Basic Information

Insect: Drosophila parvula
Gene Symbol: BCL11A
Assembly: GCA_018904695.1
Location: JAEIIG010009281.1:12614-21340[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.023 1.7 9.3 2.4 1 23 262 285 262 285 0.95

2 6 2.3e-06 0.00017 21.8 1.0 1 23 728 750 728 750 0.97

3 6 0.011 0.8 10.3 4.7 1 23 756 778 756 778 0.99

4 6 9.9e-07 7.5e-05 23.0 3.2 2 23 1055 1076 1054 1076 0.97

5 6 1.3e-05 0.00098 19.5 3.3 1 23 1082 1104 1082 1104 0.99

6 6 2.4e-05 0.0018 18.6 0.4 1 22 1112 1133 1112 1133 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.023	1.7	9.3	2.4	1	23	262	285	262	285	0.95
2	6	2.3e-06	0.00017	21.8	1.0	1	23	728	750	728	750	0.97
3	6	0.011	0.8	10.3	4.7	1	23	756	778	756	778	0.99
4	6	9.9e-07	7.5e-05	23.0	3.2	2	23	1055	1076	1054	1076	0.97
5	6	1.3e-05	0.00098	19.5	3.3	1	23	1082	1104	1082	1104	0.99
6	6	2.4e-05	0.0018	18.6	0.4	1	22	1112	1133	1112	1133	0.97

Sequence Information

Coding Sequence: ATGGAGAACGATGCCGTGGCCACCCAGGACATCCTCACGTGCGGCGCCTGCCAGAAGGCGTTCGCCCTCTCGGACATTGTCAAGTTCATCCAGCACAAGGTGTTGCAGTGCAACAAGGAGAACTATGGTCAGTGCGCCACCCAGAATCCGCAAATGGATCGCGATGCGGAGGAGGGTCGTCCGCTGAGTCTGGTCAATCGCCGGCCCTCGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCAGCAGCACGGCCAGCGGTTCGCGGATACACACACCACCACCGAGTCCGGCGGATCTGTTGGCCGATGGTGCCAGCAGCACGCCCAAGCGGCTAGTAGATGAAAATGACAATACCACGCCCAAGGATAGCGAGACGACGGCCACCACCTTGGACTCGAATGCGGCACCCGCGAGTCCGGCGGCCATTGAACGCCAGTCGACCGGCGACAGTAGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCTTAGAGGATGACGAGGATGAGGAGGAGGAGGAGGAGGAGCGCGAACAGTCGGCGGCCAAGCGCCCCAAAATGGAGCTGGTCGATGCCGAGGCCAACACAGTCCACACAGAGCCCAGCAACTACACCTGCTCCACGTGCAAGACCCGCTACACCTCCGCCTGGCGACTCATCCAGCACGTCCAGCACTCGCACGGCGTCAAGATCTACGTGGAGAGTCCGGGCGGCAATGGTGCCACCTTGACGGTGGCCACTCCGGCGGCTCTCAACAACAGCGCCCTTGCCCTGGCCGCCGCTGCTGCTGCCGCAGCTGCAGCCGCCTCTGGAATGGCGAGTCCACAGCCAGCGGCAATGAGTCCCAAGAGGAGCAGTCCCTCGTCCGTGGCAATCCTCTCCAGCTCCGTGAGCTCCGTCGGCTCCAATTCGCTGGTGAATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAGAATCTGGCCTCGGCCATGGCCGCCGGTATGAGGCATCATCCGTTGCTGCCGCCGCCGGAGGCCATGCATGCCAATCCCTTCCAGCTGCTGCGCATGCCGCTGCCCGGCAATGTAGTTCCTACGGTGGCCCCCCTATTCGGCCGCCCCTCGCCCGCCGATCACTACCGGATGGAGCAGCTGGTGAGCGAACAGTTCCGCCACCATGGCTTCAATCTGGCCGCCGCCGCGGCCGCTGCCCAGGCGCAGGCCTTCAACGGTGCCGGCGTCCAGGTGCAGGTCCAGGAGCCGCGTCCCCCCTCGTCCAGCAGCAGTGGCAGCCAGCGTGGATCTGTGCCGCCGGCAGCCCTGCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAGAGCGGGCAGCAGGCACAGAATGTGCAACAGACGCCGCCGCCGCAACAGCTAACGCCCGGACTGATGGGCGGCATTGGCGCCGCCTCCCTGAAGCTGGAACCGCAGCAGATGGATTTTTACTCGCAGCGATTGCGTCAGCTTGCGGGCACAACAAGCCCTGGAGCTGGCAGCACTGTTAACTCGAGCTCGCCGAGTCCCCGACAGAAGCAATCGCCGCACTTCGCGAGCCCCTCGCCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCACTGATGGTGGGCCATCCCACCCGACCCCACTCCCTGACGCCGCCCGAAAAGACCGGCTCAACCGGTGGAGCAGCCTCGGAGAATGGCGGTCTGGGCCTAATCCTGGCCAGCACTCCGCGTTCGGCCAGCACGCCGCCCTCGAAGACGAGCAGCGGCCAGGAGCAGATGATCCAGCAGGAGCACTGCTTCGCCTGCGGCTACTGCGACAAGAAGTTCCGCTTCGAGAACAACCTGATCATCCACCAGCGGACGCACACCGGCGAGAAGCCCTACAAGTGCACCGCCTGCGACTTTGAGTGCTCGCACATCCAGAAGCTGATGAAGCACATGCGTGTCCACCGCAGTCCGGCGGACGAGCAGGACGATGGCAGCAACGATGGCGCCGACTCCCTGGAGACCAACGAGGCGGACAACGACGAGGATCCGAATCCCGACGAGTCCGAGGAGGAGATGGGCGACAACGATCCCGACAATGATCCCGATAACGACAATGACGGCGACCTCGATGGCGAGGAGGAGGACGAGGACGAGCTGGACGAGTGCGAGGACATGGACTACAAGGCCGAGGATCTGAGCGTCAGCAATCGGCTGGACGGCAAGAGCCAGAGTCCCAAGACGACCAGCTCGGGTGCCACCTCCCTGGTGGGTGAGCTGATGGACAAGTTCGGTCTGTCCAACATCGCCCAGTACAGCGAGGCGTACAAGCAGGCCCTGCAGGAGTCCGGACGCAAGGAGGCGGCAGCTGCCGCCGCTGCAGCCGCTGCTGCTGCCGCCGCCGCCGCCGCTGCGGACAATAATAATCGCGTTGGCGGCGGAGGCGCCGTCGGTGGGGCTGACAAGCTCAATGGCCTGCCCGTGGCCGCTCTGAGATTACGCGACGAGTTCGCCAAGAACTGCAACATGTTCCAGCAGGATGCGGCCGCAGCTGCCGCTGCCGGCGGTGCACCGTCGCAGGTGCCGCTCTTCAATCCCTTCCCCAATCCCTTCGAGCTGAGCAAGCGCATGAAGATGGACGGCGGCGATTGGTGGGGCATGTCCCAGGCCCTGCATCGCAACGAGGCGGCCCTCTTCGAGAACCTCAAGCTGAAGCCGCTGGGGCTGGGCGGTGGCGCCAACTCGCTCATCCAGGGGCCGCTCCTCAAGAAGGAGAGCCGCCAGCGTAACGATACCTGTGAATTCTGCGGCAAGGTCTTCAAGAATTGCTCCAATCTCACCGTTCACCGGCGCAGCCACACCGGCGAGAAGCCGTACAAGTGCGAGCTCTGCTCCTACGCCTGCGCCCAGAGCTCCAAGCTGACGCGGCACATGAAGACGCACGGCCGGACGGGCAAGGATGTGTACCGCTGCCGTTTCTGCGACATGCCCTTCAGCGTCCCCTCGACGCTGGAGAAGCACATGCGCAAGTGTGTGGTGAACCAGGGTAAGGCGGCGGCCGCTGCGAATGCCGTGGCCGCGGCACAGGCAGCCCAGGCGGCGGCCCAGCAGCTTCAGGCGGCGGCAGCGGCCCAGGCGGCCCAGCATGGCCAGCAGCAGCAGCAGCAACAGCAGCACGGACAGCAGCAACAGCAGCAGCTGTCGCCCATGGGCGTGGTGGGATATCCGCCGCAGTTCAACCTGTCGCTGCCGGGCAGCGTGTCCGGTGACAATGACTCGAATGCCTCCTCCAGCATGACCGGTGTCCATCCCATATCGCTCAAGGAGGAGGCATGA
Protein Sequence: MENDAVATQDILTCGACQKAFALSDIVKFIQHKVLQCNKENYGQCATQNPQMDRDAEEGRPLSLVNRRPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSTASGSRIHTPPPSPADLLADGASSTPKRLVDENDNTTPKDSETTATTLDSNAAPASPAAIERQSTGDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLEDDEDEEEEEEEREQSAAKRPKMELVDAEANTVHTEPSNYTCSTCKTRYTSAWRLIQHVQHSHGVKIYVESPGGNGATLTVATPAALNNSALALAAAAAAAAAAASGMASPQPAAMSPKRSSPSSVAILSSSVSSVGSNSLVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLASAMAAGMRHHPLLPPPEAMHANPFQLLRMPLPGNVVPTVAPLFGRPSPADHYRMEQLVSEQFRHHGFNLAAAAAAAQAQAFNGAGVQVQVQEPRPPSSSSSGSQRGSVPPAALPXXXXXXXXXXXXXXXXXXXXXXXXXXXQSGQQAQNVQQTPPPQQLTPGLMGGIGAASLKLEPQQMDFYSQRLRQLAGTTSPGAGSTVNSSSPSPRQKQSPHFASPSPAXXXXXXXXXXXXXXXXXXXPLMVGHPTRPHSLTPPEKTGSTGGAASENGGLGLILASTPRSASTPPSKTSSGQEQMIQQEHCFACGYCDKKFRFENNLIIHQRTHTGEKPYKCTACDFECSHIQKLMKHMRVHRSPADEQDDGSNDGADSLETNEADNDEDPNPDESEEEMGDNDPDNDPDNDNDGDLDGEEEDEDELDECEDMDYKAEDLSVSNRLDGKSQSPKTTSSGATSLVGELMDKFGLSNIAQYSEAYKQALQESGRKEAAAAAAAAAAAAAAAAAADNNNRVGGGGAVGGADKLNGLPVAALRLRDEFAKNCNMFQQDAAAAAAAGGAPSQVPLFNPFPNPFELSKRMKMDGGDWWGMSQALHRNEAALFENLKLKPLGLGGGANSLIQGPLLKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAANAVAAAQAAQAAAQQLQAAAAAQAAQHGQQQQQQQQHGQQQQQQLSPMGVVGYPPQFNLSLPGSVSGDNDSNASSSMTGVHPISLKEEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -