Basic Information

Insect: Drosophila parvula
Gene Symbol: -
Assembly: GCA_018904695.1
Location: JAEIIG010035269.1:82021-83787[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.9 3e+02 2.2 0.4 1 23 23 49 23 49 0.86

2 8 0.013 1 10.0 0.1 1 23 381 403 381 403 0.97

3 8 0.00057 0.043 14.3 3.8 1 23 409 431 409 431 0.98

4 8 1.4e-06 0.0001 22.5 0.5 2 23 438 459 437 459 0.97

5 8 0.0002 0.015 15.8 5.4 1 23 465 487 465 487 0.98

6 8 0.00048 0.036 14.5 1.2 2 23 494 515 494 515 0.97

7 8 2.7e-05 0.0021 18.5 3.0 2 23 522 543 521 543 0.96

8 8 5.5e-05 0.0042 17.5 0.1 1 23 549 571 549 571 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.9	3e+02	2.2	0.4	1	23	23	49	23	49	0.86
2	8	0.013	1	10.0	0.1	1	23	381	403	381	403	0.97
3	8	0.00057	0.043	14.3	3.8	1	23	409	431	409	431	0.98
4	8	1.4e-06	0.0001	22.5	0.5	2	23	438	459	437	459	0.97
5	8	0.0002	0.015	15.8	5.4	1	23	465	487	465	487	0.98
6	8	0.00048	0.036	14.5	1.2	2	23	494	515	494	515	0.97
7	8	2.7e-05	0.0021	18.5	3.0	2	23	522	543	521	543	0.96
8	8	5.5e-05	0.0042	17.5	0.1	1	23	549	571	549	571	0.96

Sequence Information

Coding Sequence: ATGCCGCCATATCAGCGCTGCGGCGACATCGTGTGCTTTTGGAAGCGCCAGACACGCACCTTCGCCTTCCAGTGCATCTACTGTCCGGATCCAGTGCGCACAACGACCACATTCAAAGACTTCAAGTCGCATTTAGAGTCGGAACACTCGGATTTGTTTGAAGATCGAGAAAAAGAGGACATTAAGCCATGGGCGGAGCACAAGACACCGCGCACTCATGCTGGCAGCGATTCGGACGGAGTAGCCACGACCAAGGAGGAGGATCCGCTGGAAATGGACATATCCTACCAGGTGAAAGAGGAGGAATCCTCGCCAACCGATTCGGAGGCGGAACAAGACATGGATATATGGTCAGAGAGCGATAGTCAGAGCGTAACGTCATTAGAATCCACCAGCCAACAAACGGAAACTGTGAGTAACCCGAGTGTCACAGACACCTCACACTTTTGGCTGCAGGAGCATCCCATTATGCTGGCGTTCATAGCCCAACTGGAGGAGCAACGCCTGCTCTGGGATCTGGGCCTGGTGGCCTACAGGAACTACACGCGACGCAGCGAGGCTAGCGAAAAGATAGCCGCCGACTTGAATTCACAATTCGAACTGAATCTCACGGGCCAGGAGGTGGCGGCCCATGTCAAGCTCCTGCAAGATGCCTACCGGCGGGAGACAGTGCGCCTGGAGCAGCCCACAGAACCGCCGGCTACCGCGGAGTGGTTCTACGGCAGACTACACTTCCTGGCGAGCAGCACCTTGCCGCCGCAACGCCAGCCCAAGATGCTGGGCGAGTCGGAGGGGGCAGAGACGACGGAGTCGGGTCCCGTGCCCCGGCTGAATCATGCCCAGAATCTGAAGCTCATCGAGCTGTATCGCCAATGCCGACCAAACTGGGACATGCAGGACATGACCTGTCGGCTTCGTACCGTCCGCCAGGCGGCCAGGGATCGCTTGCTGGAGCTGTGCCGCATCGAGCTACAGATACCCCTGGAACCATCGCAGCTCCAACTGTTTATTCGACGTCTACGGAACACCTATCACCAGGAGAAGGTGCGTCGCCTAAAGAGCGAGCGGCTGGGCAAGGTGTTTCGCTCCCGGTCCCGCTATTACGAGAAGCTCGCCTTCCTCGAGCCCCACATGGCCCCGTTCCAGTGCGACCTCTGCCCGGAGGTGCTGAGCAGCGTGGACGGCTACCGGGTGCATCGGTCGCAGCACGACGGCAGCCTGCCCTTTGTGTGTCCCACATGCGGCCGGGGCTTCTCCAAGTGCGGCAACTGCACCATCCATTTGCGCCGCCACACGCAAGACTACCACCTGAGCTGCGAGGAGTGCGGCAAGAGATTTGCCACCACCACGGACCTGCAGGTCCATCGGCGCTCACATACCGGAGAGCGACCCTATTGCTGTCACATCTGTGGCGGACGCTTCAGCACCGTCTCCTTCCTGGAGCGGCACAAGCGGCGACATGAACAGCGATCGGTGGCCAAGTGTCATATCTGCGGGAAGGGTTTCTTCGAGCGCACAGTGTTGAGGGATCACATCAAGGGCCATCTCGATGTGCGGGACAAGGAGTGCGATGTGTGCCACAAGCGGTTCACCAGCGCCAAGTATCTGCGGCGTCACAAGGAGATCCATGACGAGCACAAGCGATATCTGTGCAAGCTATGCGGCAAGGGATTCGCCCAGTATGCTGGTCTCAGCGGGCACATGAAGTCGCATGTTCGCAAGAGAGACACTGGCCCCGCCCCCCCGACACTGGACAACTCCTTTTGA
Protein Sequence: MPPYQRCGDIVCFWKRQTRTFAFQCIYCPDPVRTTTTFKDFKSHLESEHSDLFEDREKEDIKPWAEHKTPRTHAGSDSDGVATTKEEDPLEMDISYQVKEEESSPTDSEAEQDMDIWSESDSQSVTSLESTSQQTETVSNPSVTDTSHFWLQEHPIMLAFIAQLEEQRLLWDLGLVAYRNYTRRSEASEKIAADLNSQFELNLTGQEVAAHVKLLQDAYRRETVRLEQPTEPPATAEWFYGRLHFLASSTLPPQRQPKMLGESEGAETTESGPVPRLNHAQNLKLIELYRQCRPNWDMQDMTCRLRTVRQAARDRLLELCRIELQIPLEPSQLQLFIRRLRNTYHQEKVRRLKSERLGKVFRSRSRYYEKLAFLEPHMAPFQCDLCPEVLSSVDGYRVHRSQHDGSLPFVCPTCGRGFSKCGNCTIHLRRHTQDYHLSCEECGKRFATTTDLQVHRRSHTGERPYCCHICGGRFSTVSFLERHKRRHEQRSVAKCHICGKGFFERTVLRDHIKGHLDVRDKECDVCHKRFTSAKYLRRHKEIHDEHKRYLCKLCGKGFAQYAGLSGHMKSHVRKRDTGPAPPTLDNSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00594765;
90% Identity: iTF_00526084;
80% Identity: -