Basic Information

Insect: Drosophila paucipuncta
Gene Symbol: -
Assembly: GCA_035043875.1
Location: JAWNMP010000312.1:27641611-27648959[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0047 0.3 11.6 0.2 1 23 1077 1100 1077 1100 0.96

2 8 0.013 0.85 10.2 1.0 1 23 1105 1128 1105 1128 0.96

3 8 0.00017 0.011 16.1 0.8 1 23 1350 1373 1350 1373 0.96

4 8 0.0027 0.18 12.3 0.8 2 23 1382 1403 1381 1403 0.97

5 8 0.043 2.8 8.5 0.3 1 23 1410 1433 1410 1433 0.96

6 8 1.7e-05 0.0011 19.3 1.4 1 23 1439 1461 1439 1461 0.97

7 8 8.2e-06 0.00053 20.2 0.4 1 23 1466 1488 1466 1488 0.99

8 8 0.0099 0.65 10.5 3.4 1 23 1494 1516 1494 1516 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0047	0.3	11.6	0.2	1	23	1077	1100	1077	1100	0.96
2	8	0.013	0.85	10.2	1.0	1	23	1105	1128	1105	1128	0.96
3	8	0.00017	0.011	16.1	0.8	1	23	1350	1373	1350	1373	0.96
4	8	0.0027	0.18	12.3	0.8	2	23	1382	1403	1381	1403	0.97
5	8	0.043	2.8	8.5	0.3	1	23	1410	1433	1410	1433	0.96
6	8	1.7e-05	0.0011	19.3	1.4	1	23	1439	1461	1439	1461	0.97
7	8	8.2e-06	0.00053	20.2	0.4	1	23	1466	1488	1466	1488	0.99
8	8	0.0099	0.65	10.5	3.4	1	23	1494	1516	1494	1516	0.99

Sequence Information

Coding Sequence: ATGGTTGCGAAGTTTCGGCGGCGATGTGTGCGCGTCCAGCAGCGACTACACGACTACGTCCAGGACATGTTCGAGCACAAGTCACTGAGGGAGGAGGAACGCACACAACAGTCACAGAGCAAGCCACAGGCAAATGAGGCGTCCGCGGCAGATTACATGCATCTGCCACAGTCACAAATGGAGCGGAAGCGTCGCCTGATGCCAAATACGGAATCGTCGTCGCTGCCAAAATATATCAAGACTGATGCCACACACCTGCTGACGCCACCCAAGCTGCGGCGTATGCAGTTGCGAGCGCGCAATATGCGCACTGCCTCCTTGCCAGCCAGTAAAGATGAGACTGAAACGGAAGCGGGAGACATAGAAACGACCAGCGACTGCCGACTGAGTGAGACGAGGCAGCGCACGCCACAGAGATCGCCATACAGAGCGAGACTTATTCACGTGCCATGGAAAACGAAAGCCGCACGCAAACAGATCTCCGAAACGTGGTCCACGTCCTTCTGTCGAACGGACTCTGTGGCGCCGGAACTGCCCAAAGAGCAGGAGTCGGCTAATGGAACGGCTGCTTtagcaaaaacagcagccgAAGCGGGTCCAAATTCATCGGAAGATTTGAGTGATCTGTCGGTGAATGCATGTCGAGGCttcgacaacgacaacggcagcagctCCAATTGCTCCCCAATAGTTAGCCCACAGCCAACTACAAATGTGAAGCTCAGGTTCCCACCAAAACGCTGCTCGCCCAATAAAACTCGTGTTTTGCGGCGACAGGACAGACGCTGCTATGCGCCGGCGAAGAGGACGAGGCGCGTTTTCAAGAAGGCAAAGACGGCAACTGAAGCAGCTAAAGTTGAGCTGTGCTGCGCAGAGGTGCTAAGCAGtaaaacaacaatggcaacggaGGCAGTTGACCAAATGCCAAACAGCTCTGCAAATGAGGAGccgaccagcagcagcagcagcaacagcagaacaCCCGAAAGCCTAGAGATAAGCATAGTCGATGAGCAGGAGAGTAAAATCATTGAGAAAGCAGAGAATGGGATGCCACAAACAGAGTCAAATGCACAGCGGGAAGATCCGCAAATCAGCTCGCCAGTAAGTCAAAGCGAAAATACAGAGGAAGAGCTGGAGCCTGATGAGGCAATCAAATGTTCGCCAGACACTTTGGGCAATGATACTCAGGAAAAGATGTTGATGGAACAACTGGAAAGCATATCAGTAGAAGAAGAAGTGATAAAGGCAGAGGGGGAAGTAAATGGAACAGTAGAGACAACGCTTATGAGTCCTGTGCAGCTTGAGGAATTAAGCTCTTCCAGCATGGATCacatggagagagagagacgtcAATCAGGAACGCCCGAGGTGCCAGCCGCAGAGTGCGAGGTAGAAGTATGCCTAACAAATGAGGAACAAACGTCGGAGCAAATGTCGGATCAACCATTGGATCAAATGTCGGAGGAAACGTCGGAGCTTATAGTCAGTATACCGCTAGATGCGCTTGGCGAGGATCTACAGCGTAAACTATGCAACGAGTCGGAGCTGGCGACAAATGAGTTAGTCGACGAGTTGAAGAAACCAGATGGGGAGCTCAAGGAGCCCGTCGAAGCGGACGATGTCAATAACAATGAGAATGGCGAGAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATGCTGCTGTAGCACTCGCaaccaaacaaattgaagCAGAACCCAACGGAGGCGGCGACggtgatgacgatgatgatgatgatatggAGTCACTGGAGAAACTACCTAATCTGCAGCacgaggaggagcagcagcaacagcatcagcagcagtcaaGCGCTTCTGCCAATGCCAGTTCCATGGATTTTTTGGCTGAATTCGAGAAGCATTGCGAAAAGTCGCTCAAGCTGCAGGCAGCTGGACAGGAGCTGGCGGATGCCAAGCAACAGTTGCCGGTGGAAATGAACGATGTGGAGAATACACTGCACGGCATACTCAATGAGATGCAGGATGATCATCTCTATACGCCCGTCTGCACGCCCATCGATGAGTTCCTCACGCCCGCCGATTATGCGCCGCCAACGCCAGCGTCGCCCAATCTCTTCGAACAGCCAGCGGAGGCACAGCAgccattgcagcagcagcagcaacagcagaaggaGGGAAATCTCTTTGATAGCAGCACATTTGGTAATGAGCTGATTGGCTTTCAAAATGATATGCCCTGCTTTGAGAATATTGAGTCTACGCCGGAATCGATGGCGGTGCAGCAGAGCCTGCAGTTTGAGCTGACACAGCTGTTCAATGAGCTGCAgccagcacaacaacaacagcagcagcaacagcaacagcagtcaacacaacaacagcagcagcaacagttgcagctacAGCAGGAAACTGTCAGCTATGAGGCACTCTATCAAACAGCACCACTTCCTgtcgccaacaacaataataacaataaattgcaGATCATACAAATGACGCCACAAGAGACGCTGTGGCAGGCACAGgctgcacagcagcaacagcaaccacaacagcagccacaggcGACACCAACAACACAACTGCAATGGTCCACTGTGGGCGGCTTGGAGGCGATCAAGACGACGCCCAGTCTGGATAATCtggacagcagcaacagcaacaacaacaacaacaacaataacagcaacacaacCACCTCTACAACAACCACCACCTACTACATTAATGCCAGTGATCTCTAtcaaacacaacagcagcagcagcagcaacagcctaGCGAGTCTTATGCTTTGCTCGACAGCAATGATAACTATGTGctggaacagcagcaacagcagcagcaacaacaacaacaaccacaacaacagcagcctaTTATGATTCTCATACAGCAGCcggagctgcagcagccagtgGCTTCAGCCAGCAATCCGCAGCAGGCGCCGCTCCACATTAACTACAGCAATGAGCTGCAAGcttatcaacagcagcagcagcagcagcaacatccacatcaaccacaaccacatccacatccaaaaCCACAAGCACATCCACgtccacagcaacaacaagtacaaAATACAGTATTAGGCTTACCAGCAGTGGTGCCGCCGCCCACTCGTGGTCGCCCGCCTATGTTAAAGTGCCGCTTCTGTCAGAATGGACCGCGCTTCTCGAGCAGTCTGGAGTACAGTCGCCACATCATTGAGCTGCATCCGGCCGTCGCGCCATTCAACTGCCCCTACTGTCCGCTCGCCTTTGCTGGTCGCAGCAAGCGCAACCAGCACATCCTCAGTAGCCACATTGTGCAGCAGTTTCACTGTGGTCAGTGCTCGCAAATGTTTCCCTCGCAGCGTGCGctcgatttgcatttgcagcgaTTACACATGCCACTCGCCACGGAGCCGACatcagcatcggcatcggcatcgagTGGCACAGCATCAGCTGGTGTGCGTCTAGAAGAGGTTCAACTGCGGATTGCCACCACCAATgatctgcaacagcaacagcagcagcagcagccacaacacaAGCGTCAACCACTTCAGCAGCAGTCAGTTGCACATATGCGTGCCTTGGAATTACAGACAAGCCCATCCAGACCACGCAGGACGCGCATACTGTGCTGCCCGGACTGCGAGGACTGCACTTCGGCCAGTGGCCACACTCAATGCAGCGTGCAGCCATACGAGGAGCTGAACACTTTGCAACCACCGCCCACGGTGCTGACGCCGCCGTCGACAATTGCATCGCTGCCGTCGCCGCAGCCGGCGCCGCATATAACGTTGCCGTCACCGGAGCAATCGGAGCCAGACTCGACGACGGCAACGTTGCGGCAGTTCCGCAAACGTTGCACAGTCAACAGCTCGACAACAACggcggcagcagtagcagctgctacagcagcagcagcagcaggagtagcaacaacaacaacaacaatgctaaCAACCACTGCCGCCTCACCATCGCCGtcgtcatcgccatcgtcgtcgACCATGGAGACAACAAGCGCAGCACTGCAACTGGGCAAACTGCGTGGCACCCATCAGTGCGTCATCTGCGAGAAGCGTTTCACCAACGTTATTGCGCTGCGGAAGCATCAGCAACTGGCCCACGATTCGCAGACGACGATGCCGTGGGTCTGTTCGATCTGCAAGCGAGGATATCGGAAGCGCACCGATATGGATAACCATATGAAATCGCACGAGCCGAAGGGTCGGCCCTATGAGTGCAACGAGTGCTGGGTGCGATTTCCGGAATTCAAGCAGCTGGCGATGCACAAGTTCACCGTCCACGAACTAATCAAGCCGCACACCTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCACGGTGTGCGAGGCTTCGAGTGCGAAGAATGCGATGAGGCATTCGCCTACATCAAAGATTTGCGCAAACACCGTCGAACCCACAACAGCGAACTATTTTACAAATGCGATTACTGTCCGCGCACGTTTCTACATTTTACGCCCTATCGCGTACATATGAACACCCACCTGCCGCTGGGTGTGTTCCTTAACGACAAGATGCCCAGTAGCGTGTGCAGCAAAACGGAGAATCCATCAAACACTGAAGAATCGCTGCTGCCATTGACGCCGCTGAGCAACTGCAATGGaaacagtggcagcaacagcggaTTAGAGGACTGTCCCGGCTCTGTGGAGATGGTGGTGGAGAGCAGCATGGCGGCGCCATCTTTGGACATGATTGTCGATACGCCATAA
Protein Sequence: MVAKFRRRCVRVQQRLHDYVQDMFEHKSLREEERTQQSQSKPQANEASAADYMHLPQSQMERKRRLMPNTESSSLPKYIKTDATHLLTPPKLRRMQLRARNMRTASLPASKDETETEAGDIETTSDCRLSETRQRTPQRSPYRARLIHVPWKTKAARKQISETWSTSFCRTDSVAPELPKEQESANGTAALAKTAAEAGPNSSEDLSDLSVNACRGFDNDNGSSSNCSPIVSPQPTTNVKLRFPPKRCSPNKTRVLRRQDRRCYAPAKRTRRVFKKAKTATEAAKVELCCAEVLSSKTTMATEAVDQMPNSSANEEPTSSSSSNSRTPESLEISIVDEQESKIIEKAENGMPQTESNAQREDPQISSPVSQSENTEEELEPDEAIKCSPDTLGNDTQEKMLMEQLESISVEEEVIKAEGEVNGTVETTLMSPVQLEELSSSSMDHMERERRQSGTPEVPAAECEVEVCLTNEEQTSEQMSDQPLDQMSEETSELIVSIPLDALGEDLQRKLCNESELATNELVDELKKPDGELKEPVEADDVNNNENGENFCQSATADSFNAAVALATKQIEAEPNGGGDGDDDDDDDMESLEKLPNLQHEEEQQQQHQQQSSASANASSMDFLAEFEKHCEKSLKLQAAGQELADAKQQLPVEMNDVENTLHGILNEMQDDHLYTPVCTPIDEFLTPADYAPPTPASPNLFEQPAEAQQPLQQQQQQQKEGNLFDSSTFGNELIGFQNDMPCFENIESTPESMAVQQSLQFELTQLFNELQPAQQQQQQQQQQQSTQQQQQQQLQLQQETVSYEALYQTAPLPVANNNNNNKLQIIQMTPQETLWQAQAAQQQQQPQQQPQATPTTQLQWSTVGGLEAIKTTPSLDNLDSSNSNNNNNNNNSNTTTSTTTTTYYINASDLYQTQQQQQQQQPSESYALLDSNDNYVLEQQQQQQQQQQQPQQQQPIMILIQQPELQQPVASASNPQQAPLHINYSNELQAYQQQQQQQQHPHQPQPHPHPKPQAHPRPQQQQVQNTVLGLPAVVPPPTRGRPPMLKCRFCQNGPRFSSSLEYSRHIIELHPAVAPFNCPYCPLAFAGRSKRNQHILSSHIVQQFHCGQCSQMFPSQRALDLHLQRLHMPLATEPTSASASASSGTASAGVRLEEVQLRIATTNDLQQQQQQQQPQHKRQPLQQQSVAHMRALELQTSPSRPRRTRILCCPDCEDCTSASGHTQCSVQPYEELNTLQPPPTVLTPPSTIASLPSPQPAPHITLPSPEQSEPDSTTATLRQFRKRCTVNSSTTTAAAVAAATAAAAAGVATTTTTMLTTTAASPSPSSSPSSSTMETTSAALQLGKLRGTHQCVICEKRFTNVIALRKHQQLAHDSQTTMPWVCSICKRGYRKRTDMDNHMKSHEPKGRPYECNECWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGVRGFECEECDEAFAYIKDLRKHRRTHNSELFYKCDYCPRTFLHFTPYRVHMNTHLPLGVFLNDKMPSSVCSKTENPSNTEESLLPLTPLSNCNGNSGSNSGLEDCPGSVEMVVESSMAAPSLDMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00576613;
90% Identity: iTF_00518707;
80% Identity: -