Basic Information

Insect: Drosophila parvula
Gene Symbol: -
Assembly: GCA_018904695.1
Location: JAEIIG010035334.1:19945-23845[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.2e-05 0.0062 16.9 0.4 1 23 173 196 173 196 0.96

2 14 0.0016 0.12 12.9 3.1 2 23 245 267 241 267 0.90

3 14 0.007 0.53 10.9 0.8 1 23 357 380 357 380 0.93

4 14 0.018 1.4 9.6 5.8 2 23 429 451 428 452 0.95

5 14 0.00063 0.048 14.2 0.4 1 23 518 541 518 541 0.92

6 14 1.9 1.4e+02 3.3 0.1 2 14 560 572 559 584 0.85

7 14 0.00064 0.048 14.1 3.3 2 23 592 614 592 614 0.96

8 14 0.044 3.3 8.4 0.5 1 23 705 728 705 728 0.95

9 14 4.7e-05 0.0036 17.7 0.3 1 23 762 785 762 785 0.93

10 14 0.004 0.3 11.6 1.5 2 23 835 857 834 857 0.95

11 14 0.029 2.2 8.9 3.5 1 23 952 974 952 975 0.93

12 14 0.002 0.15 12.6 1.4 1 21 1027 1047 1027 1048 0.95

13 14 3.3 2.5e+02 2.5 0.1 3 23 1080 1103 1078 1103 0.74

14 14 2.8 2.1e+02 2.7 0.3 1 12 1123 1134 1123 1147 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.2e-05	0.0062	16.9	0.4	1	23	173	196	173	196	0.96
2	14	0.0016	0.12	12.9	3.1	2	23	245	267	241	267	0.90
3	14	0.007	0.53	10.9	0.8	1	23	357	380	357	380	0.93
4	14	0.018	1.4	9.6	5.8	2	23	429	451	428	452	0.95
5	14	0.00063	0.048	14.2	0.4	1	23	518	541	518	541	0.92
6	14	1.9	1.4e+02	3.3	0.1	2	14	560	572	559	584	0.85
7	14	0.00064	0.048	14.1	3.3	2	23	592	614	592	614	0.96
8	14	0.044	3.3	8.4	0.5	1	23	705	728	705	728	0.95
9	14	4.7e-05	0.0036	17.7	0.3	1	23	762	785	762	785	0.93
10	14	0.004	0.3	11.6	1.5	2	23	835	857	834	857	0.95
11	14	0.029	2.2	8.9	3.5	1	23	952	974	952	975	0.93
12	14	0.002	0.15	12.6	1.4	1	21	1027	1047	1027	1048	0.95
13	14	3.3	2.5e+02	2.5	0.1	3	23	1080	1103	1078	1103	0.74
14	14	2.8	2.1e+02	2.7	0.3	1	12	1123	1134	1123	1147	0.72

Sequence Information

Coding Sequence: ATGGAAGGCATGGATCTGTGGACCTCGATGTTCTCCTCTGAGTTCGAAGATGGAGAGCCGGAAGGTGGTGGCGAGGCAGAGCTGCTGGAGGGTGGTGAGAATGGCACGCAGTTCGGCAATGGAAATGGTGACTTTCTCGACGACACGGCGATTCTGGAGGCTGGAGATGCAGTCGACGACCTGCTGGACGGCGAAGACGGTGAGCGGGAGGAGGAGGACGAATTGGATGAGTCTGAGAAGGGGTCTAAGGGACCTGAACCCGACGACGATGCTCTCTTTGACTTCGAACTGGAGCCCATTGTGAGTATTGGGGAGACGCAACCGACGACGGCCGGAGCGGTTCTGGCTCCCGCCGGACCTATGGGCGCCAGCCATGTGCGTCCCGCCCTGCAGCGGCACTCACTGCCTGCACTGAGTCGCCCGCGATCCATTGGGTTCCCCGTTCGGCCAACGACCTCACAGATCAACGCCACCGATGAGAACGGCGTGCCCATCAACTATGAGCTGGGCGTGGTGTATATCTGCCCAGCCTGCGGCGGAGAGTTCCGGCAGCAGGATCACTGGAAGCGGCACATGAATCAAATCCACAGGTACAACACTCTACGCGGCCTCAACTTTGCACCGCTGGACAAGCTGTACCAGCGCTGCAAGGAGTGCCACAAGCGCATCGCCATGCATAGTCGGGAGAACCTGCTGAAGCACAAGTTCACGCACCTGCCTTTCAGGTGCACCAAGTGCTACATCTGCAAGAGGGAGTACAAATACAGACAAGATCTAATGGTGCATCTGCGCATGGTCCACTGTGACGAAGTGGTGGCCATGATGCGGGAGGGTTACAATGCAGCCGGACGCAAGACCCGCGTTAGGGAATCGCGCACCGAGCAGCTGCAGCGGGAGAAGAGCTTTCTCGAGGATGAGGATCGCATCGAAGTGCGGAACGAGCTGCTCGAACCGGATTTGGATGAGTCTGGCGGAGGCATGGAGCAGCAGTCGTTGGAGGAGCCGCTCTGTAAGAAGCGTTCTGGAGGTGGAGGAGAAGCCGCCGAGCTATGCGAGGATTACATTCACTACATGTGCCCCGACTGCGGCACTGAGTGCGACACCCATGCCCAGTGGAGCCAGCACATAGAGTTTGTCCATGATTACGTGAGTCGGCGGGGACTCAACTTCCGGAGCGTCGACATGCAGATGCAGTGCCTGGAATGCAAGAAGATTGTCACACCCAACACCATCAAGTCGCTGCGCTCCCACAAATTCAGTCACTTGTCGCATCCCGAGTGGCTGCGCTGCAAGCTCTGCTACAAGGGCTACACGGATCATCATGAACTGGTGCGGCACCTGCTGAAGCAGCATCATCTCGAGACGCTGATGTCGGAGAATGACCCCGAGAATGAGGATGGTGAGGTGACCCTTCCGGCTGATGACTGCCAAGATAATGAAAACGGCGAGCGAAACGGCGCCGCCTTAGACGAGGATTCTCCCTACTTTGAGGACGCCCCCCGGCGTGGCGGTCGCATCAGCAGCGATGACATTTTCGAGCCGCACATCGACTACCTCTGTCCGCAGTGCGGCAAGGAGTTCATTGAGAAGAAGCACTGGCGCACCCATGTGGTGATGGCTCACAGCATGAACGATCTGTCCAAGCTGAACTTTGAGATGATAAACGAACGGCAGCTGAAGTGCACCGAATGCGACAAGATCATTACGAATGCGTATGGCATACAGAATGCGCAGCAGCACAGGATCACCCACTTGCCGTTCAAGGCGTATGCCAGATGCCGCAAGTGCCACAAGTCCTACACGGATCGCAAGGGTCTGGTCAAGCATCTGGCCACCTATCATCGCATAGGCTGTGAGCCTCGGAAGTCGGGAGGAGCACAAACTACGGCCAAGCAGCCCCGCAAGCAGATCGTGACGGTGGCCAATGAGACCTACGAGATTATCTACCTGGACGATGTGGAGCAGAGCAGCCTGGAGGAGGAGGAAAATGACTTTGGTGAACAAATGCTCGCGGATGAGGAGGATTACCCGCTTCCTCCGCTACCGCAACAACAACCCCGGCAGTTGCCACCGCCCCCACGACCCTCCTCCGTGCAGAACAACCAGCAGCGCTACAAGTGCGTTCACTGCAGCACCCTCTTTCCCACCCAGGTGGCCGTACGGCTGCACATCAGCGAGAACCACTGCCGGAAACCCAATCAGAAGGGCCGCAGGCATCGCCATGCGCTCTCCCATCCCGGTGGCTCCGACTCCGGCCTGAATACCGTGGAGCAGAACTACATCTTCCTGTGCCCGTCGTGCGGCAAGGAGTACAAGACGCAGTACGAATGGCGGCGTCACATCAACGAGGAGCACAACTTCGACAAGCGAAACTATCTGAACATGCGGCAGCTGGACAAGTATCGCTACCAGTGCACCCAGTGCAAGGACATTGTGTGCAACTCGAAGCTGAAGGGCCTGCAGGACCATCACTTCCGTCACCTGCCATACCGCCTGTATCTGAAGTGCCTGGTCTGCGGCACCTGCTACAATCACAAGCCCAACATAGCTGCCCATCTCAGGGCGCGGCACAACATCTACGATAGGGAGTCGCCCCTGATAGTCACCAAGCCCAAAAATGTGTACGGTCGGGGTAAGGATAAAGATATGGAGAAGGCACCCTTAACCGCTCCCGCGCCGCCAGCAGGATCTCCACCCGGTTGCTCCTCCTCCTCGGCGGCTGCTGCTCCTCCTTCCGTGGTAAGTCGCACTCTCAAACCCCAACCCGGTGACCTGCCCACGCGACCCGCTGGCCTGAACACCCTGGAGGACAGCATATCGTACCACAATGCCGTCGACATGGACTTCATCACGTACTTCTGCCCCAAGTGCAACCAGAACTTCGACTCGCACGCCTTCTGGCGCAAGCACATCGTCGAACACCACAACTTTAACAGTCGCGAGGGTTTGAACTTCCGGCAGATCGATAACCATCACTACCTGTGCCTCGAGTGCTACAAGCGGGTGACCGTGACCCACACCAAGGGCGCCATTGGTCAGCTGCAGTCGCACAAGTTCCGCCATCTCCCCCATCGCTCCTTCAAGTGTCTCACCTGCGACGCCTCTTTTGTGCGCAAACAAATGTTCTTCAAGCACCTGAATCGCGACACAAACCGGTGTGACAATCGTCCCCAAAGGGAGCTGGATGAGGAGGAGCCCATTGAAGACTCGCAGCTGCGCTCCATTTACCACCTGGCCTGCCCGCAGTGCGGCGATGACTTTAATACGCCCAGCAGGAAGCAGTGGCGCGATCACATCAATGTCTTTCACGGCCTCGCCTCCCTGGATCTGCTGCACATGCACAAAGTGGGCGAGGACGAGGATATCTATCGCTGCCAGGACTGTGACGAGGAGCTGCAAACGAATCGCCAGTGGGTGCTGCAATACCACCGCTTCCAGCATCTGCCACAGCCAGCCTACATCCGCTGCCAGCTGTGCGAGCAGAACAGTGAGCGGGATGCGACAGTAGCTTCCGGCATGCACAGTCTCCGGGAACTGCAGCAGCATCTCCGCAAGCATCATTCAACAGCAGTGGGCGAGAACGAGATGTGTGTGCTCCGCGAACAGATTGTCCAGGAGGAGAAGGAGCAGGAGGAGACAGTGGGCCTGGTCGCAGAGGAAGAAGACAACCAAGCTGGTCAGGACTCCGCCGGGCCCTATATGCCGCTTCCGCCGCATTTATTGGACGATGGAGACGACGTGGAATTTGAGGACCAGTATCTGCTGGGCTAG
Protein Sequence: MEGMDLWTSMFSSEFEDGEPEGGGEAELLEGGENGTQFGNGNGDFLDDTAILEAGDAVDDLLDGEDGEREEEDELDESEKGSKGPEPDDDALFDFELEPIVSIGETQPTTAGAVLAPAGPMGASHVRPALQRHSLPALSRPRSIGFPVRPTTSQINATDENGVPINYELGVVYICPACGGEFRQQDHWKRHMNQIHRYNTLRGLNFAPLDKLYQRCKECHKRIAMHSRENLLKHKFTHLPFRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGYNAAGRKTRVRESRTEQLQREKSFLEDEDRIEVRNELLEPDLDESGGGMEQQSLEEPLCKKRSGGGGEAAELCEDYIHYMCPDCGTECDTHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKKIVTPNTIKSLRSHKFSHLSHPEWLRCKLCYKGYTDHHELVRHLLKQHHLETLMSENDPENEDGEVTLPADDCQDNENGERNGAALDEDSPYFEDAPRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHWRTHVVMAHSMNDLSKLNFEMINERQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRIGCEPRKSGGAQTTAKQPRKQIVTVANETYEIIYLDDVEQSSLEEEENDFGEQMLADEEDYPLPPLPQQQPRQLPPPPRPSSVQNNQQRYKCVHCSTLFPTQVAVRLHISENHCRKPNQKGRRHRHALSHPGGSDSGLNTVEQNYIFLCPSCGKEYKTQYEWRRHINEEHNFDKRNYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRARHNIYDRESPLIVTKPKNVYGRGKDKDMEKAPLTAPAPPAGSPPGCSSSSAAAAPPSVVSRTLKPQPGDLPTRPAGLNTLEDSISYHNAVDMDFITYFCPKCNQNFDSHAFWRKHIVEHHNFNSREGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPHRSFKCLTCDASFVRKQMFFKHLNRDTNRCDNRPQRELDEEEPIEDSQLRSIYHLACPQCGDDFNTPSRKQWRDHINVFHGLASLDLLHMHKVGEDEDIYRCQDCDEELQTNRQWVLQYHRFQHLPQPAYIRCQLCEQNSERDATVASGMHSLRELQQHLRKHHSTAVGENEMCVLREQIVQEEKEQEETVGLVAEEEDNQAGQDSAGPYMPLPPHLLDDGDDVEFEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00492530;
90% Identity: -
80% Identity: -