Basic Information

Insect: Drosophila paucipuncta
Gene Symbol: -
Assembly: GCA_035043875.1
Location: JAWNMP010000268.1:7616298-7629540[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.1 69 4.2 0.7 3 21 468 486 466 490 0.91

2 13 0.12 7.6 7.2 0.3 2 23 512 534 511 534 0.94

3 13 0.47 30 5.3 0.8 1 23 551 574 551 574 0.95

4 13 0.22 14 6.3 0.3 1 21 579 599 579 603 0.90

5 13 0.0071 0.46 11.0 0.1 2 23 653 675 652 675 0.95

6 13 0.34 22 5.7 0.2 1 21 680 700 680 701 0.92

7 13 0.0065 0.42 11.1 2.1 2 23 767 787 766 787 0.96

8 13 3.5e-05 0.0023 18.3 0.8 1 23 793 816 793 816 0.97

9 13 0.00029 0.019 15.3 0.4 1 23 842 864 842 864 0.98

10 13 1.6 1e+02 3.6 0.7 1 23 871 895 871 895 0.95

11 13 0.52 34 5.1 5.9 1 23 900 924 900 924 0.97

12 13 0.0052 0.34 11.4 1.4 2 23 938 959 937 959 0.96

13 13 0.0013 0.084 13.3 3.4 1 20 965 984 965 986 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.1	69	4.2	0.7	3	21	468	486	466	490	0.91
2	13	0.12	7.6	7.2	0.3	2	23	512	534	511	534	0.94
3	13	0.47	30	5.3	0.8	1	23	551	574	551	574	0.95
4	13	0.22	14	6.3	0.3	1	21	579	599	579	603	0.90
5	13	0.0071	0.46	11.0	0.1	2	23	653	675	652	675	0.95
6	13	0.34	22	5.7	0.2	1	21	680	700	680	701	0.92
7	13	0.0065	0.42	11.1	2.1	2	23	767	787	766	787	0.96
8	13	3.5e-05	0.0023	18.3	0.8	1	23	793	816	793	816	0.97
9	13	0.00029	0.019	15.3	0.4	1	23	842	864	842	864	0.98
10	13	1.6	1e+02	3.6	0.7	1	23	871	895	871	895	0.95
11	13	0.52	34	5.1	5.9	1	23	900	924	900	924	0.97
12	13	0.0052	0.34	11.4	1.4	2	23	938	959	937	959	0.96
13	13	0.0013	0.084	13.3	3.4	1	20	965	984	965	986	0.95

Sequence Information

Coding Sequence: ATGAACACCGAGTCGGCTGATCTGGAAGACACGCATTTGTGCATCAAGTGCAATGCAACAATTGTGGGTCTGAGCAAGTATATCGAGCACCGTAAACGGAGTTGCCTCAGCACTGGCGGCAATGAGCACCTGTCGAAGCAGGTGGTGACTCCGGCAACGATGTCGGCTGCCACCGAACAAGTAACGCACTCAGGCATGCGTCGCAGCAACTTGGACCACACCTATGACGGCTTCCACTTTGCAGAGCCGGAGGCACCCAGCAGTTATCTGCGCAAAACTGCCTCCAGTCATGGCGGAAAGACGTCCAAGTCCCTAACGGATTCCTATGATCCGACGTACGAGCTGGGTGCCGATCTGTTCTTCTCatcgctgcagctgcaaagTGTCTCAACTGGTGGCAAGACAGGTGCACGACCGGAGCGTGGCGCTAAGGAGGAGCAGAGCTGGCATACGTCCAGCAACTGCTCCGATCCGCTACTGAAAGCGGTCCGGGAACACGAAGTAACCCACTTTAAGCCACTCAAATTTGTGCACTCGCCCGAGGCAAGCGAGGAggaagacgacgacgaggacTTCGAgggcgatgatgatgagcatGAGCATGaacatgaaaatgaaaatgatccCGATCCCGATCCCGAGCCTGATGAGGATTACGATGGGCGTCGCCATTCGCCGCCGACGGTGCCAGCCACGCACACTGGTGGCAAATGGAAGCCAGAGCACCGTCCGCAACTGCAACACACTCACCTCGAACGCATCTCGCCCAGCTGGGATGAGCCGCCCGAGGAACAACACGATCATCCGCCGGCGGAGCACACGCACGGCAAATGGGTGCCGGGCAGCAAGCAGCTGGAGTATCGCGAGAACATCGATCTGAccaagctgcagcagccaggcGCCAGCTACTGGTGCAACATCTGCTGTCGCAGCCTCAAGACGCGCCTCAACTACGAGCAGCATCTGCACAGCGCCTACCATCAGCGGCGCGCCGATGCCGAGCGTCAACTGGAGCAGGCCAATCTCGCCAGCGCCAATCTAACACTCAGCACCAAGGACTTTCCACAGATGCCGCCGACGGAGCAGCTGCcgcggcgtcgtcgtcgtcgtgccCACTTTCTGCGCTGCGATCTGTGCCGGCACAGCATGCCCCGTCATCTGATGGGCAAGCATCTCATCTCGCACTATCACTATCgccggctgcagcagcagcaaccgaaCCAACAGCGCCGACAGAGCGCCCTGCATGACATCCTGGAGCACATGGGCAGCATTGTGAGACAGGCGCCATTCCAGTGTCTGCCCTGTCGCTTCTATGCCAACACTGAGCAATCTTTTCAGCTCCATTGGCGCTCCTCGGAGCACGTGACGCTGACGGAGCGACTTGGTGGCAGCTTCTGGTGCAGCTACTGCCAGTTCGAGTGTGCCAGCAATGAGGAGATGTGGCAACATTTGCTGGGCTCCACGCACAAGGAGGTGCTCTTTGCGATCAATCGTTCGGTGCCCGTTTGCATTGCCCAGCGTCGTCCACTGAGCTGTTCCAGCTGCAGCGCCAGTTTCCTGTACAATGCGCAGCTGCGTCGTCACCTCGCCTCGGAGCATGTGGAATTGGTGGCAGCGGGCAGCGCTGCCGATGACTATCAGTGTCGCTTTCGCTGTGGCAGTTGTGGCGTTGCGCAGAGATCTCGAGTGGCGCTGCAGCGGCACGAGAAGCACCAGCATCGATTGGCCAAATACTATTGTACCGTTTGTCGGCTGGAGTTCGAGACGCCGCTGGAGGCGCGACGCCATCGCAGCCTGATGCAGCACAAGCGGCGAGCTTGCCGCCAACTGAGccgcaaatgcagcagcagcagcagcagtaatcaGCCGGATCGCGAGATTCAACACATGCTGCACGAAGTGCTGGAGGAGCAGCCACCAGCCCTGAGTTCCAAGAGACGTCGCCTGGCCAGCCAGTGTGTCAGCTGTCCGCTCAGCTTTGAGACGCCTCAGGCACTCGTCCAGCATCGTCGCGAATTGCATCCGGTGGACAATCATGCCTGTCTCAGCTGTGGGAGTAGCTTTCAATCCGCCCAGGCTCTGGGAAGACACACGCGCTCCTGCCAGCTCACAGCGTCCACCtcgacagctgctgctgctcctgctgcagctccagctctagctgcaactgcaacatctGAATCAAAGTCCTGGAACTGTGCGCAGTGCAGTTTCACAGCTCAATACGAATCGGATTTGCTCTATCATCGCTTCTTTCACACCCACGGCTCGGCAATTGGCAAGAATGAGCTGCTCCAGTGTCCGCTGTGCCCCAAACAGTTTCGCAAGCACTCACTGCGTCCCCATCTGCGCAATCATACGGACGAAAGGATCTTCGAGTGCGTCGAGTGCTCGGCCAAGTTTGCCCGCCGACACAACCTCAAGAATCACATCGCAACAGTGCATGGCCGAAAGGAGAAACCATCGCCAGCTGCTGATAACTCAACAGTCCAGCAATCGAAAATGGTTGCCAAGCAGAAATATCAATGTGGCACCTGTGGCAAAATACTCGCTAAAAAataCTCACTGAAACTACACGAAATGAGCCACGCTGATGTGGAGCGCCAGCATCGTTGCCACTTCGAGGATTGTCAATATGCTGGCCTCACGCCGGAGGCACTCAAAATCCATCTAATCTCACATGCGAATGGAAGTCACAAATGCGAACACGACAACTGCCAATATGTGGGCAAAAGTGAGCTACACTTGAAGAGGCACCTCAAGTCGCATGTGCCCGAAAAGGAGCTGATCGAGGATGGCAAATGGCTGCCGTGCGACCAGTGCGAGTTCAGGGCCCGCATCAGGGGACATCTGAGGCGGCACATGCGTAGCCACACTGGCGAGAAACCCCATCAGTGTCCGCACTGTGACTTCCAGTGCAGCAGCATGGATAATCTGCGCAAGCACATCGTCAAAACGGGCAAGCATCCGGGCAAGTTCATCTACGAGTGTTCGTCCTGCGACACCTTCAAGAGCAACAGTTTCAAGGATCACCGACTACATTTGGCCacgcataaaaataaattgcccTAA
Protein Sequence: MNTESADLEDTHLCIKCNATIVGLSKYIEHRKRSCLSTGGNEHLSKQVVTPATMSAATEQVTHSGMRRSNLDHTYDGFHFAEPEAPSSYLRKTASSHGGKTSKSLTDSYDPTYELGADLFFSSLQLQSVSTGGKTGARPERGAKEEQSWHTSSNCSDPLLKAVREHEVTHFKPLKFVHSPEASEEEDDDEDFEGDDDEHEHEHENENDPDPDPEPDEDYDGRRHSPPTVPATHTGGKWKPEHRPQLQHTHLERISPSWDEPPEEQHDHPPAEHTHGKWVPGSKQLEYRENIDLTKLQQPGASYWCNICCRSLKTRLNYEQHLHSAYHQRRADAERQLEQANLASANLTLSTKDFPQMPPTEQLPRRRRRRAHFLRCDLCRHSMPRHLMGKHLISHYHYRRLQQQQPNQQRRQSALHDILEHMGSIVRQAPFQCLPCRFYANTEQSFQLHWRSSEHVTLTERLGGSFWCSYCQFECASNEEMWQHLLGSTHKEVLFAINRSVPVCIAQRRPLSCSSCSASFLYNAQLRRHLASEHVELVAAGSAADDYQCRFRCGSCGVAQRSRVALQRHEKHQHRLAKYYCTVCRLEFETPLEARRHRSLMQHKRRACRQLSRKCSSSSSSNQPDREIQHMLHEVLEEQPPALSSKRRRLASQCVSCPLSFETPQALVQHRRELHPVDNHACLSCGSSFQSAQALGRHTRSCQLTASTSTAAAAPAAAPALAATATSESKSWNCAQCSFTAQYESDLLYHRFFHTHGSAIGKNELLQCPLCPKQFRKHSLRPHLRNHTDERIFECVECSAKFARRHNLKNHIATVHGRKEKPSPAADNSTVQQSKMVAKQKYQCGTCGKILAKKYSLKLHEMSHADVERQHRCHFEDCQYAGLTPEALKIHLISHANGSHKCEHDNCQYVGKSELHLKRHLKSHVPEKELIEDGKWLPCDQCEFRARIRGHLRRHMRSHTGEKPHQCPHCDFQCSSMDNLRKHIVKTGKHPGKFIYECSSCDTFKSNSFKDHRLHLATHKNKLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00528388;
90% Identity: iTF_00482583;
80% Identity: -