Dpau007946.1
Basic Information
- Insect
- Drosophila paulistorum
- Gene Symbol
- fru
- Assembly
- GCA_018152135.1
- Location
- JAECXG010000822.1:41500878-41504172[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-12 1.2e-08 34.7 0.1 1 44 425 468 425 469 0.91 2 2 2.3 5.4e+03 -2.7 0.9 4 20 561 576 561 576 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGTGGCGGAGGCGGTGGTGCCACTCCCGTAGCAGCCAGCAGTGAGGGTGGCCAAACCTATTGCCTTCGCTGGAATAATCATCAAACGAATTTGGTACAAATCCTTCATGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACTTTGGTTGTGGATGATGAACAATTTAAGGCCCATCGTGTCGTATTGGCCGCCAATTCGCCATATTTTCAACATATATTACAAGATGTTCCACAAGATCATTGTAGCATTATATTGCCAGGTGTCAAGGGTTTTGAGATTGCTGCCCTTTTGCAATATATGTATACGGGTGAGACGACAGTTACCAAGAGTCAGGAGCCCGAAATTTTACGTACAGCCAAGGAGCTGCAGGTGAAGGGTCTCTATGATAATTTGATGAAATTCAATAATAATAAGCCAACAAGTGCAGCAACATCGGCAGATGAGCGTGTCCATTATGGTCATGGCAATAGCATAGCTCCAACTTCTAGTTCCGGTGGTTCGGGTGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTACACATATCTCACCCAGTGCCGCCATTTCGAGCAGCTGCTCGCCCCCACCGCCAGCATTTGGTGCCTATCAGCAGCCACCGTATTCGAATTATGGTCCATCAGGAGCAAGTCATCCCTCACATATTCCAGCCGGCGAGACTCCATTAACTCCCACCCATGCCACTCCACATGCTGCAGCCGGTGAGGCTGGTCAATGGCCACTATCTCCATCAGCTGCCGCTGCTGCCATGTTGAATTCCGTATATGAGTCTGCTGCCGATATGAATCCTCTTAAGCGTAAAAAACTCTCGGCCATATCTAGTATGTTGCTCAATAGTACGCGAGATACACCCATTTTGCGTAATGTTTTGGCCCAGGCTAATCCAGCTGACTCGTCACAACAGCAACCGAATCCCTTGCTCCTGAAGAGTTCCTCATCATCCTCATTGGCAGAGAAGTCGACACCCCATCAGAGTGGTGGCGGTGTCGGAAACCTTGGCGGCGGTGGAGGCACCGGTAGCCACAGTTTCAACGGCTCCGACTATGGCGGTGATAAGGAACCCCTCTCTCCACACACAGATCGCTCATTCGATGAGGAGACGGGAGGTCCTGGGGGCAAGAAACCGGAATGGAAACGCTACAAGCAATATACCCGAGCTGACATGATGTGCGCCATTCAAGCTGTACGCGAGGGCATGAGCGCTTTGCAGGCGAGTCGTAAATATGGATTGCCCAGTCGAACGCTCTATGATAAGGTGCGCAAGCTAAATATCACCACAGGCCGGGGAACACATCGCACTCCCAAGCGTAGTCCACCTGGAGTGGAATCTTCGGCTGCCTTCCCCTATTCCGCTGCGGCAGCAGCTGCTGCGGCCCACAATTATGGTCAGTCTGAGCTGCTGGAACGCAGTGAGCAGGTCAAGGATCATCATCCTCATCATGGCATGCCACCAACTATATCCCATTCGGCAGCTGCCCTCCTGGATCATGCATTCCTCCAGCAGGCCCTGGAGAATCGTGGCGGTGACATGGCCGGACGTGAAGCTCTCCATGCCATGGCATTGGCTGCAGCTGCTCATGCAGCAGCCAATCGTATGTCCACCAGTCCCCCGGGCTCGGGTTCGAATGGTCATCCACATGGATCCGCAAGATCACGTAGTCCCAGCCCCAGTCCACAGCATTATCCCGAGGATCTGGAAATGCACGAGACCAAACATCACGAGCGTCTAATCAAACGTGAACGGGAGCAGGATGAGCGTGAAGATGTTGATGCTGACGATGAAGAGGATCAGGATCATGATCATGTTGAAGATCTATCATTGGCACGTAAGGAACGACCCGAATCACCATATTCCCCACCGCCGCCAAGGGCATCATCGCCCCTGGAGGGAGCCAGTGTCATAATGCATCACTCATCGAATTCCACCTCAACCAACGGCAAAGAGCACGAGGATTATCCCAATTCGGCACAATCATCGCCACCACCGCCGCCACCTCCATTGCCTCTCGGTTTGGGCCTTAAACGTGAGCTCTTGGGCAACGATGAAATGCAAACACGCACAGACTGA
- Protein Sequence
- MGGGGGGGATPVAASSEGGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNNNKPTSAATSADERVHYGHGNSIAPTSSSGGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTHISPSAAISSSCSPPPPAFGAYQQPPYSNYGPSGASHPSHIPAGETPLTPTHATPHAAAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQQQPNPLLLKSSSSSSLAEKSTPHQSGGGVGNLGGGGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGQSELLERSEQVKDHHPHHGMPPTISHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPPGSGSNGHPHGSARSRSPSPSPQHYPEDLEMHETKHHERLIKREREQDEREDVDADDEEDQDHDHVEDLSLARKERPESPYSPPPPRASSPLEGASVIMHHSSNSTSTNGKEHEDYPNSAQSSPPPPPPPLPLGLGLKRELLGNDEMQTRTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501130;
- 90% Identity
- iTF_00571245; iTF_00618495; iTF_00618323;
- 80% Identity
- iTF_00571245;