Dpar001509.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila parthenogenetica
Gene Symbol
Mtf1
Assembly
GCA_035047505.1
Location
JAWNPM010000070.1:3216278-3223253[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.00014 0.011 16.4 1.9 1 23 364 388 364 388 0.99
2 6 0.00029 0.022 15.4 0.4 1 23 394 418 394 418 0.98
3 6 7.4e-05 0.0055 17.2 0.9 1 23 424 448 424 448 0.98
4 6 1.7e-07 1.3e-05 25.5 5.1 1 23 453 475 453 475 0.98
5 6 1.3e-06 9.6e-05 22.8 3.2 1 23 481 505 481 505 0.99
6 6 0.00016 0.012 16.2 3.7 1 23 511 535 511 535 0.95

Sequence Information

Coding Sequence
ATGGATTCAAGCAACGACGAGACGCTCagcgcacaacaacaacagcagcaacagcaacaacaatactaTGAACACAGTTGGAAGTCTGCGAATCATGGAAATTCCTTATCAGACAGCAGGGATTATGATACAAATTCGACGCGTACATCTTTGACTGGTTCGCCACCAATAACTGCGTCATCGCTGCAACTAGATTTCAATGGGTTTGAGGACAAAGCATTGCTGGCATCGTTGCTGGCGCCCAAATCGGATCCGGATGGCGGTGGCAGTggaagtagcagcagcatttATTCTGGCGAGCAACAGGTGCTGCAACCATTAGGCTTAAGTTTAACACTTAAGGCGGACGATGATGTGCTAGCGACGAGtagatcaacaacaacaacatacacGTTATACGGTGCACAGGAGGCACAGACACAGATTGTAGCATACAAGGACGATGACAACGACATCAATAACATGGACGACCTAGATGACGACGAAGTGTTCACATTAAGAccactgacaacaacaacaacaactgcaccCTTGTTGCTAACCAGCACTATTACAAACACAGCACCCTCGCCCCCGCACACACCAACACCCATACCCACAGTCACAAACATTTCATCACATCACACAATGCCCGCGGGAGCATCCACAACACAGACACAACCACCTATACCGATaccaataataacaacaacaacaatgggcgCATACAATCTGGACGACATTTGTTTTACACTGGAATATCAGTTTGAAAATCAAAAGCTTGTCCAGGTCCAGCCACCAACGGTGGTGTCCTTCAGTATGGTGCCAGCAACTGAAGatctaacaacaacaaccacagagATTAGCAGTGGTATTATgatgcagcagcaaaacaacaacaacataaacaactcAACATTATCCTCCGCATCAACTTCTCCTCCTACTGCATATTTCACACTTGGGACGAGCTTTATCGAAGAGCAGAATGAACCAGATGAAGACGATGAACTGGTTCACTGCATACACCCCGGCGCCTTGCATAAGGACACAGATGAGGATCAGCTGATGGCGATGGCGTACGAGAGCTCTGATGAAGCTCTGAGCCGTTATAAATGCAATTATGAGAACTGTTATCGCAGCTACAGTACAATTGGAAATCTGCGAACGCATTTAAAAACCCACACAGGCGATTACAGCTTCAAGTGCACGGAGGAGGGCTGCAACAAGGCGTTCCTTACATCCTACAGCCTGAAGATCCATGTGCGCGTCCACACCAAGGTGAAGCCCTACGAATGTGAAGTGAGTGGCTGTGATAAGGCGTTCAACACACGCTACAGATTGCACGCCCATCTACGTCTGCACAATGGCGAGACATTCAATTGTGAAATGTGCCAGAAATGTTTTACCACCTTGAGTGATCTTAAGAAGCATATGCGCACCCATACCCAGGAGCGTCCCTACAAATGCCCCGAGGACGATTGTGGTAAAGCGTTCACCGCTTCGCATCACCTGAAGACGCATCGTCGCACGCATACCGGTGAGAAGCCGTATCCATGTCAGGAGGATAGTTGTCAGAAATCTTTCAGTACCTCGCACAGTCTTAAGTCGCACAAGAAGACGCATCAGCGTCAAATGCTTAACAAGGGCAAGAAGAAAATGAAACGAGCACAAAAACAGctccagcaacagcagcagcaggaacaggagACGCAGCAGCATCCGGAAGTGGAGGAGCAACAGGGTCGTGTGAAATCCGAAGTGGAAGTAACAGATATGGTGCTACTTAATCCTGGAAGTCAGAGCTCCGAGACCACAAGCAATGACAGCGGCGTTGTGTTGCAGCAAGTGTCCAATGTTTACATGTTGCCAGAGACATCTCAGGCCTATCCATTGTCTTATGCCGCCGAGGAGGAGATACCCAGTCCTTGGATCGACGCTGGAGTGCTTGTTTCCAAGCCCATTATGGCCATGGCACCGTTGACGGACGCCTGCGTTGCTTTACCCACGGAAATGCCCAGTTTTGTGGATCTGAAGCAGAACTTTGGGAATGCCATCAGTGGCAACATGGATGATTTGTCCACATTAGATGTGGAAATGTTGAGCGgcacacaaaataataatccAACTTCGGCGTTACCCACACTCGAGCTTAATCCGCAAAATATTGAGGAGCTGCTCAAGGATGATAGCTTCGATAATGATGAGGACATGGAGACAGAGTCTTTGCTCAACGATATACTTATGACCattgacaacaacagcgcTCTGCTTCAAGCAACGCTGCAGCAGGCTTCCCAAGTGCCTAGTGATGCCTCCGGCTTGGTGGAGCTGGACATCAGGGATAACAAGCCGACGCTCAAACAAATCACAGCAGATGCGGGCATCTGCAATTGCACCAATTGCAAGTGTGATCAAACCAAGAGTTGTCACAGTGGTGACTGTGGGGGTGCTGCCTCTTCTGCTCAAGGTGCACCTGGTGCAGTGGTTAAATCCATTAAacccaccacaacaacaacaatcgccaATGGTGGATCTGGTGGCAAAAGGATCTGTGGCAGCACTGTTAGTAAAAAAGTGAGTAAACGCGAAGCGGAAATGAATCAAAACATCGAGGATGTTGCTTTGCTCTTACAAAATCTGGCTTCCATGagtggcggcagcagcagctcggCCAGCGGCACCGGTGGTTGCTGTGGCAGCAAGCCAGTGGCACCACCGCCAGCCACCAGTGGCTGTGGGTGCTCCTCCAAGCCAGTACCGGCAACAGGTGGTTGCTGTGGTGGTGCAACAGCTGCACCAGTGCCGCCTACTAGCGGTGGCTGCTGTTCTGGCAATAAACCTGTTGCCCCACCAGTTGCCAGTGGCTGCTGTTCACCTGCGCCCGCTGTGACAACCTCCGGCTGCTGCTCCAACAAACCACCGCCGCCGGCCGTCGTCAGTAGTAGCAGTGGTGGCGGTGGAGGAATCAAAGGCAGCTCCTGCACCTGTAAGAGTCCGGCGGAGGGCGTGGCCAATGGTTGTTGTGTCGTCATCTGCATGAAAACGCTGCAAGCCTTGCGCAAAGTGCTCACTCGCCGTAACCTCAACTTAATGCTTTGCCCGCAGCAGAGTTAA
Protein Sequence
MDSSNDETLSAQQQQQQQQQQYYEHSWKSANHGNSLSDSRDYDTNSTRTSLTGSPPITASSLQLDFNGFEDKALLASLLAPKSDPDGGGSGSSSSIYSGEQQVLQPLGLSLTLKADDDVLATSRSTTTTYTLYGAQEAQTQIVAYKDDDNDINNMDDLDDDEVFTLRPLTTTTTTAPLLLTSTITNTAPSPPHTPTPIPTVTNISSHHTMPAGASTTQTQPPIPIPIITTTTMGAYNLDDICFTLEYQFENQKLVQVQPPTVVSFSMVPATEDLTTTTTEISSGIMMQQQNNNNINNSTLSSASTSPPTAYFTLGTSFIEEQNEPDEDDELVHCIHPGALHKDTDEDQLMAMAYESSDEALSRYKCNYENCYRSYSTIGNLRTHLKTHTGDYSFKCTEEGCNKAFLTSYSLKIHVRVHTKVKPYECEVSGCDKAFNTRYRLHAHLRLHNGETFNCEMCQKCFTTLSDLKKHMRTHTQERPYKCPEDDCGKAFTASHHLKTHRRTHTGEKPYPCQEDSCQKSFSTSHSLKSHKKTHQRQMLNKGKKKMKRAQKQLQQQQQQEQETQQHPEVEEQQGRVKSEVEVTDMVLLNPGSQSSETTSNDSGVVLQQVSNVYMLPETSQAYPLSYAAEEEIPSPWIDAGVLVSKPIMAMAPLTDACVALPTEMPSFVDLKQNFGNAISGNMDDLSTLDVEMLSGTQNNNPTSALPTLELNPQNIEELLKDDSFDNDEDMETESLLNDILMTIDNNSALLQATLQQASQVPSDASGLVELDIRDNKPTLKQITADAGICNCTNCKCDQTKSCHSGDCGGAASSAQGAPGAVVKSIKPTTTTTIANGGSGGKRICGSTVSKKVSKREAEMNQNIEDVALLLQNLASMSGGSSSSASGTGGCCGSKPVAPPPATSGCGCSSKPVPATGGCCGGATAAPVPPTSGGCCSGNKPVAPPVASGCCSPAPAVTTSGCCSNKPPPPAVVSSSSGGGGGIKGSSCTCKSPAEGVANGCCVVICMKTLQALRKVLTRRNLNLMLCPQQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00529092;
90% Identity
iTF_00478989;
80% Identity
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