Basic Information

Insect: Drosophila parthenogenetica
Gene Symbol: -
Assembly: GCA_035047505.1
Location: JAWNPM010000182.1:6084540-6091403[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00028 0.021 15.4 1.5 1 23 1185 1208 1185 1208 0.98

2 8 0.22 16 6.3 1.0 1 23 1213 1236 1213 1236 0.96

3 8 0.00048 0.036 14.7 2.1 1 23 1489 1512 1489 1512 0.96

4 8 0.007 0.53 11.0 0.5 2 23 1521 1542 1520 1542 0.96

5 8 0.047 3.5 8.4 0.3 1 23 1549 1572 1549 1572 0.96

6 8 1.8e-05 0.0014 19.1 1.4 1 23 1578 1600 1578 1600 0.97

7 8 1.1e-05 0.00085 19.8 1.1 1 23 1605 1627 1605 1627 0.99

8 8 0.0033 0.25 12.0 6.2 1 23 1633 1655 1633 1655 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00028	0.021	15.4	1.5	1	23	1185	1208	1185	1208	0.98
2	8	0.22	16	6.3	1.0	1	23	1213	1236	1213	1236	0.96
3	8	0.00048	0.036	14.7	2.1	1	23	1489	1512	1489	1512	0.96
4	8	0.007	0.53	11.0	0.5	2	23	1521	1542	1520	1542	0.96
5	8	0.047	3.5	8.4	0.3	1	23	1549	1572	1549	1572	0.96
6	8	1.8e-05	0.0014	19.1	1.4	1	23	1578	1600	1578	1600	0.97
7	8	1.1e-05	0.00085	19.8	1.1	1	23	1605	1627	1605	1627	0.99
8	8	0.0033	0.25	12.0	6.2	1	23	1633	1655	1633	1655	0.99

Sequence Information

Coding Sequence: ATGGTAGCTAAATTCCGTCGGCGTTGTGTCCGCGTACAGCAGCGACTGCACGAGTACGCGCAGGGTATTGCCGAACGACAGGCTAGACGGCGGCTGATTGGCGGTGATAAGCGATTGGAGGTggaacaacaaccacaaggaGTGAAACAAGAGACGCCAAATGAGCCGGATGTCAAGGAGGATTATATGCATTTGCCGGAATCGCAATTGGAGCGCAAGCGTCGTTTGGAATCTCGTCATccggaattggaattggaactggaattggaattggaaccAAAACAGGTGCACCCAGGTGCAACAGCACCCAAATTGCGTCGTCTCGATTTGCGAAACCCTGGTGCGGCAACCCTGCCggtaaaaaataacaatgagACTGAAACAACAAAGACGTTgccgaaaaaggaaaaaggtGAGAAAACCCTCACAAAATCGCCACACAAAAAGGTTCGGGTGCCATGGAAAACAAAGGCCGCTCGCAAACAGCATTCCGAGTCCCTATCCAGCTGTTCGACAGACTGCCGAGTGACACCGGAGAAGATTCTCACACAAGATATTGTTGTAATGgaaacaacaacggcaacaacaacaaccagtcAGCATCAAATTCCGCATTTAGTTGTTGCCTCTACAGAGCCGACATCCTCATCAAACTTCTCATCTTCGTCCTCGGGACAGACATCACCCGAACATCTCAGCGATCTATCTGTGAATCCATGTCGTGGCTTTGCAAGCGACGGAAGTTCCTCGTCGTCTTTATCCCCGTCCCTCTCAAATGCCGACGGCAATTCCACAAGTGTTTTGAATGCCAAAAGACGGTATCCACCCAAGAATAGTAGCGTTATCATGAGTCCAAGTAAATCCTCTATGGTGCTGCGACGCGGCCGTCGGGTGCGTAAGACGCTTGGTTATGTGCCAGCAAGGCGAACAAGACGTGCCATTAAAAAGACGgtgcaaaagaaagaaacgcTGGAAATTCCTCAGGTAGAGCTGCCCAAAAACAAGTCGGACctggacagcagcagcgaagcAAGTGAACAAGTTGAAAAGGAGTCACCGTCTAGCAGTACCGATCAGCGTTTTGCAGGTACTACAAAGAATGAGCAGTTAGCCCAAGTAGTCACAAAAGAAGAGGCTGAATTGTCGAAGTTGGAGGAGGACTTGAGCAGTGTTAGGCTAGAAACCGGTCAAGTGGAGGAATCAAGGCCACAGGAACAGGTTCAGGAGGAGCAGAAGGAAACACCGAGTGTGTCACAagtacaaataaatgaaacgaGTAAAGAGGAGCCAAAAGAACAAACTGCCACGATCTCAAATGGTATCGGAGCAACGACTGATAACAACAGTGAATTGGCAGTACAATTTGAGGAATTAACATCATCCACGGAGAACAATCGGTTGATGACACCCGAAGTGCCGTCACCCGAATGTGAAATGGAAGTAACCCACAACGATGATCAGCAGAATCCCGAGTTGATTGTCAGCATACCACTTGATGTGCTCGATGAAGAACTGCAGCGTCGCCTCTGTTATACCGAGTCGCATAATTGCGGTGGCGCTGCTCAGGCATCGTCGGATCTCAAGGATGACGATGTCAATAATAATGCAAATGGAGAGAATTTTCACCAGAGTGCTACAGAAGATAGCTTCAATTCTACTGTGGCACTCgaaaccaaacaaattgaagCAGATCCcggtggaggaggaggaggagtcgGAGGAGGAGAAGGTGTCGTGGATGACGACATGGAATCACTGCAGCAACTGGTGCACATGCCAGTGGAGCACCACGAAGATCTACACTTGACCAGCACGTGTGCCACTTCCATGGACTTTTTGGCCGAATTTGAGAAGCACTGCGAGAAGACATTGAAACTGCAAACGGGTCCAGGTACGGGGCCAAGGGAGTTGGAATTAGCACAGGCTAAGCAGCAGATGCAGGTGGAAATGAATGATGTGGAGACGACGCTGCATGGCATACTTAATGAGATGCAGGATCAGCATCTCTATACGCCCGTCTGCACCCAAATGGATGAGTTTCTAACGCCAGCGGATTATGCACCGCTCACCGAACCGGAAACAGCGTCACCAACACCAACGAGTGCCGCTGCGTCGCCGGTGCTCTATGAGCCGGATgtagtgcagcagcagcaacaacatcaagaacaacagcagcagcaacaccatgaacaacagctgcaacatcaacagcaccaacaccaacagcagcaacatcaacagcagcaacatccacagcagcaacaccaacatcaacaacaggtgcaccaacagcagcaggtgtTTGATAGCAGCAATTTTAGCAATGAACTGATTGGCTTTCAAAATGACATGCCGTGTTTTGAGAATATTGAAACCTCGCCCGAATCGTTGGCAGCGCAGCAAAGTCTGCACTTGGAGTTGACGCAGTTGCTCAATGACTTGCAGCCACCTATCGGCAATGTGAACAATGCCAACGGTaatcaacaacatcagcagctaCAAGAGCAATTGCAACACCAACATCAgcaattgcaacagcaacaacaagaacagcatcaacaacaccaacaacagcagcaacaactgttaCAACATGCGCAGGccacacaacagcaacagcaatcgctacaattgcagctgcaacaagaGACTGTCAACTATGATCCACTCTATCCGTCACCgcccgcagcagcaacaacgcccATTCCCAGCAACACCGCCAACACTGTGCAGCTCATCCAGGTGCCGCAGCAAGAGGCACTGTGGCAGGCACAGACAACACCCCATCAAACCACACACCTGCAATGGTCGACTGTGGGTGGACTGGAGTCCATCAAGACAATGCCAGTTGCCAGCTTAGAAGGTCTGGAAAACGGAGCTGCAGCGACAACTACGACGTACTACATCAATGCCAGTGATCTCTATCAGacgcaactgcagcaacaaacaGGAGGAAATCTGACGGGTGAAACCTACGCCCTGTTGGACAATAATGAGAACTATAtgttggagcagcagcagcaacaccagcaacaccaacagcaacagcagcagcaacaaccaatTATGATACTCATCCAACAGCCGGAGATGCAACAGCCTGTGGCATCTGCTAGTAACCCACATCAGGCGCCGTTGCACATTGCCTATGCACCACAAATCAATAATGAGATGCATGAATTTCAGTCGCAACCACAAgtccaacaacagcaacaaccacaacctcaaccgcaacagcaacagcagctgcagcactcgcaaccacagcaacagctgcaacaaccACATCCGCAACGACCACAACATTTAAAGCAACAGTGTtctcaacagcaacagcaaccacaacagcagcagggacaaccacagcaacagcaacaacaacaacaagtacaaaaacATACAGTATTAGGTTTACCGAAAACATCGGCCTCGCCTACTAGAAGAAGCCGTGCGCCGGTCTTGAGATGCCGTTTCTGCCAGAACGGGCCACGTTTCTCCAGCAGCTTGGAATACAGTCATCACATCATCGAACTACATCCGGCAGAGTCGCCCTTCACCTGTCCACACTGTCCCCAAACATTTGCCAGTCGCAACAAACGTAATCAGCACATTCTCACCGCTCACGTGGTGCAGCAGTTCCACTGCGGGCAGTGCTCTCAAATGTTTCCCGCTCAGCGTGCACTTGATCTGCATCTGCAGCGATTCCATGCGCCCGCTGGTGGAGCGGACACGGCAGCAGCTAATGCGGACGGTGTGCGATTGGAGGAGGTACAACTGCAGTTGGCATCCAAGGAtgtggaacaacaacagcaccacaAGTTGCTGCTGAGACAGAAACTGgagcatcatcagcagcagcagtcgcagccacaacagcagcagactcAACTGTCGCCACCAGATGTTGAGCAGCAAACAAGCCCATTCCAGACACGCAAGACACGCATTCTTGGTTGCCCCGACTGTGAGGACTGTTCACAGTCAACTGGTCATCATCACCGCAAGACTCAGCACTACCAGGAGCTTAGAAATGTGCCAATTCCGCCCACGGTGCCAACACCGCCCTCGACTATTGCGTCGCTGCCGTCGCCAAACCCACAACCACTGCCGATGCTGTCAACGCCACATATAACTCTGCCATCGCCGGAACAATCGGAACCGGATTCGACAACAGCGACGCTGCGTCAGTTCCGTAAACGCTGCACACTCGGCGGTAACTCGCCATCGCCGAcgacgacaataacaacaacagcagcagcgaactcggccgcagcagcagcagctgccgcggcagcagcaacaacactttTCATGACATCAGTGGCATCACCGTCGCCATCATcatcgccgtcgtcgtcgacCATGGAGTCGAGCAGTGGTGGAGGTAGCGTTGGTGGTGGTAGCACCGCTGGTAGTGGCACCGATAGTGTCTCACCACCTTCGGCCAACAAACTGCGCGGCAGCCATCAGTGTGTGATGTGCGAAAAGAAATTCACAAACATGATTTCATTGCGGAAACATCAGCAATTGGCCCATGATTCGCAGACTACAATGCCTTGGGTGTGTGCCATTTGCAAGCGTGGCTATAGGAAACGGACGGATATGGATAATCATATGAAATCACATGAGCCTAAGGGACGACCCTACGAATGCAACGAGTGCTGGGTTCGTTTTCCTGAATTCAAGCAGCTGGCCATGCATAAATTTACCGTCCACGAACTGATCAAGCCGCACACCTGCGACGAGTGCGGCAAACAATTTGGCACGGAGAGTGCTTTGAAGACGCACATTAAATTTCATGGTGAGCGAGGATTCCAGTGCGAAGAATGCGATGAATCTTTTGAGTATATCAAAGATTTGCGCAAACATCGACGCAGCCACAAAACCGAACTGTTTTACAAATGTGAACATTGTCCACGAACATTTCTGCATTTTACGAGTTTTCGCGCTCATATGAACACACACTTGCCAATGGGCGTATTCCTTAACGATAAACCAACTACACCGCTGATCATTAAAGCGGAGAATCCAGCCACGCCCCAAACAATTGAGGAATTGCAGCCACTGACGCCTCTAAGCAATTGCAATGTCAACAGTGGAGGTGAGGAGTGCCCCGGCTCCGTGGAGGCTGTGGAGAGCAGCAGTGTGGCACTACCACTGGAAATGATTGTTGATAAGCCATAA
Protein Sequence: MVAKFRRRCVRVQQRLHEYAQGIAERQARRRLIGGDKRLEVEQQPQGVKQETPNEPDVKEDYMHLPESQLERKRRLESRHPELELELELELEPKQVHPGATAPKLRRLDLRNPGAATLPVKNNNETETTKTLPKKEKGEKTLTKSPHKKVRVPWKTKAARKQHSESLSSCSTDCRVTPEKILTQDIVVMETTTATTTTSQHQIPHLVVASTEPTSSSNFSSSSSGQTSPEHLSDLSVNPCRGFASDGSSSSSLSPSLSNADGNSTSVLNAKRRYPPKNSSVIMSPSKSSMVLRRGRRVRKTLGYVPARRTRRAIKKTVQKKETLEIPQVELPKNKSDLDSSSEASEQVEKESPSSSTDQRFAGTTKNEQLAQVVTKEEAELSKLEEDLSSVRLETGQVEESRPQEQVQEEQKETPSVSQVQINETSKEEPKEQTATISNGIGATTDNNSELAVQFEELTSSTENNRLMTPEVPSPECEMEVTHNDDQQNPELIVSIPLDVLDEELQRRLCYTESHNCGGAAQASSDLKDDDVNNNANGENFHQSATEDSFNSTVALETKQIEADPGGGGGGVGGGEGVVDDDMESLQQLVHMPVEHHEDLHLTSTCATSMDFLAEFEKHCEKTLKLQTGPGTGPRELELAQAKQQMQVEMNDVETTLHGILNEMQDQHLYTPVCTQMDEFLTPADYAPLTEPETASPTPTSAAASPVLYEPDVVQQQQQHQEQQQQQHHEQQLQHQQHQHQQQQHQQQQHPQQQHQHQQQVHQQQQVFDSSNFSNELIGFQNDMPCFENIETSPESLAAQQSLHLELTQLLNDLQPPIGNVNNANGNQQHQQLQEQLQHQHQQLQQQQQEQHQQHQQQQQQLLQHAQATQQQQQSLQLQLQQETVNYDPLYPSPPAAATTPIPSNTANTVQLIQVPQQEALWQAQTTPHQTTHLQWSTVGGLESIKTMPVASLEGLENGAAATTTTYYINASDLYQTQLQQQTGGNLTGETYALLDNNENYMLEQQQQHQQHQQQQQQQQPIMILIQQPEMQQPVASASNPHQAPLHIAYAPQINNEMHEFQSQPQVQQQQQPQPQPQQQQQLQHSQPQQQLQQPHPQRPQHLKQQCSQQQQQPQQQQGQPQQQQQQQQVQKHTVLGLPKTSASPTRRSRAPVLRCRFCQNGPRFSSSLEYSHHIIELHPAESPFTCPHCPQTFASRNKRNQHILTAHVVQQFHCGQCSQMFPAQRALDLHLQRFHAPAGGADTAAANADGVRLEEVQLQLASKDVEQQQHHKLLLRQKLEHHQQQQSQPQQQQTQLSPPDVEQQTSPFQTRKTRILGCPDCEDCSQSTGHHHRKTQHYQELRNVPIPPTVPTPPSTIASLPSPNPQPLPMLSTPHITLPSPEQSEPDSTTATLRQFRKRCTLGGNSPSPTTTITTTAAANSAAAAAAAAAAATTLFMTSVASPSPSSSPSSSTMESSSGGGSVGGGSTAGSGTDSVSPPSANKLRGSHQCVMCEKKFTNMISLRKHQQLAHDSQTTMPWVCAICKRGYRKRTDMDNHMKSHEPKGRPYECNECWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGERGFQCEECDESFEYIKDLRKHRRSHKTELFYKCEHCPRTFLHFTSFRAHMNTHLPMGVFLNDKPTTPLIIKAENPATPQTIEELQPLTPLSNCNVNSGGEECPGSVEAVESSSVALPLEMIVDKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00471178;
90% Identity: -
80% Identity: -