Basic Information

Gene Symbol
Npdc1
Assembly
GCA_018152135.1
Location
JAECXG010000822.1:37572291-37585064[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-08 9.3e-05 22.4 15.8 9 57 274 322 268 328 0.93
2 2 3.4 3.4e+03 -1.8 2.5 20 36 420 436 417 442 0.58

Sequence Information

Coding Sequence
ATGGAGACTTCTGCAGACATAACAGATATATCATTTGCCGATTTTGAGACAAAAACAACTGAGGAAAATGAGTGCTACGAGGAAGACTGGAGGCACCTTAAATTGCAGAAAGCAGAGAATATATTTGCGTCCGACCAGACACCAACTCCCACGCGGCTGATCAAAAACTGCGATGAAGTAGGGCTGTTTGAGGACTTAAACCCATTTGATTTGGGCTTCCAGCGTGCCACAGAGCAGAATGTAAGTGGTACAGAGAGTCGCACAAAGCCAGTGGCCAACGATGGTGATTCCCTGCACACGCCTCAAGTGTATGCTGTGGATCCGCCACCAGTTGCAGTGGAAGCAGCAGCAGTAAACGATGCTCCAAATGAGAGCAGTGCCCTGGATGTAGAGCAGTTACTGGCCACAACATCGGTGGCAGCTCCTATACCTTTGGAGGGACCGCCTCCCTTACAGTTGATTCAACCGCAAGTAATCACTTGGGTTTTGCCACCGCAGTCACTGGGCATAACAACAGAAGTTTCCAAAGTTAGAAAATCATCGGCATCTGCTTCAACTAATACCATTCCCGCCCAAACTGTGCGTCCCTACATATTGCCGAAGCCCAGCTCGGCACCAGTAGCCCATAAACTGCCATTGCCACCATTAATCGCCCCAAATCCACCACCACCTGAGCCCAGCAGTGCCAGCCTCACGCCAACATCACAATTACCTATTAAAGAGCGTCTAAAGGCTATAATTCATAGCAACAACAATAAGCGTACCTTTGTGCCGCCATCTAAAACCGTAAAAACCAAACCCCATCGGGATGAGGATTGTATGGAACGGCGACGGGCGGCGGCCACACGATATCGCAACAAGATGCGTAATGAGCACAAGGAATTGCGGCTGCAGAATGCGCAACTTCAGCAAGAGAATCAGGAATTGCGCGACAAGATTGCCAGACTAGAGAGAGAACTGCAGCAGCAGGACAAGAACAACAATCTGTCAGTGCCATCTAATCCCATACAAATTCCTGGCTCAGCTATTCACCTGGTCTTTAATGTTCCCAAAATGATAGTTCCCACATCTACAGGATTACGTCGTCGTCCCATTCAGCAGCCGGTGGCAATAGATCCTCAATATGAACAGGAATATGCTTTTCTAGCCCAGATGATGGAGCAGCATGCCCGACGACGACTCCAGCAGCAATTTGATCAGCAATTGCATGAGATCAATATGAAAATGGATCGTCAGAGGCAATTGTTGGAGCGGGAACGCTATCGCCAACGTCAGCAGGAGTTGCAGGTGGAGCGGGAGGCGGAAGAAGATGAATATGGCAATAATCTGGAGAATCAACAGTACGACCAATACGATAATGTGGAGGCGGAAGGCTACTATGGCAGTCCAATGGATGGAATGCCCGCTCAGGCGCCCATGCCTCCGATGCCCCCAATGCCCCCGATGCAATCGATTTATCTGCCAACCACACACTCGGAACGATTGGATGATAATATCAGGCGAAATAAAGCCCAAAAGGAGCGCATTCCATTCGCTGTGGGTCCCAACGATGCCCGCTTCTTTGACAATCCCAATGATCCTTCGGGTGAACTGGACTCTCGGGCTCTCGATGATTACGAGGAGTATGCTCCTCTTGAGCCAACAGTAGCTTCTGCCACACCACGTAGCAAAGTGGCCAGTCCAGTGTCCGCACCAGTTCCAGTCGAACCGCCAAAACTTTTAGATGCCTCCAATGCCAATTTCCATCGTATTAATCCCCAAACAGCAGCCGCTGCAGCCGTGGCTGGAGCCAGTGCATCCAATTCACATGAAATCAATGCTCTGATTGACAAACTGCAAAAGCAAAGCAAATCCTCACATCATCCGCAACTAACGATGGCCAATGGAGTTGCTGGGGGAGAGGCGGCCGAGCAAATTGTTCTCAGACAACATCTGGGCATGAATAGCGAAATGGGCGTCTATATAGTGGCCCTAATAGCGGGAGTTAGTGCAGCTGTTACCGTGGGATTGCTGGCCTTGGGAGTCACCTGGTTTCACAACCGCAGCAAGGCCGCCGCTGACGTAGATTATCCAGCATATGGTGTAACAGGACCCAATAAGGACGTTTCGCCGTCGGGCGATCGCAAGTTGGCCCAAAGTGCACAAATGTATCATTATCAGCATCAGAAGCAACAGATTATAGCCATGGAGAATTGTCAAGCGACCGATGGCAGTTGCGGCCTTTCGGATGTGGAGAGCGATGATGACAATGAAGAGGGTGACTACACGGTGTACGAGTGCCCCGGCTTGGCTCCCACTGGTGAAATGGAGGTTAAGAATCCACTCTTCCTAGACGAAACGCCAGCCACGCCGGCTAACAATTTGGCAAACAATTCGTCGTCGAACGGCCCATCGAATGGAACATCGGGAACGAATAACAATATAACTCAGGCCACACCCCAGCAACCGGCTACGGTGAAGAAGGGTTCGATCAAACCGAATATGAATCTATTGAATGCCGCCGCCTCGGCGGTAGCCAAAGAGGAGCAAAAGAAGCGCAAGAGTAAGAAGTAA
Protein Sequence
METSADITDISFADFETKTTEENECYEEDWRHLKLQKAENIFASDQTPTPTRLIKNCDEVGLFEDLNPFDLGFQRATEQNVSGTESRTKPVANDGDSLHTPQVYAVDPPPVAVEAAAVNDAPNESSALDVEQLLATTSVAAPIPLEGPPPLQLIQPQVITWVLPPQSLGITTEVSKVRKSSASASTNTIPAQTVRPYILPKPSSAPVAHKLPLPPLIAPNPPPPEPSSASLTPTSQLPIKERLKAIIHSNNNKRTFVPPSKTVKTKPHRDEDCMERRRAAATRYRNKMRNEHKELRLQNAQLQQENQELRDKIARLERELQQQDKNNNLSVPSNPIQIPGSAIHLVFNVPKMIVPTSTGLRRRPIQQPVAIDPQYEQEYAFLAQMMEQHARRRLQQQFDQQLHEINMKMDRQRQLLERERYRQRQQELQVEREAEEDEYGNNLENQQYDQYDNVEAEGYYGSPMDGMPAQAPMPPMPPMPPMQSIYLPTTHSERLDDNIRRNKAQKERIPFAVGPNDARFFDNPNDPSGELDSRALDDYEEYAPLEPTVASATPRSKVASPVSAPVPVEPPKLLDASNANFHRINPQTAAAAAVAGASASNSHEINALIDKLQKQSKSSHHPQLTMANGVAGGEAAEQIVLRQHLGMNSEMGVYIVALIAGVSAAVTVGLLALGVTWFHNRSKAAADVDYPAYGVTGPNKDVSPSGDRKLAQSAQMYHYQHQKQQIIAMENCQATDGSCGLSDVESDDDNEEGDYTVYECPGLAPTGEMEVKNPLFLDETPATPANNLANNSSSNGPSNGTSGTNNNITQATPQQPATVKKGSIKPNMNLLNAAASAVAKEEQKKRKSKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-