Basic Information

Insect: Drosophila paulistorum
Gene Symbol: -
Assembly: GCA_018152135.1
Location: JAECXG010000822.1:28554697-28564864[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.016 15.7 3.4 1 23 288 310 288 310 0.98

2 11 0.001 0.079 13.5 10.5 1 23 317 339 317 339 0.96

3 11 0.0001 0.008 16.7 6.5 1 23 345 367 345 367 0.98

4 11 0.00031 0.024 15.2 2.3 1 23 373 395 373 395 0.95

5 11 2.2e-05 0.0017 18.8 0.5 1 23 401 423 401 423 0.97

6 11 7.4e-06 0.00058 20.3 0.1 1 23 429 451 429 451 0.98

7 11 7.1e-05 0.0055 17.2 2.0 1 23 456 479 456 479 0.97

8 11 0.00081 0.062 13.9 0.2 1 23 485 508 485 508 0.94

9 11 0.00017 0.013 16.0 0.1 1 23 562 584 562 584 0.98

10 11 0.015 1.2 9.8 2.7 1 23 700 722 700 722 0.95

11 11 0.0045 0.35 11.5 4.9 5 23 735 753 727 753 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.016	15.7	3.4	1	23	288	310	288	310	0.98
2	11	0.001	0.079	13.5	10.5	1	23	317	339	317	339	0.96
3	11	0.0001	0.008	16.7	6.5	1	23	345	367	345	367	0.98
4	11	0.00031	0.024	15.2	2.3	1	23	373	395	373	395	0.95
5	11	2.2e-05	0.0017	18.8	0.5	1	23	401	423	401	423	0.97
6	11	7.4e-06	0.00058	20.3	0.1	1	23	429	451	429	451	0.98
7	11	7.1e-05	0.0055	17.2	2.0	1	23	456	479	456	479	0.97
8	11	0.00081	0.062	13.9	0.2	1	23	485	508	485	508	0.94
9	11	0.00017	0.013	16.0	0.1	1	23	562	584	562	584	0.98
10	11	0.015	1.2	9.8	2.7	1	23	700	722	700	722	0.95
11	11	0.0045	0.35	11.5	4.9	5	23	735	753	727	753	0.92

Sequence Information

Coding Sequence: ATGTGCGCTGCACAGAGCAATCCGCCGCCCTTTGGCTACACTTGGGGCTTTGCAGACAACGGCAGCCGTACCGCCGAATCGGTATTGGAAATATCGCCAAATATTAATTACACCGTTAGTGGGGAATCGATGCCCTATCTGTTATCCACGGATGGATCATTGGCCGTACAAAAGGATGTTAAAGGTGCACTGGCTGGCAATAAGGCGAATGTTGTGCGTCGCATGTTCTTGGTGAACGATTCCTCATTTCCGCACGGTACACAAAGAGTAATTACCACAGGTGCCGCCTCGACGGTGGTGAAGAAACAGGACTCAACCACTCAACAGGTGTTGAGTATAAATTCACTCGATAAGAACTATCTTCTGGTCGATCAGGCCACAGCCGCAGCTGCAGCAGCTGCCGGTGATCCAACGGCTCATCATCATACTTTGACGAATGGTAGCATTGTTGATGCCAAAACAGGACAAACCGTTTTGAGTTCGGGCGCCGCAGCTGCTGCTGCTGCTAAATCCCATTTCGGTTCCATTGGTGCACTGCATCTAACGCAAGAGGAGTGCAATGAGATATTGATAAAGCGTGCCATCGCTGCCGGCCACCATCAGACGCACACAATCACCACCACCGCCGACGGGGCGCATCATCATAGCACGGCGCCAGGCGCGACACCAAGTGACCTACTTCCTGGTATTTCAGTTCAAGTACAGAAAGTAATACAAGGACTCGAAGAGAACGAGGACTCACAGGGCGACGCACCCAACTTAAAGTTGGAGCCAGGCACATTAGAGTTGTCCCCAAAGACCGAACTACAGGAATCAATGCATTTCAGCGAAACGGACGCCACTATCAAGAAGGAACGCCCGTACAGTTGTGACGAGTGCGGCAAGTCCTTTCTGCTCAAGCATCATTTGACCACACACGCCCGCGTCCACACAGGTGGTGAACGTCCACATATCTGCACCCATTGCGGTAAAAGTTTTGCCCACAAACATTGCCTAAATACCCATCTGCTGTTGCATTCAACGGATCGCCCATATCAGTGCCAGGAGTGCAAGAAAAGTTTTACCCTTAAGCATCATCTGTTGACGCATTCACGTGTCCATAGCCGGGAACGGCCATTTGTGTGCCAGGAGTGTGGACGCTCATTTCCATTAAAGCGTCACCTGGTCACTCATAGTAAATTTCACGCAGGCGAACGTCCATACGTCTGTGAGGAATGCGGTGAGAGTTTTGCCCAGGAGAATCATCTGATTATGCACTCGCGCTTTCACGGGTCCTTGAATCCATTTGTTTGCTCTGAGTGCGGTGCCTCGTTTCCACGTAAATTTCAATTGGTTAATCACGGACGTATACACGGCAAGATACCACATTCGTGTACAATTTGTGGTAAAGAATTTCTACAGAAGCGCACACTAGTTTCCCACATGAGGCGCGTACATACGGGCGAGCAGGCGCATCCCTGCGTGAGTTGTGGCGAGGGTTTCCCCACAAAGGCCGAACTGCATCAGCATGTCCGTGCCGCTCACAATGGCGTTAATCCCAATACAAGTAGCGCCACCATAATAGCTAATCAGCAGCAGCTACAACAGCCTCACCATCACCCCGGTCATCCGCAGACCATAACTGTTGTCAGTAATCCGGTAACAGTGTCCATAACTGATGCCAACGGTGTGGCAAGACCGCAATTTGTTTGCCGTGAGTGCGGCAGCGCCTTTAATAGCCGCGAAGCATTGGCCCTCCATTTGCGTCTGCATACTGGCGATAAGAGCCTAATGACCGATTTGTGCGCCCTGACGGCAGCTATACCAGGACACTTCCTGAGCACGGCAAGTCTTAATCCAGGCACTGTGGTAGCAGCCAATCCAAATTTGGTTGGACAGAGTCCAGTGCCAGTGCAAATTATTTCGTCCACCGGCCAGTTAATGTCACAAACCACGCTGGTGCAGGCCGCCAATTCGACCCATCCGCAGGTTGTCACCGCTGTGCCCCACATGCCGTTGCATGCCACACAACAGCAGCATCTGCAGCATGTTGGCGCACAACAACAACAGCAGCAGCAACAACTTGTACCCGCCGCGCCGGCCAATAAACCAAAATCGCATTTTTGTGCCAGCTGCGGCAAGGGATTCGCTGCCAAGCATGGCCTAATGCAGCATAATCGGCGTCATCCCAACGGCGGTTGCACGGTGCGCACCCATGTCTGTGAGTGTGGCAAGGCATTCTTCCAGAAGAATCATCTGATGCTTCATCAGCGCCAGCATTTGGAAACAAAGCCAGCCATATCACAGCAACAGCTTGTTGTACCAACTACTTCTTACTAA
Protein Sequence: MCAAQSNPPPFGYTWGFADNGSRTAESVLEISPNINYTVSGESMPYLLSTDGSLAVQKDVKGALAGNKANVVRRMFLVNDSSFPHGTQRVITTGAASTVVKKQDSTTQQVLSINSLDKNYLLVDQATAAAAAAAGDPTAHHHTLTNGSIVDAKTGQTVLSSGAAAAAAAKSHFGSIGALHLTQEECNEILIKRAIAAGHHQTHTITTTADGAHHHSTAPGATPSDLLPGISVQVQKVIQGLEENEDSQGDAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKHHLTTHARVHTGGERPHICTHCGKSFAHKHCLNTHLLLHSTDRPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRSFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCSECGASFPRKFQLVNHGRIHGKIPHSCTICGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFPTKAELHQHVRAAHNGVNPNTSSATIIANQQQLQQPHHHPGHPQTITVVSNPVTVSITDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAAIPGHFLSTASLNPGTVVAANPNLVGQSPVPVQIISSTGQLMSQTTLVQAANSTHPQVVTAVPHMPLHATQQQHLQHVGAQQQQQQQQLVPAAPANKPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPAISQQQLVVPTTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01556276;
90% Identity: iTF_00523858;
80% Identity: -