Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_018152135.1
Location
JAECXG010000821.1:23472086-23475303[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.2 6.9e+03 -2.6 0.2 6 18 27 38 24 44 0.55
2 3 1.7e-07 0.00019 21.5 0.0 4 38 306 343 303 344 0.86
3 3 9.3e-09 1e-05 25.6 0.2 3 44 399 445 397 446 0.82

Sequence Information

Coding Sequence
ATGAAGCTGCATGATTGGAGACTTTGGCCTAGCTGCCTATTGCTGCTTGTGATATCGCAAACGAGTCATGCATGGCACTCTGAGGAGCTGGAGATCTTTGATCTGGTCGAGGAGGTCAACAAGAATTTCTACGAGTTTATGGGCATCAATCAGACAGCCACGAATAATGAGATCAAAAGGGCCTTCCGTACTCTCTCGATTGTTCTACATCCGGATAAGAATTCTGCCGAGGACGCCAATATCCAGTTCCGCAACCTCGTGTCCATCTATGAGGTGTTGAAGGACGCGTCGAAGCGGGAAAAGTACGACAAGGTGCTCCGAGATGGAATGCCTAATTGGAAGTCAGCTCTTTACTATTACCGCCGGATGCGAAAGATTGGCTTGTACGAGGGAGCCTTCATTCTTTTCCTAATTACCACCGTGGGCCAGTACCTGTTTGCGTGGGCCGCCTATCTGGAGAAGAAATACACGGCGGAGCAGGTATTTGGCACCAAACTAAAGAAGCTGCAAAAAAAGAACAAAAACATTGACATGGACGTCATTTTAAGTGAGATTCCCATGCCATCACTTCTGAACACGCTACCGATTCAAATACCTCTGGCCATATGGAATCTACCCAAGACCATCAAGAACGGCTTCAGTAAGGCAAACGAACTCAAGGAATTGGCCCTGGAAAAGAGAAGGCAGGAAATCGAGACGGCTCGCCGCCAGGAGGAACTTGAACGGGAGGCTGAAGAGCAGGTTCGGCTGCGCAAAGAGCAGAAAGAAAATCTGCGTAAACGCAAACAAAATACTACAGCGCCCGTTAAAACCGAAGAAGAGCTACGTGGCTATTCCCAAATCCAGGCTCGTGAGCTCACCGAAGATGATGCCATTCGTCCTGCCATTCAAAAGAGCACTGTCAGCGGTGGCTTTTGGACAGACGAGGATCTCACTGAACTAATACGTTTGGTTAAAAAGTATCCAGGAGGTGCCGGCAGTCGTTGGAACACCATTGCCGAGTCCATGAATCGTTCTGTCCAGGAAGTTACCTTCATGGCTGCCAAGATGAAGGAAAACGGATATCGCATACCAGGACAGGCCGATTCCGGCAATTCATCCGCCGACCAGTTACGCGTACAGGAAAAGACGAAAGTGAAGTCAACGGCTTCCTCTTCTGGTTCGGGTGAGAAGAGCATGCTTATACCAGAAACAAACTGGACGCAAGAACAACAGCGGGCTTTGGAAGCAGCCATCGTGAAGTATCGGAAAACGACTGGTGGTGATCGTTGGCAAAAAATTGCCAATAGTGTGCCGGAAAAAACTAAGGATGAGTGTCTGGTACGCTATAGGTACCTTTGCGAACTGGTCAAGACCCAAAAGAAAGCCGAAGAGGAAGCGAACATGGAGATTAACGAAACCCCCACCGAGGAACTTCCAGCAACTTCTGCGACGGATAGTGACCAACCATTGCCAGCCTCAGATCCAGATCCAGATCCGCCAGCGCCCAAAAAGTTGAGCAAACGTGAGCAAAGGAGACGAAAACGAGATCTCTCCAGTGGCGAGGACTCGGACGATGCCTATCAATACGAAATCAGCTAA
Protein Sequence
MKLHDWRLWPSCLLLLVISQTSHAWHSEELEIFDLVEEVNKNFYEFMGINQTATNNEIKRAFRTLSIVLHPDKNSAEDANIQFRNLVSIYEVLKDASKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFILFLITTVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPMPSLLNTLPIQIPLAIWNLPKTIKNGFSKANELKELALEKRRQEIETARRQEELEREAEEQVRLRKEQKENLRKRKQNTTAPVKTEEELRGYSQIQARELTEDDAIRPAIQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKENGYRIPGQADSGNSSADQLRVQEKTKVKSTASSSGSGEKSMLIPETNWTQEQQRALEAAIVKYRKTTGGDRWQKIANSVPEKTKDECLVRYRYLCELVKTQKKAEEEANMEINETPTEELPATSATDSDQPLPASDPDPDPPAPKKLSKREQRRRKRDLSSGEDSDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00523625;
80% Identity
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