHMLTPVSDLQNLKDPNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDSPSPTTALSTLQSFTQLNGAGHPRESYGSISPEHSSYFTTPLSPVLQTSSVYAGPLLTSTANGMQYGMPMPSPTHNHVHLHQQPHQHHNSTSNSPGPGSGPLGALHASSSPNHSHGHLQQQTQQDQSNNSTSSSPVPGSGPLVGVNGGSGGGVLPAYASLANYRGHNDAWANHYEPIGYASSNASGQTQSSHLGTGVIRNGRAISAANTAAAIAANDVAATNSVGVDPSRYLTASASLTASFFDADLFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYMKMNGMNRPLIKQPRRLNASRRAGLSCSNCLTTYTSLWRRNPSGEPVCNACGLYFKLHNVARPLTMKKDTIQKRKRKPKGTKSEKSKKKTIVSHSSIETSNNNNLSCQNAGLPLENHIMNEVPDEIPASSTIGQQQYFSSRSGGCSSYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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