Dpau011114.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila paulistorum
Gene Symbol
-
Assembly
GCA_018152135.1
Location
JAECXG010000805.1:3901684-3906319[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0011 0.084 13.5 1.1 1 23 215 237 215 237 0.97
2 25 0.0025 0.19 12.3 2.1 1 23 243 265 243 265 0.98
3 25 0.0024 0.19 12.4 0.1 2 23 297 318 296 318 0.95
4 25 0.0039 0.3 11.7 1.9 1 22 392 413 392 415 0.90
5 25 7.2 5.6e+02 1.4 0.7 2 21 425 444 424 445 0.90
6 25 0.61 47 4.8 0.3 3 23 486 506 485 506 0.96
7 25 0.019 1.5 9.5 3.8 1 23 586 609 586 609 0.96
8 25 0.64 50 4.7 1.1 1 21 618 638 618 639 0.87
9 25 0.35 27 5.6 3.9 1 23 648 671 648 671 0.97
10 25 4.4e-05 0.0034 17.8 0.4 2 23 694 715 693 715 0.97
11 25 1.7e-05 0.0013 19.1 5.5 1 23 723 745 723 745 0.99
12 25 0.0079 0.61 10.7 2.2 1 23 892 914 892 915 0.95
13 25 0.032 2.5 8.8 0.5 2 21 924 943 924 944 0.92
14 25 0.71 55 4.6 5.5 1 23 953 976 953 976 0.94
15 25 9.2e-06 0.00071 20.0 4.3 2 23 991 1012 990 1012 0.97
16 25 0.00022 0.017 15.6 1.1 1 23 1018 1040 1018 1040 0.98
17 25 0.0095 0.74 10.5 0.5 2 21 1067 1086 1066 1087 0.94
18 25 0.0083 0.64 10.7 4.8 1 23 1133 1156 1133 1156 0.96
19 25 3.2 2.5e+02 2.5 0.5 1 23 1193 1216 1193 1216 0.92
20 25 4.5e-05 0.0035 17.8 1.2 1 23 1252 1275 1252 1275 0.98
21 25 5.4e-06 0.00042 20.7 0.2 2 23 1316 1337 1315 1337 0.95
22 25 0.00076 0.059 14.0 3.0 1 23 1343 1365 1343 1365 0.99
23 25 2.1e-06 0.00017 22.0 2.0 1 23 1371 1393 1371 1393 0.97
24 25 1.9e-07 1.5e-05 25.3 2.4 1 23 1399 1421 1399 1421 0.99
25 25 0.0005 0.039 14.5 0.2 1 22 1427 1448 1427 1451 0.91

Sequence Information

Coding Sequence
ATGTTGCCTTCGGATATTTGCCGTACCTGTGCCACACAGAATAATAATTTATTGCCGCTTGCCTCCTGCTCGGAAAAGCTACAGGAATTAACCCAAATTCCGCTATTGGAGCTCATCGGCGATGAAAATTTGCCCCAACATTTGTGTGGCGATTGCTTGGCCAAATTGGAGAATGCCTATGCGTTCGTGGAGCAAGCACGCAAGGTGAACAGGGATCTGCTAATGAAGTTGAGGCAGTGCCTTCTCGAGGAGACACCCATCGATATTCCCATACCCAATGCAATGCAACATCAAATCAAAATGGAAATGGACGATGAGGATGGCGACCAGCCGGAGTTAGACGAAGAAGAGACTGCAGCCACAAGATTGGAACTCAAATGGCATGCAGACAGTGATGCCGAAAGTGAAGCAGAGGAGGAGGAAGCCGCCGATGGCAATGAAGATGAATACAAGCCATATCAGCCAAGGCGGAGCCTACGCAAGATTAAGCAGCAATCCGATAGCGAACAGGAATCTCAAGAGCACGAGGAGGAGAAAATTAACTTAAGTCATGAGAAAAATGATCCGGAGCCGCCTCCTAAGCGTCGTCGTGGACGCCCACCACGTCTGGCCAAAACTCTAGCTCTCAACTCTGACGGTCGTCACGTATGTGCTGAGTGTGGTAAAACGTTCTCCTGGTATAGGGATATGCAGCGTCATGCTCGCAGTCATTTCGAAGAAGCCGCCTTTAACTGTTCGCAATGTGGCAAGGGATTCCTACGCAAGGATAAATACATGTCCCACCTTAAATCCCATGAGAAACGCCAGGCAAAACGGGAAAACGTGGAATTATCTAAAGAATGGATATTCGCCGAGCGTTTATATTCTTCGGAGCAACTAAAGCTTATCGAATGCAAATTGTGTGGTGTGCAATTTGAACGATTGGGAGACTTAAGATCGCATGTGGAGCTTCATTCGTCTAAAGAAACCCTTGGTCAACTCCAATTGGATCAAGAAGTGGTGAAAGAACACTTTGCTGATGAAAATATTGATCTAGAAAAGGTCAAGGATCTAATAACTCATGATATAAGTGAGAGGCATTTGGAAAAGTTCTGTGCTGTGGTCAATTCGAATGGATATGAATTAAGTTTAAGTGATTCCGATGAAGATTTGCCTCCCGACATCGAACCCAAATACCACTGTGTCTTATGTAATGTGCCCTTTAAGCGCAAACATTTGCTCATTCGACACACAGTGGAAGAGCATTCCAAAGGGCATAATCAGCCGCAATTACGTTGTAATCTCTGCCAGATCGGTTTCGTCTGTCTAAATTTGTATGAGCAACATCAACGTTCGCAGTGTTATGGTAAATTTAAACGATATGGCTGCCGAAAATGTCCTGGAAAGTTTATGTGGTTGGAGAATTTGGATAAACATGAATGTGTCCAAAGCCGGGAGGAGGACAAACAAATTCTATGCTGCCTTTGTGATGCTCAATTGCCCAGTTTAGTTCAGTTGAGAGCCCACTTGCTTAGTCATAGAGATGGCTTGACGGGAATCGATCCTCTATATCAGGCAACATTCTTCCGTTGCTATTATCCAAAAGGTTTAGCCTGCAGCCAGTCCGAACTCAGCTCTCGTATAGTTGGCGACTTCGACGCTCAAGATTATGGTCGGTATTATAATGCTAGCCTTAGTTCTGGACAGGAACTAGATTTCTATGACTCCGATTCGGATGAAAGTGATGCACCTGGAGAATCTCAAGAAAAACCTCTTCACACTTGTACTTTGTGCGGCGAATCAATGAAACGTTTAACAAATCTTATGGAACATCAACAGAATTGTCATCAAGACGAAAACGAATCGTTTACTTATTCTTGCAAGGATTGTTCAGAAAGATTCGTGTGCGATGCTCTTTTGCTGCAGCATCGACGTCGTTCATGTGGCAAATCGCATGCCAAATTCCATTGCCAGCTGTGTCAAATGCATTTCGTTTGGCAAACCAACTATGAGCAACATTTGCGGGTAAATCATCCATCCGAGAAGGATTTGGATCAGAATATTAAACGGAAACCTGCAGCTGCCCCTTCTGCCAGACTGCAGTGCAATGAATGTGATAAGGTCTTTATTTGGCCAAAGGACCTTAATCGCCACAAGCGCATGCATCAGCCCAGGACAGCATCTCAGTATGAATGCACACACTGCGAACGTAAATTTCATCGCAAAGATGGCCTTAAGTCCCACATGCGAGTGCACAGCGAAGAGATGCAACAGCTGGAGAAAATTGATAACGATGAGCATGATGAGAAACCACAAGCAAGCCAGATTTTAAGCGAACTAAGTCGGCCACATGGCTGCAAGCAAATTCAATGCATGATCTGCCAGTCGCAGCACTCAAAAATAGCCGATCTGCGATGTCACCTAATGTCCCATCAGTTCATTATCAGCTTGCCGCCGGAGAGAGAGAAAGATATTGTTAGCGTTTCCAAATCATTATATCCCGAATTAAGTGTTGCCCTGACCCGAGATAATTTAATATCCCGTATTATGAATGATATTGGTAAGGGTGTGGAACTAGAGAGATTCACATCCATTACGAATGAATCGGGCTTTGAACTCAGTTTGGATAGCAGCGAAACGGACTCGGACACCGATGAAGAGGATGCTAAAGCGGATAGCCAAAAAATTAATCGCTATATTTGCTCCATTTGCCAAGTGGAAGTGAAGAGAAAGCATCAGTTATATGCCCATCAATTGGATCACCATCCGTGTGCAGAGGCCGCCACCAATGTGTGCCCGCATTGTCAAGCAAGATTTGTGAGTGAGCAACTTCTCGATCATCATCTGAAGTCGCAGTGCCGAAATAACCATAAACGGCATCAATGTCGAAAGTGCACATGGCGCTTCCGTTGGCGGGAGAATCTCAAGCTCCATAACAATGTATGCCATCAAGCAGATGATTCTGCGTTGGGCCCAGACGGTGGAGAACTGCGTTGCAAGGAATGTCATCGAACCTTTAAAATGCAAAAGGATTTGACTCGTCACATGCTTATGCACTCGGATACGAGTATTTATCGTTGTCGTTGGTGTGCCCGTCGTTTCTATCGTCGGGCCAATCTTCTACAGCATATCGAACGACATGGCATCAGTGCCGATCAATTGCCTTATGCCGAATCTCTTCTTAATTCATATAATCATCCGCATGGTCAGAAAATCATTCAATGTAAAGTGTGTAACATAAACTTTAACTCAATCACTGGGCTGCGACATCACTTGAAGTCCTCTCCCAATGAGTCGCATCATGAACTTAGTTCCATGCAAAATTACTCGATTACCAATCATTTGGGCTATGAACTGAATTTGGACGACTCGGAGACGGATGACGAGGAAATCAAATCTGGAGGCAGTAATGAAATCTATACTTGCAGCATGTGCCACTTGCGTTGTGCAAGGAAATACGAACTCTATCAACATCAACAGGCCATGCATAGGTTAGAACGTATCCCCGATGGCTGCGATCAGTGCATTTTTAAGAGCGTATCTTCTGACATCATCGAACATCATAAGCGTAATCAGTGCGAGAATCAGGAGAAAACTTTCAAGTGCATTAAATGCGGCTTCAAATTCATGTGGGAATCGAATATGTTAATCCATATGGAACTGCAACATCAGAAAACCGAAGAGGAAGAACAAACGCAGGAACAACAAACTGTGGAGCCAACAACGGATTCAGTTAATAATTCGTCGTCAAATTCCAAACAAATGCAACAAATCTTCCAGTGTGCTCTTTGCCCCAGAAAATACAATCGCAAGGATCGCCTCACGGCGCATATGAAAAAGTTGCACAATCCAAGTGGACCCAGCACCACATCAGGCGCTAGCCAGTCTTCTACTACGTCAAAGAAATCTTCTGCGGCAGCATCTACATCAACTTTAGCTTCTGCTGCCAAACAACCGAAACTATTTCTCTGTGCCTTCTGTGGCAAGGCAGTGAGTTCCTCGTCCAATCTTATCATTCACATGCGACGACACACTGGAGAAAAACCCTTCAAATGCGATTTCTGTGAAATGGCCTTTCCACGTTCCTCGGATCTGCAGTGTCATCGGCGAACACATACGGGCGAGCGTCCTCATGTGTGTACAGTGTGCCAGAAAGGTTTCGCCAGATCCTATAAATTGCAGCAGCATATGCGCATCCACAATGGGGAACGACCCTACAAGTGCACCTATTGCGAGAAGAGTTTCACGCAATCCAACGATTTGACACTACATATACGCCGGCACACCGGCGAGCGGCCCTATCAGTGTGGCATTTGTGGTGAGAGATTTATTCAGGGTACTGCCCTAAAGAATCATCGTCAACAGCAGGGGCATCATGAACCAGGCGCTCCGGGTGGCCTGCCCGGAGAGGCGCCCATAAGGCGCACAGTTCTTCAGCAATTTTCAGGCGAATGA
Protein Sequence
MLPSDICRTCATQNNNLLPLASCSEKLQELTQIPLLELIGDENLPQHLCGDCLAKLENAYAFVEQARKVNRDLLMKLRQCLLEETPIDIPIPNAMQHQIKMEMDDEDGDQPELDEEETAATRLELKWHADSDAESEAEEEEAADGNEDEYKPYQPRRSLRKIKQQSDSEQESQEHEEEKINLSHEKNDPEPPPKRRRGRPPRLAKTLALNSDGRHVCAECGKTFSWYRDMQRHARSHFEEAAFNCSQCGKGFLRKDKYMSHLKSHEKRQAKRENVELSKEWIFAERLYSSEQLKLIECKLCGVQFERLGDLRSHVELHSSKETLGQLQLDQEVVKEHFADENIDLEKVKDLITHDISERHLEKFCAVVNSNGYELSLSDSDEDLPPDIEPKYHCVLCNVPFKRKHLLIRHTVEEHSKGHNQPQLRCNLCQIGFVCLNLYEQHQRSQCYGKFKRYGCRKCPGKFMWLENLDKHECVQSREEDKQILCCLCDAQLPSLVQLRAHLLSHRDGLTGIDPLYQATFFRCYYPKGLACSQSELSSRIVGDFDAQDYGRYYNASLSSGQELDFYDSDSDESDAPGESQEKPLHTCTLCGESMKRLTNLMEHQQNCHQDENESFTYSCKDCSERFVCDALLLQHRRRSCGKSHAKFHCQLCQMHFVWQTNYEQHLRVNHPSEKDLDQNIKRKPAAAPSARLQCNECDKVFIWPKDLNRHKRMHQPRTASQYECTHCERKFHRKDGLKSHMRVHSEEMQQLEKIDNDEHDEKPQASQILSELSRPHGCKQIQCMICQSQHSKIADLRCHLMSHQFIISLPPEREKDIVSVSKSLYPELSVALTRDNLISRIMNDIGKGVELERFTSITNESGFELSLDSSETDSDTDEEDAKADSQKINRYICSICQVEVKRKHQLYAHQLDHHPCAEAATNVCPHCQARFVSEQLLDHHLKSQCRNNHKRHQCRKCTWRFRWRENLKLHNNVCHQADDSALGPDGGELRCKECHRTFKMQKDLTRHMLMHSDTSIYRCRWCARRFYRRANLLQHIERHGISADQLPYAESLLNSYNHPHGQKIIQCKVCNINFNSITGLRHHLKSSPNESHHELSSMQNYSITNHLGYELNLDDSETDDEEIKSGGSNEIYTCSMCHLRCARKYELYQHQQAMHRLERIPDGCDQCIFKSVSSDIIEHHKRNQCENQEKTFKCIKCGFKFMWESNMLIHMELQHQKTEEEEQTQEQQTVEPTTDSVNNSSSNSKQMQQIFQCALCPRKYNRKDRLTAHMKKLHNPSGPSTTSGASQSSTTSKKSSAAASTSTLASAAKQPKLFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDFCEMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGICGERFIQGTALKNHRQQQGHHEPGAPGGLPGEAPIRRTVLQQFSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00612227;
90% Identity
iTF_00612227;
80% Identity
-