Basic Information

Insect: Drosophila paucipuncta
Gene Symbol: salm
Assembly: GCA_035043875.1
Location: JAWNMP010000194.1:1062911-1074288[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.2e-06 0.00034 20.9 0.9 1 23 513 535 513 535 0.98

2 7 1e-05 0.00067 19.9 2.1 1 23 541 563 541 563 0.98

3 7 0.017 1.1 9.8 1.5 2 23 980 1001 979 1001 0.98

4 7 7.4e-08 4.8e-06 26.7 0.5 1 23 1007 1029 1007 1029 0.98

5 7 0.00023 0.015 15.7 2.3 1 23 1039 1061 1039 1061 0.98

6 7 0.03 2 9.0 2.9 2 23 1481 1502 1480 1502 0.97

7 7 2.9e-08 1.9e-06 28.0 1.3 1 23 1508 1530 1508 1530 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.2e-06	0.00034	20.9	0.9	1	23	513	535	513	535	0.98
2	7	1e-05	0.00067	19.9	2.1	1	23	541	563	541	563	0.98
3	7	0.017	1.1	9.8	1.5	2	23	980	1001	979	1001	0.98
4	7	7.4e-08	4.8e-06	26.7	0.5	1	23	1007	1029	1007	1029	0.98
5	7	0.00023	0.015	15.7	2.3	1	23	1039	1061	1039	1061	0.98
6	7	0.03	2	9.0	2.9	2	23	1481	1502	1480	1502	0.97
7	7	2.9e-08	1.9e-06	28.0	1.3	1	23	1508	1530	1508	1530	0.99

Sequence Information

Coding Sequence: ATGAAAAATCACTTGCAAAACGTTCTGTGTGCAATGCGTAGTGACTTCAAGGATAATCACCAGGAgaccataaataaaatgatacaATTTGGTACCGTTAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCCAGAAGCGCCGAGAAAGACATCGCAAGTGATCAGGAAGATAATGGCGCCTGCTCGCCGCTGACAACGGCGACACCGGCCAGCGCCAGTGCCGGGAATAGTCCCTGCCCCAGCCGCAGTCCGCGGCGccacagcgacgacgacgacgaggtgGCTGGCGAAAGGGAGCTTCCACAAGTGGCAGATAGCAAAGAGGATAAACAGGATAAGCTGGATAAGCTTAAGGAGAGTGTGGAGCAAATTGAGAATCAAACGGACGCGATCATCGAGGATCACAATCACAATAatagcagcaaccacaacaacaacaacgatagcgataacgataacgttgacgataacgataacaacaaaGTCAAGGTCATGACAAAGCCGCCCGAGGAACACGAGACGAACGCGAACGCGAACTCAAACTCATCGTTGCCCAATTCACCCACCGCTGCCACATCCAGCATGGAGGAGCCACAAAAGCAACTGGATGTGGATGTTGAGATGCCGCAGGCGGAGCACGAGAAGAGCCCGGCGACGCCGCCGGTCAGCAAtgcaacaggagcaacagcaacggcaacagcagcagcagcagcagcagcccaacAGTTTGGGGCAACACCCGTCACCCTGGAGGCGATACAAAACATGCAGATGGCAATCGCACAGTTTGCGGCCAAGACAATTGCGAATGGCGCCTCGGGTGCGGATAATGAGGCGGCCATGAAGCAGCTGGCCTTCCTCCAGCAGACGCTCTTcaatctgcagcagcagcaactctttCAGATTCAGCTCATTCAGCAGCTGCAATCGCAGCTGGCCCTCAATCAGGTCAAGCAgagcaacgacgacgacgccgacgaGGATGTGGAGCCCGAGGAGCGAGAGGATGGCGAAACGGATACctatgaggaggaggagcgcaTTGCCGACATGGAGTTGCGACTGAAGGCCGAGGCTCGCATGGCCGAGTCCAAGGCACGCCAGCATCTCATCAATGCGGGAGTTCCGCTGCGTGaacgttcccgttcccgttccgcCTCCCCCTCACCCAGCCCCTCGGCGGCACCGTCGCCGGCTGTCTCCCTGAAGCGCAAGCGGGGCGATGATGCCGGCGCCAAGTCTGGTGCTGGTGCTAAGGCATTTGGCCAGCCGCAGGAGAGCGCCCAGGATGCGCTGTCCAAGCTCAAGGAGATGGAGAATATGCCGTTGCCCTTTGGCACCGATTTGGCGTCCAGCATCATAACGAATCACGATGATCTGCCCGAACCGAACTCGTTGGATCTGTTACAGAAACGGGCACAGGAAGTGCTCGACTCGGCCTCGCAAGGCATCCTGGCCAACAACATGGCCGATGACTTTGCGTTCGGGGACAAGTGCGGCGAGGGCAAGGGTCGCAACGAGCCATTCTTCAAGCATCGCTGCCGGTACTGCGGCAAGGTCTTTGGCTCCGATTCGGCGCTACAGATCCACATACGATCTCATACGGGCGAGCGCCCCTTCAAGTGCAACGTCTGCGGCAGTCGGTTCACCACCAAGGGCAACCTCAAGGTGCACTTCCAGCGGCATGCCCAGAAGTTTCCGCACGTGCCGATGAATGCGACACCGATACCCGAGCACATGGACAAGTTCCATCCGCCGCTGTTGGATCAAATGTCTCCGGACAGTTCACCCACACAATCGCCAGCGCCGGCATCCGGTCAGGCGTCGGCCAGCTCAACGTCCGCTCATCCGCCAGCGATGTCTTTCCCCGGCCTGCAGGGCCTCTATCGTCCGCCCATGGAGCTGCTGAAGTCCCTGGGAGCGGCAGCTGGCAGTACGGCCGGACTGCCGCATCCCTTCTTCCCACAGATGCCAGGACTGGGTGCGGCTCTCAAacacagccaacaacagcagcagcagcatcagcagcagcaacagcagcaggttAGTCAGGAAATGCCCACAGATTTGCGCAAATCGTCTGGTCCCAGTTCACCGCACGACGAGgaagacgatgatgatgatgacatgACTGCGGTGCGGTTGCCCGTCAAAGCGGAACTGCTCGAGGAGGAGAAGACGGAGCCGGAGACGGCAGCAACGTCCGCCGAGTGTGCCGACATGgaaccagagccagagccactGCCACTGGAGGTGCGCATCAAGGAGGAACGCGTCGATGAGCttgaggagcaggaggaggagcagcagcgagcgagcgagcagcagcagcggcgggagcagcagcagcaacaggaaacACCTTCCAATCGCTCACCGGCAACCTCGCCGACGGACCCGGTGTCTGAGACGCCGCCACTGATGCAGCGACATCATcaccagcatcatcatcagcatcagcatcatcagcagcatcatcagcagcatcatcatcatcatcatcatccctcccagcagcaccaccataTGCCCGGCTATCCACCGGTGGTGCAACCGATTCAACCACCAGCAATAATGCACGCCCAGTGCTCGCCCGGCTCCCATTCGCATCTGGATCAGCTGCCGACACCGGGCCAATTGCCGCCAACGATGCCACATCGTGAGGATTTCTTTGCCGAACGATTCCCCCTCAATTTCACCACAAAGACACTCTCCCCCGAGCACCACTCGCCCATTCGCTCGCCAGCTGGCCATGCTCATGCCCACATTCCGCGTTCGCCGTTCTTCAATCCGATCAAGCATGAGATGGCGGCGCtgttgccacgcccacatagCAACGACAACTCGTGGGAGAACTTCATTGAGGTGTCGAACACGTCGGAGACGATGAAGCTCAAGGAGCTGATGAAGAACAAGAAGATCAGTGATCCCAACCAGTGTGTCGTCTGCGATCGCGTCCTCTCCTGCAAGAGTGCCCTGCAGATGCACTATCGCACCCATACCGGCGAGAGACCCTTCAAGTGTCGGATCTGTGGACGCGCCTTCACCACCAAGGGTAATCTGAAGACGCACATGGCTGTGCACAAGATTCGTCCGCCGATGCGCAATTTCCATCAGTGTCCCGTCTGCCACAAGAAGTACTCCAATGCGCTGGTCCTCCAGCAGCACATCCGGCTGCACACGGGCGAGCCAACGGATCTGACGCCCGAGCAAATTCAGGCGGCCGAGATTCGTGATCCGCCGCCCTCAATGATGCCCGGACACTTTATGAATCCCTTTGCAGCGGCTGCTTTTCACTTTGGTGCCATGCCTGGTGGTGGTCCGGGCGGTCATAATCCGGGTGCGGGTGCGGCTGGCATGTCGGGTGCTCCACACAATGGCGCCTTGGGTTCGGAGTCGTCGCAGGGTGATCTTGAAGACAACATGGACTgtggcgatggcgatgattTCGACGATGCCTCCTCGGACCATCTCTCCAACGATCCAGCGATGGGCGATGAACGTTCGCGTTCCGGCGATGACTTCAAGTCGCTGCTCTTCGAGCAGAAGCTGCGCATCGATGCCACCGGTGTGGTCAACATCAATAGTCATCATCCACACTCACATCATCAGCATTCGCGTCCTCGATCCGCTGCCAGCAATGCCAATTCGATTGGATCCGCTTCCGCTTCACCCTCCGCACCCGCCAGTCCCAGTTCGCAGCCGAAGCCGAGCTGTTCGCCGGTTCGATCCGTCTCGGAGGCATCGCAGGGCGCACTCGACTTGACGCCACGTGCCGTTGCTCCTGTCCCGTCGCAGCCACTTGCCTCCACGTCGCGCTCCCCGCCCCCGCCCAAGGAGAAGACAGTGAGTCCCCTGAGCCAGCAGTCCACACCTGCACGCAGTCCCAATGCCTCCGTCTCCGCCTCTGCGTCTGCCTCCGTCTCTGCCTCGCAGCTGCTCTCTTCGCAGCTGGCACCGTCTGTGGGCATTGATTGCCTGCCGCCCGGCTTGCAGcatcatctgcagcagcagcaccagcatctgatgcagcaacaggcggcggttgcagcagcagcggctgcccAACATCATCACCATCAGATGCAGCAACATGCCGCCGCCCTGCATCAGCATCAGGAGCAACTGCGTCGCGAGGCACAGGAAGTGCAGCAAaaagcggcagctgctgcggcagcggcagcggctgctgcccAGCGTCAGACATCGCCACAGCCTCCGACACGTGCCGGGGAATCACCTGGCGGTCCACCCGGTGGTGGTCAGCCCAATCCGTTGATCGGTGCCCGACCGCCATTCGGCATGTTCCCCAATCTGCCCATCTTCCCGCCGGCCACCACCCAGAATATGTGCAATGCCATGAATCAGATAGCCCAATCCGTGATGCCCGCGGCACCGTTCAATCCGCTGGCATTGAGTGGGGTGCGGGGCAGCACCACCTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATTCACTACAGGAGCCACACCAAGGAGCGGCCCTTCAAGTGCAACATCTGCGATCGCGGCTTCACAACTAAGgGCAACCTCAAGCAGCACATGCTGACACACAAGATCCGCGACATGGAGCAGGAGACCTTCAGGAATCGAGCTGTAAAGTATATGAACGAGTGGAGCGATGAACGCGAATAA
Protein Sequence: MKNHLQNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDIASDQEDNGACSPLTTATPASASAGNSPCPSRSPRRHSDDDDEVAGERELPQVADSKEDKQDKLDKLKESVEQIENQTDAIIEDHNHNNSSNHNNNNDSDNDNVDDNDNNKVKVMTKPPEEHETNANANSNSSLPNSPTAATSSMEEPQKQLDVDVEMPQAEHEKSPATPPVSNATGATATATAAAAAAAQQFGATPVTLEAIQNMQMAIAQFAAKTIANGASGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKQSNDDDADEDVEPEEREDGETDTYEEEERIADMELRLKAEARMAESKARQHLINAGVPLRERSRSRSASPSPSPSAAPSPAVSLKRKRGDDAGAKSGAGAKAFGQPQESAQDALSKLKEMENMPLPFGTDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKCGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTQSPAPASGQASASSTSAHPPAMSFPGLQGLYRPPMELLKSLGAAAGSTAGLPHPFFPQMPGLGAALKHSQQQQQQHQQQQQQQVSQEMPTDLRKSSGPSSPHDEEDDDDDDMTAVRLPVKAELLEEEKTEPETAATSAECADMEPEPEPLPLEVRIKEERVDELEEQEEEQQRASEQQQRREQQQQQETPSNRSPATSPTDPVSETPPLMQRHHHQHHHQHQHHQQHHQQHHHHHHHPSQQHHHMPGYPPVVQPIQPPAIMHAQCSPGSHSHLDQLPTPGQLPPTMPHREDFFAERFPLNFTTKTLSPEHHSPIRSPAGHAHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGGHNPGAGAAGMSGAPHNGALGSESSQGDLEDNMDCGDGDDFDDASSDHLSNDPAMGDERSRSGDDFKSLLFEQKLRIDATGVVNINSHHPHSHHQHSRPRSAASNANSIGSASASPSAPASPSSQPKPSCSPVRSVSEASQGALDLTPRAVAPVPSQPLASTSRSPPPPKEKTVSPLSQQSTPARSPNASVSASASASVSASQLLSSQLAPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQQKAAAAAAAAAAAAQRQTSPQPPTRAGESPGGPPGGGQPNPLIGARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDERE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499142;
90% Identity: iTF_00542688;
80% Identity: -