Basic Information

Insect: Drosophila parvula
Gene Symbol: stc
Assembly: GCA_018904695.1
Location: JAEIIG010017647.1:1-1862[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.025 2.3e+02 1.9 2.2 4 11 23 30 22 31 0.91

2 16 7.3e-07 0.0066 16.5 15.3 3 19 36 52 35 52 0.92

3 16 5.5e-06 0.05 13.6 8.2 1 18 88 105 88 106 0.95

4 16 2 1.8e+04 -5.4 3.9 7 13 110 116 110 117 0.75

5 16 2 1.8e+04 -4.1 1.1 6 10 136 140 135 140 0.82

6 16 1.8e-09 1.6e-05 24.8 13.6 1 19 146 164 146 164 0.98

7 16 1.1 1e+04 -3.3 0.5 5 10 194 199 194 199 0.83

8 16 1.2e-05 0.11 12.5 17.0 4 19 212 227 205 227 0.88

9 16 2 1.8e+04 -4.1 1.3 5 10 256 261 256 261 0.88

10 16 0.04 3.6e+02 1.3 12.0 1 11 267 277 267 289 0.79

11 16 2.5e-10 2.3e-06 27.5 15.5 1 18 294 311 294 312 0.97

12 16 0.71 6.5e+03 -2.7 0.6 6 10 341 345 341 347 0.82

13 16 2 1.8e+04 -9.3 12.7 10 18 359 368 348 369 0.71

14 16 0.63 5.8e+03 -2.5 0.9 9 13 375 379 373 380 0.78

15 16 6.6e-09 6e-05 23.0 11.0 1 17 405 421 405 427 0.89

16 16 7.6e-07 0.0069 16.4 12.5 1 19 437 456 437 456 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.025	2.3e+02	1.9	2.2	4	11	23	30	22	31	0.91
2	16	7.3e-07	0.0066	16.5	15.3	3	19	36	52	35	52	0.92
3	16	5.5e-06	0.05	13.6	8.2	1	18	88	105	88	106	0.95
4	16	2	1.8e+04	-5.4	3.9	7	13	110	116	110	117	0.75
5	16	2	1.8e+04	-4.1	1.1	6	10	136	140	135	140	0.82
6	16	1.8e-09	1.6e-05	24.8	13.6	1	19	146	164	146	164	0.98
7	16	1.1	1e+04	-3.3	0.5	5	10	194	199	194	199	0.83
8	16	1.2e-05	0.11	12.5	17.0	4	19	212	227	205	227	0.88
9	16	2	1.8e+04	-4.1	1.3	5	10	256	261	256	261	0.88
10	16	0.04	3.6e+02	1.3	12.0	1	11	267	277	267	289	0.79
11	16	2.5e-10	2.3e-06	27.5	15.5	1	18	294	311	294	312	0.97
12	16	0.71	6.5e+03	-2.7	0.6	6	10	341	345	341	347	0.82
13	16	2	1.8e+04	-9.3	12.7	10	18	359	368	348	369	0.71
14	16	0.63	5.8e+03	-2.5	0.9	9	13	375	379	373	380	0.78
15	16	6.6e-09	6e-05	23.0	11.0	1	17	405	421	405	427	0.89
16	16	7.6e-07	0.0069	16.4	12.5	1	19	437	456	437	456	0.96

Sequence Information

Coding Sequence: CCGCGCGAGTACCTCTGCTTTTGCGGAAAATTCAAGAACCCGCCGGTGTCCCGCACGGAACTGGCGCACAGCTGCGGCGAGGTTTGCTGTCGGATTGAAGGATGCACTCATGCTTGCACACTACTCTGTCACCCAGGCCCCTGTCCGCCCTGCCAGGCCAACGTGGTGCGCAGCTGTGGTTGCGGCCGCAGCTCAAAGTCCATGCAGTGCGCCATGAAGGAGGACCTGCTATGCGGCGAGATTTGTGACAAGGCGCTCAACTGTGCCGAGCATCGGTGCCGCGCCGAGTGCCATGCGGGCAAGTGTGCAGCTTGTGCGGAGCAGGTGGAGCAGCACTGTCACTGCGGCAAGCAAGACCGTCAGGTGCTGTGCACGCGCGAAAACCAGGACAAGCGTAGCTACTCGTGCAAGGAGAGCTGCGGGAAGCCGCTGCCATGCGGTAACCACAAGTGCAAGGACTCGTGTCACGCAGGCAGCTGCAGGCCCTGCAAGCTGAGTCCCGAACAGATAACCAGCTGTCCGTGCGGTAAGATGCCCGTGCCGGCTGGCCAACGTTCGAGCTGCCTGGACCCGATACCAACGTGCGAGGGAATCTGCTCGAGGACGCTGCGCTGCGGAAAGCCAGCTCATCCGCATCAGTGCGCCAGCAAGTGTCACCTGGGCCAGTGTCCGCCGTGTCCGAAGCAAACGGCTGTGAAGTGTCGTTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGTTGTCCACCCGGGCGGACGATGCCCGCTGCAAGCGGCGCTGCACGAAGAAGCGCAGCTGCGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGATATTGATCACGCCTGCCCGTTGCCCTGCAACCGGACGCTGAGCTGCGGCAAGCACAAGTGTGATCAGCCCTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGGACCGAAGTGATATATCCGCCGGTGCCGTGCGGCACCAAGAAGCCGCTCTGTAAACGGCCCTGCTCGCGATCCCATCCCTGCGAGCATCCGCCGCAGCACAACTGCCATTCGGCGGCCACATGTCCGCCCTGCATGATATTCACCACCAAGTACTGCCACGGTGGTCACGAGCAGCGCAAGACTATACCCTGCTCGCAGGCCAACTTTAGCTGCGGCTTGGCGTGCGGCAAACCTTTGCCTTGCGGTCGCCATAAATGCATTAAGCCGTGTCACGAGGGCGCCTGTCAAACCGCTGGCGAGGTATGCCGTCAGAGCTGCACCAAGCCGCGAGCGATCTGTGGCCATAAATGTGCCGCTGCCTGTCACGAGGGCATCTGTCCCGAAACGCCGTGCAAGGAGCTGGTCGAGGTTCAGTGTGAATGCGGTCACCGGAAGCAGAGTCGCAGCTGTCAGGAGCTGGCAAGGGAGCACAGTCGCATAGCCACCGCCCAGTTGGCCTCCTCCATGGCGGAGATGTCGCGCGGAAACTACATGGAGTTGAGCGAGATTCTGGCCCCGGCCAAGACCAACAAATCGAACCGAACTTTGGACTGCAACGACGAGTGCCGTCTGCTGGAGCGTAATCGTCGACTGGCTTCTGCCCTGTCCTCGGGTAATCCAGACACCAAGCAAAAGTCGTTGACCAAGTACTCGGAGTTTGTGCGCAGCTTTGCGAAGAGGAATCAGGCTCTGACCAAGAGCGTGTACGAAACCCTAAGCGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGGAGCCACTCCTTTCCCACGATGAA
Protein Sequence: PREYLCFCGKFKNPPVSRTELAHSCGEVCCRIEGCTHACTLLCHPGPCPPCQANVVRSCGCGRSSKSMQCAMKEDLLCGEICDKALNCAEHRCRAECHAGKCAACAEQVEQHCHCGKQDRQVLCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAGQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGTEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMIFTTKYCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQTAGEVCRQSCTKPRAICGHKCAAACHEGICPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTNKSNRTLDCNDECRLLERNRRLASALSSGNPDTKQKSLTKYSEFVRSFAKRNQALTKSVYETLSDLVKLAKESKQRSRSHSFPTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00608117;
90% Identity: -
80% Identity: -