Basic Information

Insect: Drosophila paulistorum
Gene Symbol: kipf
Assembly: GCA_018152135.1
Location: JAECXG010000690.1:6974604-6979575[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0012 0.091 13.3 2.0 1 23 156 179 156 179 0.96

2 25 5.8e-05 0.0045 17.5 3.0 1 23 185 207 185 207 0.98

3 25 0.00028 0.022 15.3 0.1 1 23 213 235 213 235 0.97

4 25 0.11 8.2 7.2 2.8 1 23 241 264 241 264 0.97

5 25 0.00052 0.041 14.5 5.8 1 23 293 315 293 315 0.97

6 25 0.22 17 6.2 4.0 1 23 322 346 322 346 0.95

7 25 2.2e-05 0.0017 18.8 3.2 1 23 352 375 352 375 0.96

8 25 0.0018 0.14 12.8 4.4 2 23 381 403 380 403 0.94

9 25 0.011 0.89 10.2 4.0 1 23 535 558 535 559 0.95

10 25 0.022 1.7 9.3 3.1 1 23 617 639 617 639 0.98

11 25 0.0014 0.11 13.1 0.3 2 23 644 665 643 665 0.92

12 25 2e-06 0.00015 22.1 3.2 1 23 670 692 670 692 0.99

13 25 0.00043 0.034 14.7 3.2 1 23 696 719 696 719 0.97

14 25 7.8e-07 6.1e-05 23.3 1.7 1 23 725 747 725 747 0.98

15 25 0.00058 0.045 14.3 3.4 1 23 753 775 753 776 0.96

16 25 0.15 12 6.7 2.3 1 23 787 810 787 810 0.96

17 25 6e-05 0.0047 17.4 1.2 1 23 877 899 877 899 0.98

18 25 0.0014 0.11 13.1 0.9 1 23 905 928 905 928 0.96

19 25 0.0068 0.53 10.9 1.3 1 23 1023 1046 1023 1046 0.95

20 25 7.8e-05 0.0061 17.0 0.5 2 23 1132 1153 1131 1153 0.96

21 25 2.4e-06 0.00019 21.8 1.0 1 23 1157 1179 1157 1179 0.98

22 25 0.00036 0.028 15.0 2.5 1 23 1209 1232 1209 1232 0.96

23 25 5.2e-06 0.0004 20.8 0.6 2 23 1321 1342 1321 1342 0.97

24 25 3.1e-06 0.00024 21.4 1.4 1 23 1348 1370 1348 1370 0.98

25 25 0.011 0.82 10.3 2.3 1 23 1375 1398 1375 1398 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0012	0.091	13.3	2.0	1	23	156	179	156	179	0.96
2	25	5.8e-05	0.0045	17.5	3.0	1	23	185	207	185	207	0.98
3	25	0.00028	0.022	15.3	0.1	1	23	213	235	213	235	0.97
4	25	0.11	8.2	7.2	2.8	1	23	241	264	241	264	0.97
5	25	0.00052	0.041	14.5	5.8	1	23	293	315	293	315	0.97
6	25	0.22	17	6.2	4.0	1	23	322	346	322	346	0.95
7	25	2.2e-05	0.0017	18.8	3.2	1	23	352	375	352	375	0.96
8	25	0.0018	0.14	12.8	4.4	2	23	381	403	380	403	0.94
9	25	0.011	0.89	10.2	4.0	1	23	535	558	535	559	0.95
10	25	0.022	1.7	9.3	3.1	1	23	617	639	617	639	0.98
11	25	0.0014	0.11	13.1	0.3	2	23	644	665	643	665	0.92
12	25	2e-06	0.00015	22.1	3.2	1	23	670	692	670	692	0.99
13	25	0.00043	0.034	14.7	3.2	1	23	696	719	696	719	0.97
14	25	7.8e-07	6.1e-05	23.3	1.7	1	23	725	747	725	747	0.98
15	25	0.00058	0.045	14.3	3.4	1	23	753	775	753	776	0.96
16	25	0.15	12	6.7	2.3	1	23	787	810	787	810	0.96
17	25	6e-05	0.0047	17.4	1.2	1	23	877	899	877	899	0.98
18	25	0.0014	0.11	13.1	0.9	1	23	905	928	905	928	0.96
19	25	0.0068	0.53	10.9	1.3	1	23	1023	1046	1023	1046	0.95
20	25	7.8e-05	0.0061	17.0	0.5	2	23	1132	1153	1131	1153	0.96
21	25	2.4e-06	0.00019	21.8	1.0	1	23	1157	1179	1157	1179	0.98
22	25	0.00036	0.028	15.0	2.5	1	23	1209	1232	1209	1232	0.96
23	25	5.2e-06	0.0004	20.8	0.6	2	23	1321	1342	1321	1342	0.97
24	25	3.1e-06	0.00024	21.4	1.4	1	23	1348	1370	1348	1370	0.98
25	25	0.011	0.82	10.3	2.3	1	23	1375	1398	1375	1398	0.91

Sequence Information

Coding Sequence: ATGGAGAATGTTTGTCGGGTTTGTAGGGATGGGTCAGTCACATTGGTGGACATATTCAATGGACTGGACGCCGATGAGGACCATGAGAAAAATTTAGCCTATATCCTGAGCCAGTGTACTAACTGCCAGGTTAATCGCGATGACTTATTACCGAAACAAATATGCTTATCCTGTGTCCTGGCTGCACAAAATGCATTCCGCTTCAAGAAGACATGCGAACAAAGCCATCAATTCTTTTGCGAAATCCTTGAGATGAGATGGCAAACTATGCATAGAAGTCAAGCGGAGGAGTTGGTTTTCAATGATGATAATGTGCACATGGCAGGTGGTCTGCATGTCATCGATGTGAGCTGCATTAAATTGGAGCCGATATCAGAGCTCCAGGAAAGCGCCATGCCGGAGGATGTGCCAATGGAAATTCCTTCCACCGAGGAGCAGGACCACACTATTGACGAGGTGTTCTCACATATGTGTCAGTACTGCACCCAAGGATTTCGTGCCTCGTATGAGCTGAACAATCACATTCAGAGTCGCCATACAACTGAACGTCCATTTGAGTGTCCCCAGTGCCACAAGAAGTTTGCTACAGTGAACTATCTGAGGAATCACACTCGGCTCCATAAGGGACAGCGTCCTTATAAATGTCCACGTTGCCCTGAAGAGTTCACCCTGTGGAGCAGTATAAAGGCTCATATTAGTGAGCATGATGGTATTAAACTATTTTATTGTGACCAATGTGCAGCCTCGTTCCGGGAGCACTTTGACCTGCGCATGCACAAGCAAATGAAGCATCGCACCAGCAATACAAAGGCTAACACTCAACCGATGGAGAAACCCTATGATAATTTGCCCAATGCGGTCCTTGACAATGCCAATTATTGCTGTGAGATATGTAAAAAGACCTTTAAATATAGATACGCCTATAGAAATCATAAGCGTGCCCACATGAGAGCACGACGAACCCACCACTGTTCTTATTCAAAGTGCTCACAAGCCTTTGAAACTGAACTTAAGCTCAGGCAACACATTCTTACTCATAGATCCGATTGGCCACATCAATGCAAAGAGTGTGCTAAGGGCTTCTATAAAAAAAGCCAGCTAAATAATCACATGAGAGAGAATCACAGTGGCGATCGACTTGAATGTTCACATTGCCGGCAGAAATTTGCAAGCAAAGGAAGCTTAAAACATCACATTAGCAACTTTCATTCAGAAGATTTTCAGCATCTATCAACAGCACCTCAAATGGAACAAGCTAACGATCACCAGAGGCCCATAAAAACGGAAATTCCAGACAGCGATTCACCTGAAGAATCTCTTCTAGTGGAGCAAATCCAAAACAGAAATTCACCTCATGAATCTCTTCTAGTGGAGCAAATACAAAACAGAAATTCACCTCATGAATCTCTTCTAGTGGAGCAAATCCTACCAGATCAAGAATACGAATGTCCTGAACCAACTCCTCCAATAGTTGCTCAAATTCTCTATGGATCTGAACAAACGAGGACTTCCAATGGACCAGCAAAACCTGCAAAGCAACAAAAGCCGAAGAAAAAAGCAAAGGCCAAGCAGCCAATCCACAAACCCAAAGGAATGATAAATCATCGTTGTAGATGGTGTCCAATAGCTTTCCGAGATCAACGTAAAATGATGCAGCATATGCAGCAGAAACACCATAGACGCCTAATGGAAAGCTCGATCCTTGAGCAGGCTAATGAGCCAGAGACAAACCAAAAAGAGCCAGAGATTACTATTCAAAGAAACCTTACCGAAAATGAGATAAAAGAAGAAATTGATCCAGAACCAACTGAGAAGAGCATCTCAATATCTGAAAAATCGACGAAGGCTCACAAGTGTGGTGTATGTGGAGAGACATTTATGGCAAGATTCAAATATATTCAACATATTCATACACACAAGCCACCTTTAAACTGTAAAGAGTGCTCAAAACCATTCAATTCATACGCTCAGCTCAGAATACATTCGATTCTTCACAGGGGCGTGCGTTTCCAATGTACTCACTGTCCAAATTCCTATTCACGAAAAGATAATCTGGCAAAACATATGACCACACACAAGTTCTCACATGTGTGTCAGTACTGCAGCAAAAGATATCGTGGAACTTATGAGCTAAACAATCACATTCGGAGTCGCCATACAAGTGCACGTCCATTTGAATGCCCCCATTGCCCCAAGAAATTTGCTACCACGGAGTATCTTACGAAACACATTCGGCTCCATACGGGAGAGCGTCCTTATAAATGCACACATTGCCCTAAGTCCTACCCCTGGTCGAGCAGTCTAAGTGGTCATATTCGTAAGCATCATGGTAACCGCCGTAACTTAAGTACCAAACTATTTCGATGCAATCAGTGCTTAGCATCCTTCCGGGAGTACTTTAAGCTGTGGATGCACAAGCGATTGAAGCATCGCATCAATGATAGCTTGGCTAAGGCTAAATCATTGAGAAAACTCAAACGGTCATCAACCAATTGTCCCGGAATTAACAGCTCCATTGTTAGTTTGCCCAATTTGGTCCTTGAGGAGGGTAACGTAAAAATAAAGAAAGAACTTGCTGAAGAGGATACTGACCCGACAAACAATCAATCCCAACAGCCAAAGACTAATTATTCCTGTGAATTATGTGACAAGAAATTTAAATATGGTTACGCCTATAACAATCATATGCGTGCCCATATGAGACGACCACAATTTAAATGTTCCCAATGCCCGCGAAGATTTGTAAGCAAACAAAGTCGAAATCTTCACATTAGCATAGTTCATTCAGCGGACTTTCAAGATCTATCCAAAGGACAAACTAACGACGAGCAAAAGTCGATAAAAACTGAAGTTCCGGACAGGAATTCACCTCATGAATCCCTTTTAGTGGAGCAAATCCTACCAGATCAAGACTACAAATGTCCCGATCCAACTCCAACTCACATTCTTTATGGACATAAACAATCGGGGAGTTCCAATGGGCCGGCAAAACCTGCAAAGCAACGGAAGCCGAAGAAAAAAGCAAAGGCCAAACAAACAATGTACAAACCCAAAGGAATGATAAGTTATCGCTGTAGATGGTGTCCAATAGCTTTCCGAGAACAACATAAAATGATGCAGCATATGGAGCTGAAACACAAAAAGCGCTTAATGGAGAGCTCGATCGATAAACAGGTTATAGAGCCGAAGACAAACCAAAAAGGTCCAGTGATTCCTTCCCAAACGAAGCTTACCGAAATTGAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATACCTAATAAATTTGCAAAGACTCATAAGTGCAGTGCGTGTGGAGACATATTTACGGCAAGATTGAAATATGTTCAACATATTCACTCACACCAACCGCCTTTAAATTGTAAAGATTGCCCAAAACAATTCAACTCATATGCTCAGCTCAGAGTGCATGCAAAGTCACATAGCGTGCGTTTCCAATGTGCTTATTGTCCAAATTCCTATTCGCGTAAAGAAAATTTGACTAAACATATGGACATGCACAAAAAAAAGGGGGATATTATCCAGTCACCAGACAATACCGATACAGATCCAGTTGAGGATGAGATGTTGGGACAACCGAAGTCCGAATTTATCTGTGAATTGTGCTCCAAATCATTTGAACATGAATATAACCTAAGGCTTCATAAGCTCATGAAGCACGGCATTAAAGACGAAGAGGAGCAGGAGGAGGAGTTAATCTTAGATCATCAACAGGTGAATTTTGGGTTAGATCATGAAACAAATATATCACTGCGAAATAGACCTGGGGCAGGTGCATACGAAGAGCTCGAAATCGAGGATAGCGATATGGAAAAGCGGAAAAACCTTGACAGTAAAAAGGAAATCTTAAATTCAAACCCAATATTTATACCACAGACAGACATTCAATTACCGAATGACGAGAAAAATATGACAAAACGTAATGTTTGCCCGTACTGTTTGAAGCGTTACGTACGGAAAGAGAGCCTAACTGTGCATATGCGACGCCATACTGGCGAAAGGCCGTACAAATGCCCCTACTGCGTGATGACTTTCAGTTCAAATGACTCCTACAAACGACACCTCCGAGGACATACGGGAGATCTCTTCCGTTGTGATAAATGCCCAAAGGTTTACAAGGGTCGCTCTGATTTGCGATTTCATAAAAATCAGAAACATAAGGTTCCCAAAGAGGAGCCCATAGTATTAACAAAACATTTAATTGTACGTTTGAAAAGAATTAAACTACCAGTCAGTGTTAAGGTAGAGCCGATTCCCTAA
Protein Sequence: MENVCRVCRDGSVTLVDIFNGLDADEDHEKNLAYILSQCTNCQVNRDDLLPKQICLSCVLAAQNAFRFKKTCEQSHQFFCEILEMRWQTMHRSQAEELVFNDDNVHMAGGLHVIDVSCIKLEPISELQESAMPEDVPMEIPSTEEQDHTIDEVFSHMCQYCTQGFRASYELNNHIQSRHTTERPFECPQCHKKFATVNYLRNHTRLHKGQRPYKCPRCPEEFTLWSSIKAHISEHDGIKLFYCDQCAASFREHFDLRMHKQMKHRTSNTKANTQPMEKPYDNLPNAVLDNANYCCEICKKTFKYRYAYRNHKRAHMRARRTHHCSYSKCSQAFETELKLRQHILTHRSDWPHQCKECAKGFYKKSQLNNHMRENHSGDRLECSHCRQKFASKGSLKHHISNFHSEDFQHLSTAPQMEQANDHQRPIKTEIPDSDSPEESLLVEQIQNRNSPHESLLVEQIQNRNSPHESLLVEQILPDQEYECPEPTPPIVAQILYGSEQTRTSNGPAKPAKQQKPKKKAKAKQPIHKPKGMINHRCRWCPIAFRDQRKMMQHMQQKHHRRLMESSILEQANEPETNQKEPEITIQRNLTENEIKEEIDPEPTEKSISISEKSTKAHKCGVCGETFMARFKYIQHIHTHKPPLNCKECSKPFNSYAQLRIHSILHRGVRFQCTHCPNSYSRKDNLAKHMTTHKFSHVCQYCSKRYRGTYELNNHIRSRHTSARPFECPHCPKKFATTEYLTKHIRLHTGERPYKCTHCPKSYPWSSSLSGHIRKHHGNRRNLSTKLFRCNQCLASFREYFKLWMHKRLKHRINDSLAKAKSLRKLKRSSTNCPGINSSIVSLPNLVLEEGNVKIKKELAEEDTDPTNNQSQQPKTNYSCELCDKKFKYGYAYNNHMRAHMRRPQFKCSQCPRRFVSKQSRNLHISIVHSADFQDLSKGQTNDEQKSIKTEVPDRNSPHESLLVEQILPDQDYKCPDPTPTHILYGHKQSGSSNGPAKPAKQRKPKKKAKAKQTMYKPKGMISYRCRWCPIAFREQHKMMQHMELKHKKRLMESSIDKQVIEPKTNQKGPVIPSQTKLTEIEIXXXXXXXXXXXXXSIPNKFAKTHKCSACGDIFTARLKYVQHIHSHQPPLNCKDCPKQFNSYAQLRVHAKSHSVRFQCAYCPNSYSRKENLTKHMDMHKKKGDIIQSPDNTDTDPVEDEMLGQPKSEFICELCSKSFEHEYNLRLHKLMKHGIKDEEEQEEELILDHQQVNFGLDHETNISLRNRPGAGAYEELEIEDSDMEKRKNLDSKKEILNSNPIFIPQTDIQLPNDEKNMTKRNVCPYCLKRYVRKESLTVHMRRHTGERPYKCPYCVMTFSSNDSYKRHLRGHTGDLFRCDKCPKVYKGRSDLRFHKNQKHKVPKEEPIVLTKHLIVRLKRIKLPVSVKVEPIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00618565;
90% Identity: -
80% Identity: -