Basic Information

Insect: Drosophila parvula
Gene Symbol: -
Assembly: GCA_018904695.1
Location: JAEIIG010035903.1:418-4518[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0048 0.36 11.4 0.7 3 23 250 271 248 271 0.95

2 10 0.012 0.91 10.1 4.6 2 23 392 414 392 414 0.91

3 10 0.0054 0.41 11.2 2.3 3 23 493 514 491 514 0.94

4 10 0.11 8.3 7.1 3.5 1 19 619 637 619 642 0.94

5 10 0.00019 0.014 15.8 0.2 2 23 754 776 753 776 0.96

6 10 0.0011 0.084 13.4 0.2 2 23 822 844 821 844 0.92

7 10 0.0093 0.71 10.5 3.6 2 23 898 920 897 920 0.96

8 10 0.091 6.9 7.4 4.2 2 23 934 956 933 956 0.92

9 10 0.0019 0.14 12.7 0.7 2 23 1026 1048 1026 1048 0.95

10 10 0.042 3.2 8.4 0.6 1 23 1150 1172 1150 1172 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0048	0.36	11.4	0.7	3	23	250	271	248	271	0.95
2	10	0.012	0.91	10.1	4.6	2	23	392	414	392	414	0.91
3	10	0.0054	0.41	11.2	2.3	3	23	493	514	491	514	0.94
4	10	0.11	8.3	7.1	3.5	1	19	619	637	619	642	0.94
5	10	0.00019	0.014	15.8	0.2	2	23	754	776	753	776	0.96
6	10	0.0011	0.084	13.4	0.2	2	23	822	844	821	844	0.92
7	10	0.0093	0.71	10.5	3.6	2	23	898	920	897	920	0.96
8	10	0.091	6.9	7.4	4.2	2	23	934	956	933	956	0.92
9	10	0.0019	0.14	12.7	0.7	2	23	1026	1048	1026	1048	0.95
10	10	0.042	3.2	8.4	0.6	1	23	1150	1172	1150	1172	0.99

Sequence Information

Coding Sequence: ATGGCTGCATCCATATATGCCACCCCACCGCCAGATCTGAGCAGCGAGGACACTGCTCTCTCCGACGTCTCCAACTCATCGACACTGAACACGAACCGCAACAGCAACAGCAACAACACACATGAAGCCACAGGAGCAGCATCCCGAGAAACAGCATCAGCAGGAGGGGGAGGAGGAGCAGGAGCAGAAGCAGGAGCAGGGGGAGGAGCTGGAGTGGGAGTCATTTCACCCGTTGAGCACTTGGTCAAGCCAATGGAGCTGGAGATGGAGCCACAGCCGGCGGGAAGCAGCACAACTGAGCCGGAGCCAGAGCCGGAGCAGGAGGAAAGGCACAAGGACACCGAGGAAGCGATGGATGAAGAGGAGGAGGAGGGAGATGCCCACATGGCCACCATGGCGGCAGCCATGCAGCTGCAACTGCTGGAGGCTTTGAGCGATGCGGCCAAGAAGCGACGCAAGCAGCACAATCCCAGCCGCCTGGAAGCGCTCAATCTCAGCGGCGAAGCTTCTGGGCAGAAGCGAGGTGACTCCACCGTGGACTACGAGGAGAAGCTGTCCAAGATGTTCCTTCCCAAGTCCATTGAGCAGCTGAAGGAGACCTTCGAGCTGCTGCAGCAGCACAAGCAGGAGGAAGAGCAAACCGAGCCCGAAGCCGAGGCCGAACCCCAAGCCGAGCCAGAAGCGGAAGCCATGGCAAACATATCAGAGCGAGCGAGCAAGGATCGCGAGAATCCCTACCACACCTTCTGCAAGCAGTGCGGCGAGAACTTCGAGACCGAGTTCAAGCTGAGTCTGCACATGCTGCAGGACCATGGCGACGATCGAGCGGGCGACCAAGATCCCGCCGACTTCCTGGCCTCTATCAAGGTGAAGCTCGAGCGATCCGAGAGCCCCAGTCCCCAGCAGGAACATCAGATGCAGATGCAGCAGCACGATCTGACCAACGGTCACGGCAAGGACTTGGAGCGCGAGCAGGAGCATTGGTTCCAGGCCATGCAACAGGCTCAGGCCCATCATCCGCATGCTGCCCAAATGCCGCCGGCGTTCCCCTTTCCCCCAGAGGCAGCACTAGGAGTCGGTCCGGCTGGCTACCTGCCCCTCTTGGGAATGTCCGGCTTTCCGGGAGTCGACGGCCTGAACCGCCCGCCGCTGCGAATCTTCAATCCCGAGGCCTACTGCGAGCTGTGCAACAAAGAGTTCTGCAACAAGTACTTCCTCAAGACGCACAAGGCCAACAAGCACGGCATCTTCGATCCCGTCGGCGAGCCCAGCACCACCAACGCTTCCAGCCACCACAACAACAATAACAACATCACCAGCAGTAATAACAACAACAGTGGACACCCCACCAATCCCGGCCTGAGCTCCATGAGCCAGATGTTCCAGCTGCAGCGAGAGGCGGCCCAGGTGGCCAAGCAGGATCAGGTATCAGCCAGCGGGGCAGTAGGATCCTCTGCTCCCGTGGCCACGGTCCACTGTGACATCTGTTCCAAGCGATTCACCAACGTCTTTGCCATGCGCCGCCATCGGGCCAAGCAGCATGACTCACTGCCCTCCGCCCAGGACTCGCCCAATTCCCAGACACAGACGCCGACCCAGTCACAGTCGCTATCCCTGCACGGCAGTCCCAGCGAGCCACCGCAGCAGGCCATAAAACAGGAAATGCCGCAGGAGGTGGAGCAGACTAAGCCGTACCAGTTGCCCGATGGTTTCCGCGAGGACTTCACCTTGGAGCAGGAGGAGCTGAGCTTTGTGCCGCCGCCCCGGAAGCTGCCGTCACACCTACAACAGCAGGCCAAGGAGGCCAACTTTAGTCCGGACAAGCTGCGTCGCCTGGGCGTTCAGTTTCCGGAGTTCTATTGCGAACTGTGCCACCGGGAGTACGCCAACAGGTACTTCCTGCGCACTCACAAGTGGAAGCGACACGGCCTATTCGTGCCACCGGAAGAGGTGTCTCCGCAGCAAGCCGGCAAAGAGGAGGCCCAGATGAGCGCCTGGCCCTTCATGCCGCTCAACCTGATGCTAGCCAAGGCGGCGGCAGCCTCCATGGATCAGCAGGAGCTGGACCAGGAGCTAACGGAGGCGGAAGCCGACGCCGAGCAGCCCAACAAGCGGATCAAGCTGGAACAGCAAGAGGCGTCGCCGACCGAGGGCTACGACGAGGAGAAGGTGAACGGGTCGGTGGTGGGACTGCAGAATCTCCAGAAGCTCCAGTCCATGCTGCAGCAGCTGAACGACATCAACGGAAAGCGTCCGCTGCCGTGTCATCTTTGCGGCAGGGAGCTGGAGAACCAGTACGCGCTGAGGGCTCACCTGATGACAGAGCACGCGGGACAGATGCAGCTGCCCATGCCCATTCCCATTCCCTTGCCCGATCAACAGGCGGCGCATCCCATGGCCGGCTTGTATCATCCCCAAACTCCGCCGGGTCCCGCCGCTAGATCCTCGCCCATAGGCGACCTGCGGTGCCAGCAGTGCGATCGGGATTTCGCCACGGCCCAGGAATTCAAACAACATATCGCCGAGGTGCACATGGGCGGCCGGAATGGAGGACTCGGAGGCAGTCCCCTTCGCGAGGGCTTCTTCACCCCGGAACGGCCGGTACCGCCACCACCTGGCGCCGGAGGGGCTGCCCCAGCCGGAGCTCCGCCGGGCAATCGTCCGGCGTACACCATCACGCCGACCAGCAGCTACTGCGAGATCTGTAACAAGGAGCTGTGCAACAAGTACTTCATGAAGACGCACATGCAGCGGATGCACGGCATCGAGATCGAGAACGGAGCCCAGATCGGCGGCGTGGTATGCAACATCTGCAACAAGGAGCTCTGCAGCAAGTACTTCCTGCGGGTGCACAAGCACAACACGCACGGCATCATCGAGGAGGGCTCCCCGCTGCCGCAGCCGCGGGGCCAGAATGGTGTCAAGATGGAGGCAGCCGCCGCGGCAGCAGCTGCTGCAGCCTCGCAGACCCAATCGCAGCCAGCTGCAGCTCAGCCGCAGGATCAGGAGATTAATGTCTCGCCACCCACAGTGGAGGGCACCTCCAGCTCCAGTTCGTCCGGCATAAATCACGAGGTGTGTCCGCTCTGCTCGAGACAGTTCCGTAGTTTCAAGTGGCTGCGCTCACATCTGATGAACGAGCATGGATCCGCGGGAGTGGAACGCCTCCGTGAGATGGAGCCCACTCCGGCCTCGGGACGCAGCAAGCCCAACAGTCCCACGCTCAAGATACCCAACGGCAGTGGCAACGGCAACCCGACTCCGGCGGGAGCAGGAGCTGGAAGTGCCGCTCCCAATCTCGCCCAGGCCCTGCAGAACCTCAATGCCCAGCACCTCTTCGGCCAGATGCAGCAACAGCAGCAGCAGCAGCATCAACAGCAGATGCCCAAGATGCCGCCACTTCCGCTGCCCGGGATGTTCGGTGAGCAGGCGGCCAGGTTCAAGGAGTACCAGTGCTCATTGTGTCCCTTCACCACGCCCTACTACGCCTTCCTCTTCATCCACGAGCGCTCACATGCGCTGCTCAACAACGGAGGCGACGGCATGGAACTGCCCATGGAGACACCCCCACCGCAGCCGGCGAGGAATTCGGGCAAGTCGCGCAGCAAGTCCAGCAAGGCGGCAGCTGTGGTGGCACCTTCAGAACCCGCGGAACTTCCTGTGGAACCCACCAACCTCAGCACATCGGCAGCCAAAATCACGCCATCAGCCGGATCTCCGGCCAACTCCTCCCCCAAGGCAACCAGCTCAACAGCATCTCCCAAGATTCAACGCCGTCGATCCTCCTCGAAGCCACCGACCACGCCCAACGGCCTGGGCAGTGGCAACAATGGCATCGGAGCCGGAAACGGAAGCGGTGGCCATCGCTCGGCAGCCACCTCGCCCTTCGAGGGCTGCGGGGAGCTGGCCAACGGTAGCGGCAAGCCGGCGAGCTATGCGCAGCCGGATCGGTCAGAGGAAGCATATCAGATGCAGGCCTTCCACCTGCAGCCCGCCGACGCCGACTCGGAGATGCAGTTCGCACCGGCCCTTGTCTACCTTCCGGTGCGGGTGCGGGCCTCGGAGTCGGCCACGCTCAGCTTCCGGCTCACACCGGCCTAA
Protein Sequence: MAASIYATPPPDLSSEDTALSDVSNSSTLNTNRNSNSNNTHEATGAASRETASAGGGGGAGAEAGAGGGAGVGVISPVEHLVKPMELEMEPQPAGSSTTEPEPEPEQEERHKDTEEAMDEEEEEGDAHMATMAAAMQLQLLEALSDAAKKRRKQHNPSRLEALNLSGEASGQKRGDSTVDYEEKLSKMFLPKSIEQLKETFELLQQHKQEEEQTEPEAEAEPQAEPEAEAMANISERASKDRENPYHTFCKQCGENFETEFKLSLHMLQDHGDDRAGDQDPADFLASIKVKLERSESPSPQQEHQMQMQQHDLTNGHGKDLEREQEHWFQAMQQAQAHHPHAAQMPPAFPFPPEAALGVGPAGYLPLLGMSGFPGVDGLNRPPLRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIFDPVGEPSTTNASSHHNNNNNITSSNNNNSGHPTNPGLSSMSQMFQLQREAAQVAKQDQVSASGAVGSSAPVATVHCDICSKRFTNVFAMRRHRAKQHDSLPSAQDSPNSQTQTPTQSQSLSLHGSPSEPPQQAIKQEMPQEVEQTKPYQLPDGFREDFTLEQEELSFVPPPRKLPSHLQQQAKEANFSPDKLRRLGVQFPEFYCELCHREYANRYFLRTHKWKRHGLFVPPEEVSPQQAGKEEAQMSAWPFMPLNLMLAKAAAASMDQQELDQELTEAEADAEQPNKRIKLEQQEASPTEGYDEEKVNGSVVGLQNLQKLQSMLQQLNDINGKRPLPCHLCGRELENQYALRAHLMTEHAGQMQLPMPIPIPLPDQQAAHPMAGLYHPQTPPGPAARSSPIGDLRCQQCDRDFATAQEFKQHIAEVHMGGRNGGLGGSPLREGFFTPERPVPPPPGAGGAAPAGAPPGNRPAYTITPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIIEEGSPLPQPRGQNGVKMEAAAAAAAAAASQTQSQPAAAQPQDQEINVSPPTVEGTSSSSSSGINHEVCPLCSRQFRSFKWLRSHLMNEHGSAGVERLREMEPTPASGRSKPNSPTLKIPNGSGNGNPTPAGAGAGSAAPNLAQALQNLNAQHLFGQMQQQQQQQHQQQMPKMPPLPLPGMFGEQAARFKEYQCSLCPFTTPYYAFLFIHERSHALLNNGGDGMELPMETPPPQPARNSGKSRSKSSKAAAVVAPSEPAELPVEPTNLSTSAAKITPSAGSPANSSPKATSSTASPKIQRRRSSSKPPTTPNGLGSGNNGIGAGNGSGGHRSAATSPFEGCGELANGSGKPASYAQPDRSEEAYQMQAFHLQPADADSEMQFAPALVYLPVRVRASESATLSFRLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00594085;
90% Identity: iTF_00533328;
80% Identity: -